RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 VCPKMTQ9H867 229 aa30.9■■■□□ 2.54
VEGFA-226ENST00000611736 TACC3Q9Y6A5 838 aa30.9■■■□□ 2.54
VEGFA-226ENST00000611736 CHMLP26374 656 aa30.89■■■□□ 2.54
VEGFA-226ENST00000611736 FCGRTP55899 365 aa30.89■■■□□ 2.54
VEGFA-226ENST00000611736 TFAP4Q01664 338 aa30.89■■■□□ 2.54
VEGFA-226ENST00000611736 IGKV6D-41A0A0C4DH26 115 aa30.88■■■□□ 2.53
VEGFA-226ENST00000611736 RAD21O60216 631 aa30.88■■■□□ 2.53
VEGFA-226ENST00000611736 PEX10O60683 326 aa30.88■■■□□ 2.53
VEGFA-226ENST00000611736 TANGO6Q9C0B7 1094 aa30.88■■■□□ 2.53
VEGFA-226ENST00000611736 MYH4Q9Y623 1939 aa30.87■■■□□ 2.53
VEGFA-226ENST00000611736 NEDD1Q8NHV4 660 aa30.87■■■□□ 2.53
VEGFA-226ENST00000611736 LPAR1Q92633 364 aa30.87■■■□□ 2.53
VEGFA-226ENST00000611736 CEP95Q96GE4 821 aa30.87■■■□□ 2.53
VEGFA-226ENST00000611736 GOPCQ9HD26 462 aa30.87■■■□□ 2.53
VEGFA-226ENST00000611736 TOMM22Q9NS69 142 aa30.87■■■□□ 2.53
VEGFA-226ENST00000611736 NYAP2Q9P242 653 aa30.87■■■□□ 2.53
VEGFA-226ENST00000611736 GNRH1P01148 92 aa30.86■■■□□ 2.53
VEGFA-226ENST00000611736 RUFY2Q8WXA3 655 aa30.86■■■□□ 2.53
VEGFA-226ENST00000611736 PAGR1Q9BTK6 254 aa30.86■■■□□ 2.53
VEGFA-226ENST00000611736 TXNRD2Q9NNW7 524 aa30.86■■■□□ 2.53
VEGFA-226ENST00000611736 CLIP2Q9UDT6 1046 aa30.86■■■□□ 2.53
VEGFA-226ENST00000611736 PTCH2Q9Y6C5 1203 aa30.86■■■□□ 2.53
VEGFA-226ENST00000611736 PLIN4Q96Q06 1357 aa30.86■■■□□ 2.53
VEGFA-226ENST00000611736 DOCK3Q8IZD9 2030 aa30.85■■■□□ 2.53
VEGFA-226ENST00000611736 RAD50Q92878 1312 aa30.85■■■□□ 2.53
VEGFA-226ENST00000611736 TSPY2A6NKD2 308 aa30.85■■■□□ 2.53
VEGFA-226ENST00000611736 RANBP6O60518 1105 aaKnown RBP30.85■■■□□ 2.53
VEGFA-226ENST00000611736 RRP12Q5JTH9 1297 aaKnown RBP30.85■■■□□ 2.53
VEGFA-226ENST00000611736 GTF3C2Q8WUA4 911 aaPredicted RBP30.85■■■□□ 2.53
VEGFA-226ENST00000611736 DSCC1Q9BVC3 393 aa30.85■■■□□ 2.53
VEGFA-226ENST00000611736 MTMR4Q9NYA4 1195 aa30.85■■■□□ 2.53
VEGFA-226ENST00000611736 MORF4L1Q9UBU8 362 aa30.85■■■□□ 2.53
VEGFA-226ENST00000611736 ORC4O43929 436 aa30.84■■■□□ 2.53
VEGFA-226ENST00000611736 HOXD10P28358 340 aa30.84■■■□□ 2.53
VEGFA-226ENST00000611736 POTEEQ6S8J3 1075 aa30.84■■■□□ 2.53
VEGFA-226ENST00000611736 NBPF3Q9H094 633 aa30.84■■■□□ 2.53
VEGFA-226ENST00000611736 RBPJLQ9UBG7 517 aa30.84■■■□□ 2.53
VEGFA-226ENST00000611736 SRRDQ9UH36 339 aa30.84■■■□□ 2.53
VEGFA-226ENST00000611736 LAMA4Q16363 1823 aa30.83■■■□□ 2.53
VEGFA-226ENST00000611736 TNPO2O14787 897 aaKnown RBP30.83■■■□□ 2.53
VEGFA-226ENST00000611736 WDR46O15213 610 aaKnown RBP30.83■■■□□ 2.53
VEGFA-226ENST00000611736 TTLL1O95922 423 aa30.83■■■□□ 2.53
VEGFA-226ENST00000611736 TBC1D10CQ8IV04 446 aa30.83■■■□□ 2.53
VEGFA-226ENST00000611736 GPRC5AQ8NFJ5 357 aa30.83■■■□□ 2.53
VEGFA-226ENST00000611736 MYPNQ86TC9 1320 aa30.82■■■□□ 2.52
VEGFA-226ENST00000611736 SPDYE16A6NNV3 312 aaPredicted RBP30.82■■■□□ 2.52
VEGFA-226ENST00000611736 ZNF213O14771 459 aa30.82■■■□□ 2.52
VEGFA-226ENST00000611736 FGRP09769 529 aa30.82■■■□□ 2.52
VEGFA-226ENST00000611736 PRMT2P55345 433 aa30.81■■■□□ 2.52
VEGFA-226ENST00000611736 ERVK-9P63128 1117 aa30.81■■■□□ 2.52
VEGFA-226ENST00000611736 ERVK-24P63145 666 aa30.81■■■□□ 2.52
VEGFA-226ENST00000611736 AKNAD1Q5T1N1 836 aa30.81■■■□□ 2.52
VEGFA-226ENST00000611736 SAMD1Q6SPF0 538 aaPredicted RBP30.81■■■□□ 2.52
VEGFA-226ENST00000611736 MFSD6Q6ZSS7 791 aa30.81■■■□□ 2.52
VEGFA-226ENST00000611736 LRRC47Q8N1G4 583 aaKnown RBP30.81■■■□□ 2.52
VEGFA-226ENST00000611736 NMT2O60551 498 aa30.8■■■□□ 2.52
VEGFA-226ENST00000611736 FLOT1O75955 427 aa30.8■■■□□ 2.52
VEGFA-226ENST00000611736 PRKCZQ05513 592 aa30.8■■■□□ 2.52
VEGFA-226ENST00000611736 COG2Q14746 738 aa30.8■■■□□ 2.52
VEGFA-226ENST00000611736 STAG1Q8WVM7 1258 aa30.8■■■□□ 2.52
VEGFA-226ENST00000611736 CTNNA3Q9UI47 895 aa30.8■■■□□ 2.52
VEGFA-226ENST00000611736 GABRQQ9UN88 632 aa30.8■■■□□ 2.52
VEGFA-226ENST00000611736 RABGAP1Q9Y3P9 1069 aa30.8■■■□□ 2.52
VEGFA-226ENST00000611736 RLFQ13129 1914 aa30.8■■■□□ 2.52
VEGFA-226ENST00000611736 F5H6K3 240 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 CNMDO75829 334 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 NDUFB10O96000 172 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 KLRC3Q07444 240 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 Q3C1V9 767 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 BMP2KLQ5H9B9 411 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 FAM83BQ5T0W9 1011 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 RAET1EQ8TD07 263 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 MKL1Q969V6 931 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 COA7Q96BR5 231 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 NUP88Q99567 741 aaPredicted RBP30.79■■■□□ 2.52
VEGFA-226ENST00000611736 HOXC10Q9NYD6 342 aa30.79■■■□□ 2.52
VEGFA-226ENST00000611736 SGSM2O43147 1006 aa30.78■■■□□ 2.52
VEGFA-226ENST00000611736 IMMTQ16891 758 aaKnown RBP30.78■■■□□ 2.52
VEGFA-226ENST00000611736 SLC9C1Q4G0N8 1177 aa30.78■■■□□ 2.52
VEGFA-226ENST00000611736 LBX2Q6XYB7 198 aa30.78■■■□□ 2.52
VEGFA-226ENST00000611736 RNF41Q9H4P4 317 aaPredicted RBP30.78■■■□□ 2.52
VEGFA-226ENST00000611736 IL17RBQ9NRM6 502 aa30.78■■■□□ 2.52
VEGFA-226ENST00000611736 STX8Q9UNK0 236 aa30.78■■■□□ 2.52
VEGFA-226ENST00000611736 PCP11498 1178 aaKnown RBP30.77■■■□□ 2.52
VEGFA-226ENST00000611736 RGS19P49795 217 aa30.77■■■□□ 2.52
VEGFA-226ENST00000611736 PTH1RQ03431 593 aa30.77■■■□□ 2.52
VEGFA-226ENST00000611736 BTBD7Q9P203 1132 aa30.77■■■□□ 2.52
VEGFA-226ENST00000611736 NEDD4P46934 1319 aa30.76■■■□□ 2.52
VEGFA-226ENST00000611736 PARP14Q460N5 1801 aa30.76■■■□□ 2.51
VEGFA-226ENST00000611736 DSG3P32926 999 aa30.76■■■□□ 2.51
VEGFA-226ENST00000611736 PPP4R3BQ5MIZ7 849 aa30.76■■■□□ 2.51
VEGFA-226ENST00000611736 CCAR1Q8IX12 1150 aaKnown RBP30.76■■■□□ 2.51
VEGFA-226ENST00000611736 ATG4CQ96DT6 458 aa30.76■■■□□ 2.51
VEGFA-226ENST00000611736 PORCNQ9H237 461 aa30.76■■■□□ 2.51
VEGFA-226ENST00000611736 FBXO28Q9NVF7 368 aa30.76■■■□□ 2.51
VEGFA-226ENST00000611736 PPP4R2Q9NY27 417 aa30.76■■■□□ 2.51
VEGFA-226ENST00000611736 FLT3LGP49771 235 aa30.75■■■□□ 2.51
VEGFA-226ENST00000611736 SH3TC2Q8TF17 1288 aa30.75■■■□□ 2.51
VEGFA-226ENST00000611736 SYNPO2Q9UMS6 1093 aa30.75■■■□□ 2.51
VEGFA-226ENST00000611736 ERICH6BQ5W0A0 696 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms