RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 ZKSCAN4Q969J2 545 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-212ENST00000613856 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-212ENST00000613856 TCEANC2Q96MN5 208 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 CPA4Q9UI42 421 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 LIMCH1Q9UPQ0 1083 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 PLIN4Q96Q06 1357 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 SPDYE5A6NIY4 337 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 SH2B2O14492 632 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-212ENST00000613856 IRF6O14896 467 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 TNNI2P48788 182 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 CDK8P49336 464 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 GTF2A2P52657 109 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 EVCP57679 992 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 SH3BP5LQ7L8J4 393 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 NKX2-3Q8TAU0 364 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 DYNLL2Q96FJ2 89 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 TRIM47Q96LD4 638 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 INCENPQ9NQS7 918 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 SH2B1Q9NRF2 756 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-212ENST00000613856 TOMM22Q9NS69 142 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 ZSWIM5Q9P217 1185 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 PI4KBQ9UBF8 816 aa13.43□□□□□ -0.26
SLIRP-212ENST00000613856 DDTLA6NHG4 134 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-212ENST00000613856 RASA1P20936 1047 aa13.42□□□□□ -0.26
SLIRP-212ENST00000613856 LIFRP42702 1097 aa13.42□□□□□ -0.26
SLIRP-212ENST00000613856 TCP10Q12799 353 aa13.42□□□□□ -0.26
SLIRP-212ENST00000613856 CUL4AQ13619 759 aa13.42□□□□□ -0.26
SLIRP-212ENST00000613856 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
SLIRP-212ENST00000613856 RRP12Q5JTH9 1297 aaKnown RBP13.42□□□□□ -0.26
SLIRP-212ENST00000613856 ZFPM1Q8IX07 1006 aa13.42□□□□□ -0.26
SLIRP-212ENST00000613856 BRF1Q92994 677 aa13.42□□□□□ -0.26
SLIRP-212ENST00000613856 TMX3Q96JJ7 454 aa13.42□□□□□ -0.26
SLIRP-212ENST00000613856 DAXXQ9UER7 740 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-212ENST00000613856 RANBP6O60518 1105 aaKnown RBP13.41□□□□□ -0.26
SLIRP-212ENST00000613856 PRDM1O75626 825 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 OSBPP22059 807 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 FGD1P98174 961 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 CCDC178Q5BJE1 867 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 C17orf99Q6UX52 265 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 CHST3Q7LGC8 479 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 SGMS1Q86VZ5 419 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 IQCA1Q86XH1 822 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 FOXP4Q8IVH2 680 aaPredicted RBP13.41□□□□□ -0.26
SLIRP-212ENST00000613856 STK11IPQ8N1F8 1099 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 SLC44A5Q8NCS7 719 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 IGDCC4Q8TDY8 1250 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 UBAC1Q9BSL1 405 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 LRRC2Q9BYS8 371 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 LY9Q9HBG7 655 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 MKNK2Q9HBH9 465 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 TCP11L1Q9NUJ3 509 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 HERC5Q9UII4 1024 aaKnown RBP13.41□□□□□ -0.26
SLIRP-212ENST00000613856 TPCN1Q9ULQ1 816 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 CSADQ9Y600 493 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 NID2Q14112 1375 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 ATAD5Q96QE3 1844 aa13.41□□□□□ -0.26
SLIRP-212ENST00000613856 ADGRA2Q96PE1 1338 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 ERICH2A1L162 156 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 TSPY2A6NKD2 308 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 IFIT3O14879 490 aaKnown RBP13.4□□□□□ -0.26
SLIRP-212ENST00000613856 CCL5P13501 91 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 SHMT1P34896 483 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 PSMC4P43686 418 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 SEC23AQ15436 765 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 TMEM67Q5HYA8 995 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 ZSCAN29Q8IWY8 852 aaPredicted RBP13.4□□□□□ -0.26
SLIRP-212ENST00000613856 ZNF444Q8N0Y2 327 aaPredicted RBP13.4□□□□□ -0.26
SLIRP-212ENST00000613856 ZNF274Q96GC6 653 aaPredicted RBP13.4□□□□□ -0.26
SLIRP-212ENST00000613856 WRNIP1Q96S55 665 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 DNAJC18Q9H819 358 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 SRRDQ9UH36 339 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 MYH4Q9Y623 1939 aa13.4□□□□□ -0.26
SLIRP-212ENST00000613856 TNKSO95271 1327 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 TBC1D12O60347 775 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 LARGE1O95461 756 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 INPP5BP32019 993 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 GJA8P48165 433 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 RCAN1P53805 252 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 WTAPQ15007 396 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 ME3Q16798 604 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 TATDN1Q6P1N9 297 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 NOL8Q76FK4 1167 aaKnown RBP13.39□□□□□ -0.27
SLIRP-212ENST00000613856 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 CRACR2BQ8N4Y2 399 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-212ENST00000613856 NEDD1Q8NHV4 660 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 INTS4Q96HW7 963 aaKnown RBP13.39□□□□□ -0.27
SLIRP-212ENST00000613856 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-212ENST00000613856 GABRQQ9UN88 632 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 UNC80Q8N2C7 3258 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 DOCK3Q8IZD9 2030 aa13.39□□□□□ -0.27
SLIRP-212ENST00000613856 PFKFB2O60825 505 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 TSPY3P0CV98 308 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 TSPY8P0CW00 308 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 CETPP11597 493 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 GRK4P32298 578 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 NOVP48745 357 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms