RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PPIGQ13427 754 aaKnown RBP eCLIP9□□□□□ -0.97
PTCHD3P1-201ENST00000612350 FAM47AQ5JRC9 791 aa9□□□□□ -0.97
PTCHD3P1-201ENST00000612350 METTL24Q5JXM2 366 aa9□□□□□ -0.97
PTCHD3P1-201ENST00000612350 PRAMEF19Q5SWL8 479 aa9□□□□□ -0.97
PTCHD3P1-201ENST00000612350 OLFML2BQ68BL8 750 aa9□□□□□ -0.97
PTCHD3P1-201ENST00000612350 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
PTCHD3P1-201ENST00000612350 RABGAP1Q9Y3P9 1069 aa9□□□□□ -0.97
PTCHD3P1-201ENST00000612350 ZDBF2Q9HCK1 2354 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 CCER2I3L3R5 266 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 GRM8O00222 908 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 RFXAPO00287 272 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 SLC5A1P13866 664 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 CSF2RAP15509 400 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 CCNA1P78396 465 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 FKBP5Q13451 457 aaPredicted RBP8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 PICALMQ13492 652 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 UIMC1Q96RL1 719 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 EMILIN3Q9NT22 766 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 BRWD1Q9NSI6 2320 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 ZNF521Q96K83 1311 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 SALL1Q9NSC2 1324 aa8.99□□□□□ -0.97
PTCHD3P1-201ENST00000612350 CHD9Q3L8U1 2897 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 A0A1W2PQ45 241 aaPredicted RBP8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 A0A1W2PQY0 241 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 DCDC2CA8MYV0 355 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 IFIT1P09914 478 aaKnown RBP8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 HOXB3P14651 431 aaPredicted RBP8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 MYOGP15173 224 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 RHBDL3P58872 404 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 WDR78Q5VTH9 848 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 KRT40Q6A162 431 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 PSRC1Q6PGN9 363 aaPredicted RBP8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 CCDC174Q6PII3 467 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 ANKS1AQ92625 1134 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 HLA-CQ95604 372 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 CWC22Q9HCG8 908 aaKnown RBP8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 MRS2Q9HD23 443 aa8.98□□□□□ -0.97
PTCHD3P1-201ENST00000612350 CACNA1FO60840 1977 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 USP17L10C9JJH3 530 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 F6X3S4 739 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 COBLO75128 1261 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 PGK1P00558 417 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 ALADP13716 330 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 RABGGTBP53611 331 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 CALD1Q05682 793 aaKnown RBP8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 PUM3Q15397 648 aaKnown RBP8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 FAM178BQ8IXR5 827 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 GJD3Q8N144 294 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 SUCLG2Q96I99 432 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 BTBD7Q9P203 1132 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 ADAMTS8Q9UP79 889 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 IVNS1ABPQ9Y6Y0 642 aa8.97□□□□□ -0.97
PTCHD3P1-201ENST00000612350 GPR75-ASB3A0A0A6YYF3 556 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 POTEB3A0JP26 581 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 EPOPA6NHQ4 379 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 GTPBP6O43824 516 aaPredicted RBP8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 ASNSP08243 561 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 BTDP43251 543 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 CDK7P50613 346 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 SHROOM1Q2M3G4 852 aaPredicted RBP8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 TWISTNBQ3B726 338 aaPredicted RBP8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 RABL6Q3YEC7 729 aaPredicted RBP8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 PPP2R2DQ66LE6 453 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 POTEBQ6S5H4 581 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 LBX2Q6XYB7 198 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 DPP9Q86TI2 863 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 ZNF710Q8N1W2 664 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 TMEM199Q8N511 208 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 IL23AQ9NPF7 189 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 XPNPEP3Q9NQH7 507 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 PCDHA11Q9Y5I1 949 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 REV3LO60673 3130 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 A0A0G2JMZ2 1700 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 ZNF236Q9UL36 1845 aa8.96□□□□□ -0.98
PTCHD3P1-201ENST00000612350 FAM205CA6NFA0 338 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 STRNO43815 780 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 ADAMTS4O75173 837 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 FGBP02675 491 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 ADORA2AP29274 412 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 USP17L2Q6R6M4 530 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 CATSPERGQ6ZRH7 1159 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 RNF180Q86T96 592 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 KLHDC4Q8TBB5 520 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 LPIN2Q92539 896 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 TSR2Q969E8 191 aaKnown RBP8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 HS3ST6Q96QI5 342 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 TSEN34Q9BSV6 310 aaKnown RBP8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 STARD7Q9NQZ5 370 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 HERC5Q9UII4 1024 aaKnown RBP8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 XIRP2A4UGR9 3374 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 SIPA1L1O43166 1804 aa8.95□□□□□ -0.98
PTCHD3P1-201ENST00000612350 CHD7Q9P2D1 2997 aa8.94□□□□□ -0.98
PTCHD3P1-201ENST00000612350 USP17L15C9J2P7 530 aa8.94□□□□□ -0.98
PTCHD3P1-201ENST00000612350 USP17L13C9JLJ4 530 aa8.94□□□□□ -0.98
PTCHD3P1-201ENST00000612350 USP17L11C9JVI0 530 aa8.94□□□□□ -0.98
PTCHD3P1-201ENST00000612350 USP17L18D6R9N7 530 aa8.94□□□□□ -0.98
PTCHD3P1-201ENST00000612350 USP17L22D6RA61 530 aa8.94□□□□□ -0.98
PTCHD3P1-201ENST00000612350 USP17L17D6RBQ6 530 aa8.94□□□□□ -0.98
PTCHD3P1-201ENST00000612350 USP17L19D6RCP7 530 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms