RNA–Protein interactions for RNA: ENST00000612093.1

CSPG4P10-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

TSL 2 BASIC

Gene CSPG4P10, Length 3,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-202ENST00000612093 FOXN1O15353 648 aa12.81□□□□□ -0.36
CSPG4P10-202ENST00000612093 SLC3A2P08195 630 aaKnown RBP12.81□□□□□ -0.36
CSPG4P10-202ENST00000612093 CASP1P29466 404 aa12.81□□□□□ -0.36
CSPG4P10-202ENST00000612093 SEC23AQ15436 765 aa12.81□□□□□ -0.36
CSPG4P10-202ENST00000612093 SLF2Q8IX21 1173 aa12.81□□□□□ -0.36
CSPG4P10-202ENST00000612093 ZNF654Q8IZM8 581 aa12.81□□□□□ -0.36
CSPG4P10-202ENST00000612093 KIF18AQ8NI77 898 aa12.81□□□□□ -0.36
CSPG4P10-202ENST00000612093 LAMB1P07942 1786 aa12.81□□□□□ -0.36
CSPG4P10-202ENST00000612093 ADAMTSL1Q8N6G6 1762 aa12.81□□□□□ -0.36
CSPG4P10-202ENST00000612093 TSPY2A6NKD2 308 aa12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 PPIP5K2O43314 1243 aa12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 TFRCP02786 760 aaKnown RBP12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 PDE4BQ07343 736 aa12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 R3HDM1Q15032 1099 aaKnown RBP12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 PODNQ7Z5L7 613 aa12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 IQCA1Q86XH1 822 aa12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 TMEM232C9JQI7 657 aa12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 FGRP09769 529 aa12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 KCNA3P22001 575 aa12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 IFIT1BQ5T764 474 aaKnown RBP12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 SLC16A10Q8TF71 515 aa12.8□□□□□ -0.36
CSPG4P10-202ENST00000612093 ORC4O43929 436 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 ADKP55263 362 aaKnown RBP12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 RTN1Q16799 776 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 AMOTL1Q8IY63 956 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 DPF2Q92785 391 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 MKNK2Q9HBH9 465 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 NAV1Q8NEY1 1877 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 CDK5RAP2Q96SN8 1893 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 NTRK3Q16288 839 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 PLA2G4DQ86XP0 818 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 MRPS27Q92552 414 aaKnown RBP12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 FAM163AQ96GL9 167 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 SLC26A6Q9BXS9 759 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 IRX2Q9BZI1 471 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 PLCG2P16885 1265 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 TFAP4Q01664 338 aa12.79□□□□□ -0.36
CSPG4P10-202ENST00000612093 PHACTR2O75167 634 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 IARSP41252 1262 aaKnown RBP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 FKBP15Q5T1M5 1219 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 CPLX2Q6PUV4 134 aaKnown RBP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 NEK11Q8NG66 645 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 ALG1Q9BT22 464 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 DDX4Q9NQI0 724 aaKnown RBP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 ZNF277Q9NRM2 450 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 FAM170AA1A519 330 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 CACNB3P54284 484 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 IQCB1Q15051 598 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 DHX40Q8IX18 779 aaKnown RBP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 CARD6Q9BX69 1037 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 LZTFL1Q9NQ48 299 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 BAZ2BQ9UIF8 2168 aaKnown RBP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 SNED1Q8TER0 1413 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 PSDA5PKW4 1024 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 USP17L3A6NCW0 530 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 USP17L4A6NCW7 530 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 KIF28PB7ZC32 967 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 PCP11498 1178 aaKnown RBP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 PDIA4P13667 645 aaKnown RBP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 DACT2Q5SW24 774 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 USP17L1Q7RTZ2 530 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 TMTC2Q8N394 836 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 FANCBQ8NB91 859 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 TEKT1Q969V4 418 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 ZNF396Q96N95 335 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 KCNJ14Q9UNX9 436 aa12.78□□□□□ -0.36
CSPG4P10-202ENST00000612093 YDJCA8MPS7 323 aa12.77□□□□□ -0.36
CSPG4P10-202ENST00000612093 CDKL5O76039 1030 aa12.77□□□□□ -0.36
CSPG4P10-202ENST00000612093 TPM3P06753 285 aa12.77□□□□□ -0.36
CSPG4P10-202ENST00000612093 GUCY1A2P33402 732 aa12.77□□□□□ -0.36
CSPG4P10-202ENST00000612093 FAM160A1Q05DH4 1040 aa12.77□□□□□ -0.36
CSPG4P10-202ENST00000612093 BBXQ8WY36 941 aaPredicted RBP12.77□□□□□ -0.36
CSPG4P10-202ENST00000612093 SUGT1Q9Y2Z0 365 aa12.77□□□□□ -0.36
CSPG4P10-202ENST00000612093 ANKRD65E5RJM6 399 aa12.77□□□□□ -0.37
CSPG4P10-202ENST00000612093 SPTLC2O15270 562 aa12.77□□□□□ -0.37
CSPG4P10-202ENST00000612093 ZNF202O95125 648 aa12.77□□□□□ -0.37
CSPG4P10-202ENST00000612093 CRKP46108 304 aa12.77□□□□□ -0.37
CSPG4P10-202ENST00000612093 CCDC93Q567U6 631 aa12.77□□□□□ -0.37
CSPG4P10-202ENST00000612093 STRIP1Q5VSL9 837 aa12.77□□□□□ -0.37
CSPG4P10-202ENST00000612093 GDAP1L1Q96MZ0 367 aa12.77□□□□□ -0.37
CSPG4P10-202ENST00000612093 WDHD1O75717 1129 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 SLURP2P0DP57 97 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 ERCC3P19447 782 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 AFMP43652 599 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 UBASH3AP57075 661 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 APOBEC3HQ6NTF7 200 aaKnown RBP12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 CDC42EP5Q6NZY7 148 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 CATIPQ7Z7H3 387 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 CCDC125Q86Z20 511 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 FBXO18Q8NFZ0 1043 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 PUF60Q9UHX1 559 aaKnown RBP12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 TSPY3P0CV98 308 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 TSPY8P0CW00 308 aa12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 SSRP1Q08945 709 aaKnown RBP12.76□□□□□ -0.37
CSPG4P10-202ENST00000612093 NFIAQ12857 509 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms