RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 LUC7L2Q9Y383 392 aaKnown RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 NOP56O00567 594 aaKnown RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 NEMFO60524 1076 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 ALDH1B1P30837 517 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 PPM1FP49593 454 aaPredicted RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 GSDMDP57764 484 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 MRPS25P82663 173 aaKnown RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 PABPC4Q13310 644 aaKnown RBP eCLIP4.26□□□□□ -1.73
LTN1-207ENST00000614971 PHLDB2Q86SQ0 1253 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.26□□□□□ -1.73
LTN1-207ENST00000614971 EHMT1Q9H9B1 1298 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 ARHGEF10LQ9HCE6 1279 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 PCDHB6Q9Y5E3 794 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 CPS1P31327 1500 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 ERLIN1O75477 346 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 WDHD1O75717 1129 aaPredicted RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 CCDC122Q5T0U0 273 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 LEKR1Q6ZMV7 388 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 CYB5R4Q7L1T6 521 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 CABP7Q86V35 215 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 FBXO18Q8NFZ0 1043 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 SYMPKQ92797 1274 aaKnown RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 MAP7D2Q96T17 732 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 PAIP2Q9BPZ3 127 aaKnown RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 CSRNP2Q9H175 543 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 MRPL44Q9H9J2 332 aaKnown RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 PCDHA5Q9Y5H7 936 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 NEDD4P46934 1319 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 ERLIN2O94905 339 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 ABCB4P21439 1286 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 CNGA1P29973 690 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 SLFN13Q68D06 897 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 PTF1AQ7RTS3 328 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 GLG1Q92896 1179 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 CLSTN2Q9H4D0 955 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 SENP2Q9HC62 589 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 E9PCH4 1651 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 SYNRGQ9UMZ2 1314 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 LRRC7Q96NW7 1537 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 H7C1D1 291 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 FGFR1OPO95684 399 aaKnown RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 KRT19P08727 400 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 PDIA4P13667 645 aaKnown RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 LMAN1P49257 510 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 ITPK1Q13572 414 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 FAM47CQ5HY64 1035 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 NEK11Q8NG66 645 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 JAKMIP2Q96AA8 810 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 BAG1Q99933 345 aaPredicted RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 KANSL2Q9H9L4 492 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 STAP2Q9UGK3 403 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 ARHGEF35A5YM69 484 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 H7C1W4 665 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 PDE6BP35913 854 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 C11orf57Q6ZUT1 292 aaPredicted RBP4.25□□□□□ -1.73
LTN1-207ENST00000614971 NCAPG2Q86XI2 1143 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 BLIDQ8IZY5 108 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 NLGN1Q8N2Q7 840 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 OXER1Q8TDS5 423 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 RBM28Q9NW13 759 aaKnown RBP4.25□□□□□ -1.73
LTN1-207ENST00000614971 RMND1Q9NWS8 449 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 PCDHA12Q9UN75 941 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 KNL1Q8NG31 2342 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 XDHP47989 1333 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 SCG2P13521 617 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 IRX3P78415 501 aaPredicted RBP4.25□□□□□ -1.73
LTN1-207ENST00000614971 UTP14CQ5TAP6 766 aaKnown RBP4.25□□□□□ -1.73
LTN1-207ENST00000614971 TYW1BQ6NUM6 668 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 NELFBQ8WX92 580 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 TRPM1Q7Z4N2 1603 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 PP2D1A8MPX8 630 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 GH2P01242 217 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 DLATP10515 647 aaKnown RBP4.25□□□□□ -1.73
LTN1-207ENST00000614971 KIF5AQ12840 1032 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 NECTIN1Q15223 517 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 ABCB5Q2M3G0 1257 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.25□□□□□ -1.732e-6■■■□□ 16.7
LTN1-207ENST00000614971 TMOD4Q9NZQ9 345 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 SERPINB13Q9UIV8 391 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 CARMIL3Q8ND23 1372 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 RP1L1Q8IWN7 2480 aaPredicted RBP4.25□□□□□ -1.73
LTN1-207ENST00000614971 USP17L15C9J2P7 530 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 USP17L13C9JLJ4 530 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 USP17L11C9JVI0 530 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 USP17L18D6R9N7 530 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 USP17L22D6RA61 530 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 USP17L17D6RBQ6 530 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 USP17L19D6RCP7 530 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 USP17L20D6RJB6 530 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 PFKFB2O60825 505 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 GAS7O60861 476 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 ATP1A3P13637 1013 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 USP17L24Q0WX57 530 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 PPP2R5DQ14738 602 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 USP17L6PQ6QN14 398 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 DNAJC5Q9H3Z4 198 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 USTQ9Y2C2 406 aa4.25□□□□□ -1.73
LTN1-207ENST00000614971 PRRC2BQ5JSZ5 2229 aaKnown RBP4.25□□□□□ -1.73
LTN1-207ENST00000614971 ABCA6Q8N139 1617 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms