RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 COBLO75128 1261 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 UQCRFS1P1P0C7P4 283 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 ZYXQ15942 572 aaKnown RBP12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 ANO1Q5XXA6 986 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 DPP9Q86TI2 863 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 ABRAQ8N0Z2 381 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 FERMT2Q96AC1 680 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 TIFAQ96CG3 184 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 NEUROD6Q96NK8 337 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 ASB2Q96Q27 587 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 MEIS3Q99687 375 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 MOV10L1Q9BXT6 1211 aaKnown RBP12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 RPAP3Q9H6T3 665 aaPredicted RBP12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 NRBP1Q9UHY1 535 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 MYH8P13535 1937 aa12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 TCF20Q9UGU0 1960 aaKnown RBP12.09□□□□□ -0.47
PPARGC1A-216ENST00000612355 E9PSI1 815 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 SRGAP3O43295 1099 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 RAG1P15918 1043 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 GORABQ5T7V8 394 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 RASIP1Q5U651 963 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 ANKRD33Q7Z3H0 272 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 ACER1Q8TDN7 264 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 ADAMTS19Q8TE59 1207 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 TOX2Q96NM4 488 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 SPATC1LQ9H0A9 340 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 SERPINB13Q9UIV8 391 aa12.08□□□□□ -0.48
PPARGC1A-216ENST00000612355 PRRC2BQ5JSZ5 2229 aaKnown RBP12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 ERCC3P19447 782 aa12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 MAP3K12Q12852 859 aa12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 MB21D1Q8N884 522 aa12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 UHRF1Q96T88 793 aaPredicted RBP12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 GAS2L1Q99501 681 aaPredicted RBP12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 SMC4Q9NTJ3 1288 aa12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 SLC5A4Q9NY91 659 aa12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 SAP30BPQ9UHR5 308 aaKnown RBP12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 ARIH1Q9Y4X5 557 aaPredicted RBP12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 SYNGAP1Q96PV0 1343 aa12.07□□□□□ -0.48
PPARGC1A-216ENST00000612355 A0A1W2PQ45 241 aaPredicted RBP12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 A0A1W2PQY0 241 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 PQBP1O60828 265 aaKnown RBP12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 CYP2E1P05181 493 aaPredicted RBP12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 RARBP10826 455 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 GUCY1A2P33402 732 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 MRPS5P82675 430 aaKnown RBP12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 COG2Q14746 738 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 RAB3GAP1Q15042 981 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 ABCB5Q2M3G0 1257 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 CERS3Q8IU89 383 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 MAML3Q96JK9 1138 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 PBX4Q9BYU1 374 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 MROH8Q9H579 483 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 XPNPEP3Q9NQH7 507 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 HOXC10Q9NYD6 342 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 TBX21Q9UL17 535 aa12.06□□□□□ -0.48
PPARGC1A-216ENST00000612355 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
PPARGC1A-216ENST00000612355 SHMT1P34896 483 aa12.05□□□□□ -0.48
PPARGC1A-216ENST00000612355 FAAP100Q0VG06 881 aa12.05□□□□□ -0.48
PPARGC1A-216ENST00000612355 CERKLQ49MI3 558 aaPredicted RBP12.05□□□□□ -0.48
PPARGC1A-216ENST00000612355 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
PPARGC1A-216ENST00000612355 RNF180Q86T96 592 aa12.05□□□□□ -0.48
PPARGC1A-216ENST00000612355 ZNF512BQ96KM6 892 aaPredicted RBP12.05□□□□□ -0.48
PPARGC1A-216ENST00000612355 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■■□□□ 12.8
PPARGC1A-216ENST00000612355 API5Q9BZZ5 524 aaKnown RBP12.05□□□□□ -0.48
PPARGC1A-216ENST00000612355 TMEM39AQ9NV64 488 aa12.05□□□□□ -0.48
PPARGC1A-216ENST00000612355 ADAMTS4O75173 837 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 TIMP1P01033 207 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 GNAI3P08754 354 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 DYNLL1P63167 89 aaKnown RBP12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 SLFN5Q08AF3 891 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 ADGRE1Q14246 886 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 SLC44A5Q8NCS7 719 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 TSEN34Q9BSV6 310 aaKnown RBP12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 C1QTNF1Q9BXJ1 281 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 PRDM12Q9H4Q4 367 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 CABP5Q9NP86 173 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 GPR108Q9NPR9 543 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 SNRKQ9NRH2 765 aa12.04□□□□□ -0.48
PPARGC1A-216ENST00000612355 MCM3APO60318 1980 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 A0A1W2PRG0 241 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 DCDC2CA8MYV0 355 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 PGK1P00558 417 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 CT47B1P0C2W7 299 aaPredicted RBP12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 DSG3P32926 999 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 PBX2P40425 430 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 GABPAQ06546 454 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 PPIGQ13427 754 aaKnown RBP eCLIP12.03□□□□□ -0.481e-6■■□□□ 14.5
PPARGC1A-216ENST00000612355 TMEM240Q5SV17 173 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 MFSD5Q6N075 450 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 TMED8Q6PL24 325 aaPredicted RBP12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 C16orf59Q7L2K0 433 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 TTC6Q86TZ1 520 aa12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 PIH1D3Q9NQM4 214 aaKnown RBP12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 CXXC1Q9P0U4 656 aaPredicted RBP12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 NOB1Q9ULX3 412 aaKnown RBP12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 DIS3Q9Y2L1 958 aaKnown RBP12.03□□□□□ -0.48
PPARGC1A-216ENST00000612355 MOXD2PA6NHM9 499 aa12.02□□□□□ -0.49
PPARGC1A-216ENST00000612355 ZNF865P0CJ78 1059 aaPredicted RBP12.02□□□□□ -0.49
PPARGC1A-216ENST00000612355 FCER1AP12319 257 aa12.02□□□□□ -0.49
PPARGC1A-216ENST00000612355 AKR1A1P14550 325 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms