RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 OVOS2A0A0J9YW53 1432 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 GOLGA6BA6NDN3 693 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 CETN3O15182 167 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 DDAH1O94760 285 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 UFL1O94874 794 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 ERCC3P19447 782 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 DNM2P50570 870 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 EIF6P56537 245 aaKnown RBP13.87□□□□□ -0.19
CDH1-212ENST00000611625 CHRNDQ07001 517 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 TTC31Q49AM3 519 aaPredicted RBP13.87□□□□□ -0.19
CDH1-212ENST00000611625 OVOS2Q6IE36 1432 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 GRAMD1CQ8IYS0 662 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 REXO1Q8N1G1 1221 aaKnown RBP13.87□□□□□ -0.19
CDH1-212ENST00000611625 HAUS4Q9H6D7 363 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 FAM207AQ9NSI2 230 aaPredicted RBP13.87□□□□□ -0.19
CDH1-212ENST00000611625 ZBTB1Q9Y2K1 713 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 RPS8P62241 208 aaKnown RBP13.87□□□□□ -0.19
CDH1-212ENST00000611625 NCBP1Q09161 790 aaKnown RBP13.87□□□□□ -0.19
CDH1-212ENST00000611625 MAPKAPK5Q8IW41 473 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 IFIH1Q9BYX4 1025 aaKnown RBP13.87□□□□□ -0.19
CDH1-212ENST00000611625 CASP14P31944 242 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 LIFRP42702 1097 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 ADCY7P51828 1080 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 CCDC144BQ3MJ40 725 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 UTP14CQ5TAP6 766 aaKnown RBP13.87□□□□□ -0.19
CDH1-212ENST00000611625 PPP4R3AQ6IN85 833 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 CNBD1Q8NA66 436 aa13.87□□□□□ -0.19
CDH1-212ENST00000611625 ENOX1Q8TC92 643 aaKnown RBP13.87□□□□□ -0.19
CDH1-212ENST00000611625 PPP1R1BQ9UD71 204 aaPredicted RBP13.87□□□□□ -0.19
CDH1-212ENST00000611625 CYP27B1O15528 508 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 DESP17661 470 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 CALCRLQ16602 461 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 PNMA1Q8ND90 353 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 ZSWIM5Q9P217 1185 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 CDC23Q9UJX2 597 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 TMEM94Q12767 1356 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 SETD1BQ9UPS6 1966 aaKnown RBP13.86□□□□□ -0.19
CDH1-212ENST00000611625 RPN1P04843 607 aaKnown RBP13.86□□□□□ -0.19
CDH1-212ENST00000611625 COPB1P53618 953 aaKnown RBP13.86□□□□□ -0.19
CDH1-212ENST00000611625 INF2Q27J81 1249 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 SND1Q7KZF4 910 aaKnown RBP eCLIP13.86□□□□□ -0.198e-7■■■■□ 21
CDH1-212ENST00000611625 CERS3Q8IU89 383 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 FMR1NBQ8N0W7 255 aaPredicted RBP13.86□□□□□ -0.19
CDH1-212ENST00000611625 CARD10Q9BWT7 1032 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 TYW1BQ6NUM6 668 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 CCDC24Q8N4L8 307 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDH1-212ENST00000611625 RIMBP2O15034 1052 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 RNASE9P60153 205 aaKnown RBP13.86□□□□□ -0.19
CDH1-212ENST00000611625 ZSCAN26Q16670 478 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 HERC4Q5GLZ8 1057 aaPredicted RBP13.86□□□□□ -0.19
CDH1-212ENST00000611625 NLRP10Q86W26 655 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 C2CD5Q86YS7 1000 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 TGFBRAP1Q8WUH2 860 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 IQCDQ96DY2 449 aa13.86□□□□□ -0.19
CDH1-212ENST00000611625 EPN1Q9Y6I3 576 aaPredicted RBP13.86□□□□□ -0.19
CDH1-212ENST00000611625 WDR17Q8IZU2 1322 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 PRKAB2O43741 272 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 SLFN14P0C7P3 912 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 PCP11498 1178 aaKnown RBP13.85□□□□□ -0.19
CDH1-212ENST00000611625 SRGAP1Q7Z6B7 1085 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 HOOK3Q86VS8 718 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 GDAP1L1Q96MZ0 367 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 AXIN2Q9Y2T1 843 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 CTNNA2P26232 953 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 ASIC2Q16515 512 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 HAUS3Q68CZ6 603 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 RRAGAQ7L523 313 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 IFT20Q8IY31 132 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 PIH1D3Q9NQM4 214 aaKnown RBP13.85□□□□□ -0.19
CDH1-212ENST00000611625 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
CDH1-212ENST00000611625 SMCO2A6NFE2 343 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 EPB41P11171 864 aaKnown RBP13.85□□□□□ -0.19
CDH1-212ENST00000611625 CALRP27797 417 aaKnown RBP13.85□□□□□ -0.19
CDH1-212ENST00000611625 CCDC121Q6ZUS5 278 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 USP37Q86T82 979 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 GPKOWQ92917 476 aaPredicted RBP eCLIP13.85□□□□□ -0.19
CDH1-212ENST00000611625 PXDNLA1KZ92 1463 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 LONP1P36776 959 aaKnown RBP13.85□□□□□ -0.19
CDH1-212ENST00000611625 FBXO38Q6PIJ6 1188 aa13.85□□□□□ -0.19
CDH1-212ENST00000611625 SMYD4Q8IYR2 804 aaPredicted RBP13.85□□□□□ -0.19
CDH1-212ENST00000611625 SAMSN1Q9NSI8 373 aaKnown RBP13.85□□□□□ -0.19
CDH1-212ENST00000611625 NDUFAB1O14561 156 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 SLC35F6Q8N357 371 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 LCORLQ8N3X6 602 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 NSRP1Q9H0G5 558 aaKnown RBP13.84□□□□□ -0.19
CDH1-212ENST00000611625 TLDC2A0PJX2 215 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 TMEM110-MUSTN1A8MSY1 372 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 SEC31AO94979 1220 aaKnown RBP13.84□□□□□ -0.19
CDH1-212ENST00000611625 GTF2A1P52655 376 aaPredicted RBP13.84□□□□□ -0.19
CDH1-212ENST00000611625 CCDC91Q7Z6B0 441 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 DIP2CQ9Y2E4 1556 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 PIK3C2BO00750 1634 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 KIDINS220Q9ULH0 1771 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 ATP8B1O43520 1251 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 IL6STP40189 918 aaPredicted RBP13.84□□□□□ -0.19
CDH1-212ENST00000611625 MCAMP43121 646 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 TRAPPC10P48553 1259 aa13.84□□□□□ -0.19
CDH1-212ENST00000611625 TRIM58Q8NG06 486 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms