RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 GGA3Q9NZ52 723 aa15.48■□□□□ 0.07
NEAT1-204ENST00000612303 VPS37CA5D8V6 355 aaPredicted RBP15.47■□□□□ 0.07
NEAT1-204ENST00000612303 PHF20L1A8MW92 1017 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 F13A1P00488 732 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 GH2P01242 217 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 PARP1P09874 1014 aaKnown RBP15.47■□□□□ 0.07
NEAT1-204ENST00000612303 EEF2P13639 858 aaKnown RBP15.47■□□□□ 0.07
NEAT1-204ENST00000612303 SUPT20HL1Q3ZLR7 823 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 MIGA2Q7L4E1 593 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 SIAH1Q8IUQ4 282 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 CDAN1Q8IWY9 1227 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 FBXO18Q8NFZ0 1043 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 PHKBQ93100 1093 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 DCPSQ96C86 337 aaKnown RBP15.47■□□□□ 0.07
NEAT1-204ENST00000612303 C8orf76Q96K31 380 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 MAD2L2Q9UI95 211 aa15.47■□□□□ 0.07
NEAT1-204ENST00000612303 DTNBO60941 627 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 GDF11O95390 407 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 PLEKHA8P1O95397 391 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 ASNSP08243 561 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 PDHBP11177 359 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 EPHX2P34913 555 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 ICA1Q05084 483 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 ASPRV1Q53RT3 343 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 NBPF12Q5TAG4 269 aaPredicted RBP15.46■□□□□ 0.07
NEAT1-204ENST00000612303 SRBD1Q8N5C6 995 aaKnown RBP15.46■□□□□ 0.07
NEAT1-204ENST00000612303 ALG1Q9BT22 464 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 ZNF341Q9BYN7 854 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 ZSCAN16Q9H4T2 348 aaPredicted RBP15.46■□□□□ 0.07
NEAT1-204ENST00000612303 ZNF112Q9UJU3 913 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 ZBTB21Q9ULJ3 1066 aa15.46■□□□□ 0.07
NEAT1-204ENST00000612303 WDR90Q96KV7 1748 aa15.46■□□□□ 0.06
NEAT1-204ENST00000612303 CTNND1O60716 968 aaKnown RBP15.45■□□□□ 0.06
NEAT1-204ENST00000612303 BAG4O95429 457 aaKnown RBP15.45■□□□□ 0.06
NEAT1-204ENST00000612303 JAG1P78504 1218 aa15.45■□□□□ 0.06
NEAT1-204ENST00000612303 NFKBIBQ15653 356 aa15.45■□□□□ 0.06
NEAT1-204ENST00000612303 GPATCH4Q5T3I0 446 aaKnown RBP15.45■□□□□ 0.06
NEAT1-204ENST00000612303 FAM177A1Q8N128 213 aaPredicted RBP15.45■□□□□ 0.06
NEAT1-204ENST00000612303 GMCL1P1Q8NEA9 526 aa15.45■□□□□ 0.06
NEAT1-204ENST00000612303 DCAF4Q8WV16 495 aa15.45■□□□□ 0.06
NEAT1-204ENST00000612303 SPZ1Q9BXG8 430 aa15.45■□□□□ 0.06
NEAT1-204ENST00000612303 ARHGEF10LQ9HCE6 1279 aa15.45■□□□□ 0.06
NEAT1-204ENST00000612303 V9GY48 417 aaPredicted RBP15.45■□□□□ 0.06
NEAT1-204ENST00000612303 CNTNAP5Q8WYK1 1306 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 DCAF8L1A6NGE4 600 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 KLRF2D3W0D1 207 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 MCM4P33991 863 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 ATP2B2Q01814 1243 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 ZNF543Q08ER8 600 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 TRIM29Q14134 588 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 CDC37L1Q7L3B6 337 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 PNMA8AQ86V59 439 aaPredicted RBP15.44■□□□□ 0.06
NEAT1-204ENST00000612303 SULF1Q8IWU6 871 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 LRRC47Q8N1G4 583 aaKnown RBP15.44■□□□□ 0.06
NEAT1-204ENST00000612303 STAG2Q8N3U4 1231 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 CCDC82Q8N4S0 544 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 TAF1DQ9H5J8 278 aaPredicted RBP15.44■□□□□ 0.06
NEAT1-204ENST00000612303 SH2D4AQ9H788 454 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 SCAF8Q9UPN6 1271 aaKnown RBP15.44■□□□□ 0.06
NEAT1-204ENST00000612303 ATAD5Q96QE3 1844 aa15.44■□□□□ 0.06
NEAT1-204ENST00000612303 BAZ2BQ9UIF8 2168 aaKnown RBP15.43■□□□□ 0.06
NEAT1-204ENST00000612303 USP17L5A8MUK1 530 aa15.43■□□□□ 0.06
NEAT1-204ENST00000612303 PPFIA3O75145 1194 aa15.43■□□□□ 0.06
NEAT1-204ENST00000612303 XBP1P17861 261 aa15.43■□□□□ 0.06
NEAT1-204ENST00000612303 PTMSP20962 102 aa15.43■□□□□ 0.06
NEAT1-204ENST00000612303 PKN1Q16512 942 aa15.43■□□□□ 0.06
NEAT1-204ENST00000612303 SHROOM1Q2M3G4 852 aaPredicted RBP15.43■□□□□ 0.06
NEAT1-204ENST00000612303 FOXD4L5Q5VV16 416 aaPredicted RBP15.43■□□□□ 0.06
NEAT1-204ENST00000612303 USP17L2Q6R6M4 530 aa15.43■□□□□ 0.06
NEAT1-204ENST00000612303 CLEC10AQ8IUN9 316 aa15.43■□□□□ 0.06
NEAT1-204ENST00000612303 CMTR1Q8N1G2 835 aaKnown RBP15.43■□□□□ 0.06
NEAT1-204ENST00000612303 FOXD4L4Q8WXT5 416 aaPredicted RBP15.43■□□□□ 0.06
NEAT1-204ENST00000612303 TMX2Q9Y320 296 aa15.43■□□□□ 0.06
NEAT1-204ENST00000612303 TCHHQ07283 1943 aa15.43■□□□□ 0.06
NEAT1-204ENST00000612303 POTECB2RU33 542 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 F5H6K3 240 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 GOLGA6L22H0YM25 854 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 KLRC3Q07444 240 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 RESTQ13127 1097 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 PFKFB3Q16875 520 aaPredicted RBP15.42■□□□□ 0.06
NEAT1-204ENST00000612303 SLFN13Q68D06 897 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 KRT40Q6A162 431 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 USP48Q86UV5 1035 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 GMCL1Q96IK5 515 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 RIOX1Q9H6W3 641 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 SH3GLB2Q9NR46 395 aa15.42■□□□□ 0.06
NEAT1-204ENST00000612303 DDX11L8A8MPP1 907 aa15.41■□□□□ 0.06
NEAT1-204ENST00000612303 SCG2P13521 617 aa15.41■□□□□ 0.06
NEAT1-204ENST00000612303 ATL3Q6DD88 541 aa15.41■□□□□ 0.06
NEAT1-204ENST00000612303 AIFM3Q96NN9 605 aa15.41■□□□□ 0.06
NEAT1-204ENST00000612303 GOPCQ9HD26 462 aa15.41■□□□□ 0.06
NEAT1-204ENST00000612303 MTMR7Q9Y216 660 aa15.41■□□□□ 0.06
NEAT1-204ENST00000612303 DOCK1Q14185 1865 aa15.4■□□□□ 0.06
NEAT1-204ENST00000612303 A0A1W2PRG0 241 aa15.4■□□□□ 0.06
NEAT1-204ENST00000612303 CYTH3O43739 400 aa15.4■□□□□ 0.06
NEAT1-204ENST00000612303 GOLGA8HP0CJ92 632 aa15.4■□□□□ 0.06
NEAT1-204ENST00000612303 SLC1A4P43007 532 aa15.4■□□□□ 0.06
NEAT1-204ENST00000612303 SAFBQ15424 915 aaKnown RBP eCLIP15.4■□□□□ 0.06
NEAT1-204ENST00000612303 SLC35G1Q2M3R5 365 aa15.4■□□□□ 0.06
NEAT1-204ENST00000612303 NOL9Q5SY16 702 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms