RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 PTPDC1A2A3K4 754 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 ASNSP08243 561 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 DDX11Q96FC9 970 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 CDCA5Q96FF9 252 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 NMRK2Q9NPI5 230 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 GINM1Q9NU53 330 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 RBM28Q9NW13 759 aaKnown RBP16.03■□□□□ 0.16
TMEM254-213ENST00000613758 FZD1Q9UP38 647 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 PPFIA3O75145 1194 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 CDKL5O76039 1030 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 INPP5BP32019 993 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 PRKG1Q13976 671 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 NTRK3Q16288 839 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 WRNIP1Q96S55 665 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 SSC5DA1L4H1 1573 aa16.03■□□□□ 0.16
TMEM254-213ENST00000613758 USP2O75604 605 aaPredicted RBP16.02■□□□□ 0.16
TMEM254-213ENST00000613758 KIF5BP33176 963 aa16.02■□□□□ 0.16
TMEM254-213ENST00000613758 HMGN5P82970 282 aaKnown RBP16.02■□□□□ 0.16
TMEM254-213ENST00000613758 GRM4Q14833 912 aa16.02■□□□□ 0.16
TMEM254-213ENST00000613758 CLEC17AQ6ZS10 378 aa16.02■□□□□ 0.16
TMEM254-213ENST00000613758 KLRG1Q96E93 195 aa16.02■□□□□ 0.16
TMEM254-213ENST00000613758 IFNAR1P17181 557 aa16.02■□□□□ 0.15
TMEM254-213ENST00000613758 NF2P35240 595 aa16.02■□□□□ 0.15
TMEM254-213ENST00000613758 MAP1SQ66K74 1059 aaPredicted RBP16.02■□□□□ 0.15
TMEM254-213ENST00000613758 ARHGEF10LQ9HCE6 1279 aa16.02■□□□□ 0.15
TMEM254-213ENST00000613758 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.02■□□□□ 0.15
TMEM254-213ENST00000613758 USP17L5A8MUK1 530 aa16.01■□□□□ 0.15
TMEM254-213ENST00000613758 PPP1R12BO60237 982 aaPredicted RBP16.01■□□□□ 0.15
TMEM254-213ENST00000613758 CMTR1Q8N1G2 835 aaKnown RBP16.01■□□□□ 0.15
TMEM254-213ENST00000613758 ZKSCAN4Q969J2 545 aaPredicted RBP16.01■□□□□ 0.15
TMEM254-213ENST00000613758 MAD2L2Q9UI95 211 aa16.01■□□□□ 0.15
TMEM254-213ENST00000613758 A0A1W2PRG0 241 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 PLEKHA8P1O95397 391 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 BRD1O95696 1058 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 PDHBP11177 359 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 USP17L2Q6R6M4 530 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 TMTC3Q6ZXV5 915 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 LDHDQ86WU2 507 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 SCYL3Q8IZE3 742 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 STAG2Q8N3U4 1231 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 CCDC82Q8N4S0 544 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 FAM184AQ8NB25 1140 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 ACER1Q8TDN7 264 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 PHKBQ93100 1093 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 ORC3Q9UBD5 711 aaPredicted RBP16■□□□□ 0.15
TMEM254-213ENST00000613758 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
TMEM254-213ENST00000613758 PARP1P09874 1014 aaKnown RBP16■□□□□ 0.15
TMEM254-213ENST00000613758 FDPSP14324 419 aaKnown RBP16■□□□□ 0.15
TMEM254-213ENST00000613758 GNAQP50148 359 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 SSRP1Q08945 709 aaKnown RBP16■□□□□ 0.15
TMEM254-213ENST00000613758 RASGRP2Q7LDG7 609 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 CCDC84Q86UT8 332 aaPredicted RBP16■□□□□ 0.15
TMEM254-213ENST00000613758 SYNPO2Q9UMS6 1093 aa16■□□□□ 0.15
TMEM254-213ENST00000613758 RAD21O60216 631 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 GOLGA8HP0CJ92 632 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 SNHG28P0DPA3 235 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 ECE1P42892 770 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 MAP3K9P80192 1104 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 NBPF11Q86T75 865 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 SRBD1Q8N5C6 995 aaKnown RBP15.99■□□□□ 0.15
TMEM254-213ENST00000613758 GMCL1P1Q8NEA9 526 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.99■□□□□ 0.15
TMEM254-213ENST00000613758 SLC26A6Q9BXS9 759 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 PICK1Q9NRD5 415 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 TMX2Q9Y320 296 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 F5H6K3 240 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 FMNL1O95466 1100 aaPredicted RBP15.99■□□□□ 0.15
TMEM254-213ENST00000613758 SYT1P21579 422 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 KLRC3Q07444 240 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 FUT2Q10981 343 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 LARP1BQ659C4 914 aaKnown RBP15.99■□□□□ 0.15
TMEM254-213ENST00000613758 SLFN13Q68D06 897 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 KIF3AQ9Y496 699 aa15.99■□□□□ 0.15
TMEM254-213ENST00000613758 KLRF2D3W0D1 207 aa15.98■□□□□ 0.15
TMEM254-213ENST00000613758 BAG4O95429 457 aaKnown RBP15.98■□□□□ 0.15
TMEM254-213ENST00000613758 PDCP20941 246 aa15.98■□□□□ 0.15
TMEM254-213ENST00000613758 IREB2P48200 963 aaKnown RBP15.98■□□□□ 0.15
TMEM254-213ENST00000613758 NOL9Q5SY16 702 aaKnown RBP15.98■□□□□ 0.15
TMEM254-213ENST00000613758 TRIM22Q8IYM9 498 aa15.98■□□□□ 0.15
TMEM254-213ENST00000613758 GBP4Q96PP9 640 aa15.98■□□□□ 0.15
TMEM254-213ENST00000613758 LZTS2Q9BRK4 669 aa15.98■□□□□ 0.15
TMEM254-213ENST00000613758 SH2D4AQ9H788 454 aa15.98■□□□□ 0.15
TMEM254-213ENST00000613758 MYH4Q9Y623 1939 aa15.98■□□□□ 0.15
TMEM254-213ENST00000613758 FRMPD2Q68DX3 1309 aaPredicted RBP15.97■□□□□ 0.15
TMEM254-213ENST00000613758 TRAF5O00463 557 aa15.97■□□□□ 0.15
TMEM254-213ENST00000613758 TTLL12Q14166 644 aaPredicted RBP15.97■□□□□ 0.15
TMEM254-213ENST00000613758 ASPRV1Q53RT3 343 aa15.97■□□□□ 0.15
TMEM254-213ENST00000613758 DCAF4Q8WV16 495 aa15.97■□□□□ 0.15
TMEM254-213ENST00000613758 TCHHQ07283 1943 aa15.97■□□□□ 0.15
TMEM254-213ENST00000613758 STK36Q9NRP7 1315 aa15.97■□□□□ 0.15
TMEM254-213ENST00000613758 NDUFB10O96000 172 aa15.97■□□□□ 0.15
TMEM254-213ENST00000613758 PTPRAP18433 802 aa15.97■□□□□ 0.15
TMEM254-213ENST00000613758 ZNF543Q08ER8 600 aa15.97■□□□□ 0.15
TMEM254-213ENST00000613758 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.97■□□□□ 0.15
TMEM254-213ENST00000613758 RNF26Q9BY78 433 aaPredicted RBP15.97■□□□□ 0.15
TMEM254-213ENST00000613758 GOPCQ9HD26 462 aa15.97■□□□□ 0.15
TMEM254-213ENST00000613758 GPCPD1Q9NPB8 672 aa15.97■□□□□ 0.15
TMEM254-213ENST00000613758 V9GY48 417 aaPredicted RBP15.97■□□□□ 0.15
TMEM254-213ENST00000613758 PRPF3O43395 683 aaKnown RBP15.96■□□□□ 0.15
TMEM254-213ENST00000613758 STX6O43752 255 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms