RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PICALMQ13492 652 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 RTN1Q16799 776 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 RSBN1LQ6PCB5 846 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 CATIPQ7Z7H3 387 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 NIM1KQ8IY84 436 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 ZNF654Q8IZM8 581 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 FANCBQ8NB91 859 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 MYL10Q9BUA6 226 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 TAOK3Q9H2K8 898 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 TCP11L1Q9NUJ3 509 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 ORC3Q9UBD5 711 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 ZNRF3Q9ULT6 936 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 TCHHQ07283 1943 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 PSME4Q14997 1843 aa10.38□□□□□ -0.75
CCDC47-207ENST00000612558 BRCA1P38398 1863 aaKnown RBP10.38□□□□□ -0.75
CCDC47-207ENST00000612558 PRPF40AO75400 957 aaKnown RBP10.38□□□□□ -0.75
CCDC47-207ENST00000612558 IFNAR1P17181 557 aa10.38□□□□□ -0.75
CCDC47-207ENST00000612558 CDK8P49336 464 aa10.38□□□□□ -0.75
CCDC47-207ENST00000612558 NTRK3Q16288 839 aa10.38□□□□□ -0.75
CCDC47-207ENST00000612558 DGKHQ86XP1 1220 aa10.38□□□□□ -0.75
CCDC47-207ENST00000612558 CCDC144CPQ8IYA2 1237 aa10.38□□□□□ -0.75
CCDC47-207ENST00000612558 ANKS1AQ92625 1134 aa10.38□□□□□ -0.75
CCDC47-207ENST00000612558 OSBPL5Q9H0X9 879 aaPredicted RBP10.38□□□□□ -0.75
CCDC47-207ENST00000612558 ZSCAN16Q9H4T2 348 aaPredicted RBP10.38□□□□□ -0.75
CCDC47-207ENST00000612558 DDX4Q9NQI0 724 aaKnown RBP10.38□□□□□ -0.75
CCDC47-207ENST00000612558 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
CCDC47-207ENST00000612558 DDX60LQ5H9U9 1706 aaKnown RBP10.38□□□□□ -0.75
CCDC47-207ENST00000612558 FER1L6Q2WGJ9 1857 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 PSMD14O00487 310 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 NMT2O60551 498 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 RAD17O75943 681 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 DDAH1O94760 285 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 TSPY3P0CV98 308 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 TSPY8P0CW00 308 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 RASA1P20936 1047 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 FOXD4L6Q3SYB3 417 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-207ENST00000612558 CFAP100Q494V2 611 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 FOXD4L3Q6VB84 417 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-207ENST00000612558 SLC44A5Q8NCS7 719 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 NUP133Q8WUM0 1156 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 CHAMP1Q96JM3 812 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 GMLQ99445 158 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 IDI2Q9BXS1 227 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 HDAC9Q9UKV0 1011 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 BCS1LQ9Y276 419 aa10.37□□□□□ -0.75
CCDC47-207ENST00000612558 GFRA3O60609 400 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 PPFIA3O75145 1194 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 HLA-DOAP06340 250 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 GABPAQ06546 454 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 SSRP1Q08945 709 aaKnown RBP10.36□□□□□ -0.75
CCDC47-207ENST00000612558 TROAPQ12815 778 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 CSPP1Q1MSJ5 1256 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 FERMT3Q86UX7 667 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 OGFOD1Q8N543 542 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 TMEM87AQ8NBN3 555 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 AGBL3Q8NEM8 1001 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 NEDD1Q8NHV4 660 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 JDP2Q8WYK2 163 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 WASF1Q92558 559 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 C8orf76Q96K31 380 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 DHX36Q9H2U1 1008 aaKnown RBP10.36□□□□□ -0.75
CCDC47-207ENST00000612558 IL17RBQ9NRM6 502 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 RBM28Q9NW13 759 aaKnown RBP10.36□□□□□ -0.75
CCDC47-207ENST00000612558 SWAP70Q9UH65 585 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 ECM29Q5VYK3 1845 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 STK36Q9NRP7 1315 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 LTBP3Q9NS15 1303 aa10.36□□□□□ -0.75
CCDC47-207ENST00000612558 NFKBIEO00221 500 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 FMNL1O95466 1100 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-207ENST00000612558 NCLP19338 710 aaKnown RBP10.35□□□□□ -0.75
CCDC47-207ENST00000612558 PRSS12P56730 875 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 DNM1Q05193 864 aaKnown RBP10.35□□□□□ -0.75
CCDC47-207ENST00000612558 NFIAQ12857 509 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 RESTQ13127 1097 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 KLHL40Q2TBA0 621 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 RCSD1Q6JBY9 416 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 CRACR2BQ8N4Y2 399 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-207ENST00000612558 FBXO18Q8NFZ0 1043 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 PHKBQ93100 1093 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 EHD4Q9H223 541 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 KAT14Q9H8E8 782 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 SPON1Q9HCB6 807 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 SERPINB13Q9UIV8 391 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 CNPY2Q9Y2B0 182 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 PCDHAC2Q9Y5I4 1007 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 DDX49Q9Y6V7 483 aaKnown RBP10.35□□□□□ -0.75
CCDC47-207ENST00000612558 COL4A5P29400 1685 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 ADAMTSL1Q8N6G6 1762 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 GOLGB1Q14789 3259 aaKnown RBP10.35□□□□□ -0.75
CCDC47-207ENST00000612558 KRT85P78386 507 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 CXCL9Q07325 125 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
CCDC47-207ENST00000612558 NBPF11Q86T75 865 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 USP48Q86UV5 1035 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 CTCFLQ8NI51 663 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-207ENST00000612558 PRMT6Q96LA8 375 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-207ENST00000612558 MAP3K14Q99558 947 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms