RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	C12orf60	Q5U649	245 aa		13.43	□□□□□ -0.26
CBWD1-222	ENST00000613508	MFSD14C	Q5VZR4	134 aa		13.43	□□□□□ -0.26
CBWD1-222	ENST00000613508	MB21D1	Q8N884	522 aa		13.43	□□□□□ -0.26
CBWD1-222	ENST00000613508	SHCBP1	Q8NEM2	672 aa		13.43	□□□□□ -0.26
CBWD1-222	ENST00000613508	CCDC17	Q96LX7	622 aa		13.43	□□□□□ -0.26
CBWD1-222	ENST00000613508	BOLA2	Q9H3K6	86 aa		13.43	□□□□□ -0.26
CBWD1-222	ENST00000613508	TMX2	Q9Y320	296 aa		13.43	□□□□□ -0.26
CBWD1-222	ENST00000613508	PFAS	O15067	1338 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508		A0A0G2JMZ2	1700 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508		A0A0C4DFX4	3053 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	ZNF236	Q9UL36	1845 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	MPHOSPH10	O00566	681 aa	Known RBP	13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	PRKAB2	O43741	272 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	STRN	O43815	780 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	CCND3	P30281	292 aa	Predicted RBP	13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	SLC44A5	Q8NCS7	719 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	LRRCC1	Q9C099	1032 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	SH2D4A	Q9H788	454 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	CWC22	Q9HCG8	908 aa	Known RBP	13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	STAP2	Q9UGK3	403 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	IVNS1ABP	Q9Y6Y0	642 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	RLF	Q13129	1914 aa		13.42	□□□□□ -0.26
CBWD1-222	ENST00000613508	MSC	O60682	206 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	SLFNL1	Q499Z3	407 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	KIAA1755	Q5JYT7	1200 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	OLFML2B	Q68BL8	750 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	ZSCAN25	Q6NSZ9	544 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	C16orf86	Q6ZW13	317 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	C7orf61	Q8IZ16	206 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	ABRA	Q8N0Z2	381 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	DYNLL2	Q96FJ2	89 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	SPATC1L	Q9H0A9	340 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	ARHGEF10L	Q9HCE6	1279 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	FLRT1	Q9NZU1	646 aa		13.41	□□□□□ -0.26
CBWD1-222	ENST00000613508	USP17L12	C9JPN9	530 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	USP17L21	D6R901	530 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	AKR1B1	P15121	316 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	DSG3	P32926	999 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	CDK8	P49336	464 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	ATP2B2	Q01814	1243 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	ICA1	Q05084	483 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	C20orf194	Q5TEA3	1177 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	WDR78	Q5VTH9	848 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	AMOTL1	Q8IY63	956 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	DDRGK1	Q96HY6	314 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	TANGO6	Q9C0B7	1094 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	MROH8	Q9H579	483 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	VCPKMT	Q9H867	229 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	ECHDC1	Q9NTX5	307 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	ADAMTS5	Q9UNA0	930 aa		13.4	□□□□□ -0.26
CBWD1-222	ENST00000613508	WDR46	O15213	610 aa	Known RBP	13.39	□□□□□ -0.27
CBWD1-222	ENST00000613508	GPR153	Q6NV75	609 aa		13.39	□□□□□ -0.27
CBWD1-222	ENST00000613508	GIMAP6	Q6P9H5	292 aa		13.39	□□□□□ -0.27
CBWD1-222	ENST00000613508	NPLOC4	Q8TAT6	608 aa		13.39	□□□□□ -0.27
CBWD1-222	ENST00000613508	KANSL2	Q9H9L4	492 aa		13.39	□□□□□ -0.27
CBWD1-222	ENST00000613508	DDX20	Q9UHI6	824 aa	Known RBP	13.39	□□□□□ -0.27
CBWD1-222	ENST00000613508	CYP2D7	A0A087X1C5	515 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	SMIM22	K7EJ46	135 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	FLOT1	O75955	427 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	CHGB	P05060	677 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	CYBA	P13498	195 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	ERCC3	P19447	782 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	ADORA2A	P29274	412 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	SBK1	Q52WX2	424 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	CTR9	Q6PD62	1173 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	DPP9	Q86TI2	863 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	CLEC10A	Q8IUN9	316 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	TRPV1	Q8NER1	839 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	STRBP	Q96SI9	672 aa	Known RBP	13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	PUS7L	Q9H0K6	701 aa	Known RBP	13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	DCTPP1	Q9H773	170 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	SLC4A4	Q9Y6R1	1079 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	MYH7	P12883	1935 aa		13.38	□□□□□ -0.27
CBWD1-222	ENST00000613508	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	FRMPD3	Q5JV73	1810 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	ROBO3	Q96MS0	1386 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	DNM1L	O00429	736 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	SOX1	O00570	391 aa	Predicted RBP	13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	EEF2	P13639	858 aa	Known RBP	13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	CYP2C19	P33261	490 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	MAGEA10	P43363	369 aa	Predicted RBP	13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	LRRC26	Q2I0M4	334 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	LRIT3	Q3SXY7	679 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	SPICE1	Q8N0Z3	855 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	KBTBD3	Q8NAB2	608 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	ATG4C	Q96DT6	458 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	SLC5A4	Q9NY91	659 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	MYH8	P13535	1937 aa		13.37	□□□□□ -0.27
CBWD1-222	ENST00000613508	SMARCA5	O60264	1052 aa	Predicted RBP	13.36	□□□□□ -0.27
CBWD1-222	ENST00000613508	COBL	O75128	1261 aa		13.36	□□□□□ -0.27
CBWD1-222	ENST00000613508	SLC25A27	O95847	323 aa		13.36	□□□□□ -0.27
CBWD1-222	ENST00000613508	TMEM132B	Q14DG7	1078 aa		13.36	□□□□□ -0.27
CBWD1-222	ENST00000613508	GPATCH3	Q96I76	525 aa		13.36	□□□□□ -0.27
CBWD1-222	ENST00000613508	BCL11A	Q9H165	835 aa		13.36	□□□□□ -0.27
CBWD1-222	ENST00000613508	GOPC	Q9HD26	462 aa		13.36	□□□□□ -0.27
CBWD1-222	ENST00000613508	PARP14	Q460N5	1801 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms