RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CORO7P57737 925 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 LEKR1Q6ZMV7 388 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 FAM43BQ6ZT52 329 aaPredicted RBP18.19■□□□□ 0.5
RTN1-209ENST00000611068 SLC44A5Q8NCS7 719 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 SMARCC2Q8TAQ2 1214 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 MTMR7Q9Y216 660 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 SLC12A7Q9Y666 1083 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 PDCP20941 246 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 ZNF165P49910 485 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 CC2D1AQ6P1N0 951 aaPredicted RBP18.19■□□□□ 0.5
RTN1-209ENST00000611068 UBAC1Q9BSL1 405 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 FTOQ9C0B1 505 aaKnown RBP eCLIP18.19■□□□□ 0.5
RTN1-209ENST00000611068 CNNM2Q9H8M5 875 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 PCDHAC2Q9Y5I4 1007 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 COL11A2P13942 1736 aaPredicted RBP18.19■□□□□ 0.5
RTN1-209ENST00000611068 WTAPQ15007 396 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 C15orf52Q6ZUT6 534 aaKnown RBP18.19■□□□□ 0.5
RTN1-209ENST00000611068 CEP120Q8N960 986 aa18.19■□□□□ 0.5
RTN1-209ENST00000611068 CHD4Q14839 1912 aa18.18■□□□□ 0.5
RTN1-209ENST00000611068 PDS5AQ29RF7 1337 aaKnown RBP18.18■□□□□ 0.5
RTN1-209ENST00000611068 ZBTB43O43298 467 aa18.18■□□□□ 0.5
RTN1-209ENST00000611068 IVLP07476 585 aa18.18■□□□□ 0.5
RTN1-209ENST00000611068 PICALMQ13492 652 aa18.18■□□□□ 0.5
RTN1-209ENST00000611068 AOC3Q16853 763 aa18.18■□□□□ 0.5
RTN1-209ENST00000611068 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
RTN1-209ENST00000611068 GOLGA8AA7E2F4 631 aa18.18■□□□□ 0.5
RTN1-209ENST00000611068 CDC25BP30305 580 aa18.18■□□□□ 0.5
RTN1-209ENST00000611068 PLCD1P51178 756 aa18.18■□□□□ 0.5
RTN1-209ENST00000611068 E4F1Q66K89 784 aaPredicted RBP18.18■□□□□ 0.5
RTN1-209ENST00000611068 RTFDC1Q9BY42 306 aaPredicted RBP18.18■□□□□ 0.5
RTN1-209ENST00000611068 TNMDQ9H2S6 317 aa18.18■□□□□ 0.5
RTN1-209ENST00000611068 TNKSO95271 1327 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 ZMYM6O95789 1325 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 hCG_1642624A0A1W2PR95 340 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 MNS1Q8NEH6 495 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 TTF2Q9UNY4 1162 aaKnown RBP18.17■□□□□ 0.5
RTN1-209ENST00000611068 MROH7-TTC4A0A0A0MT08 1334 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 ERICH2A1L162 156 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 NEMFO60524 1076 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 SLURP2P0DP57 97 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 EVCP57679 992 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 ESR2Q92731 530 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 TMEM87BQ96K49 555 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 PPP1R13BQ96KQ4 1090 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 CEP89Q96ST8 783 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 PLEKHA4Q9H4M7 779 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 RNF41Q9H4P4 317 aaPredicted RBP18.17■□□□□ 0.5
RTN1-209ENST00000611068 DACT1Q9NYF0 836 aa18.17■□□□□ 0.5
RTN1-209ENST00000611068 SALL1Q9NSC2 1324 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 KIF2AO00139 706 aaPredicted RBP18.16■□□□□ 0.5
RTN1-209ENST00000611068 ATP8B1O43520 1251 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 BAG3O95817 575 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 KIAA0825Q8IV33 1275 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 TEX11Q8IYF3 940 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 COA1Q9GZY4 146 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 SLX4Q8IY92 1834 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 TADA3O75528 432 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 POLR3DP05423 398 aaPredicted RBP18.16■□□□□ 0.5
RTN1-209ENST00000611068 GSTO1P78417 241 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 TTC6Q86TZ1 520 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 LLPHQ9BRT6 129 aaKnown RBP18.16■□□□□ 0.5
RTN1-209ENST00000611068 ATP8A2Q9NTI2 1148 aa18.16■□□□□ 0.5
RTN1-209ENST00000611068 PPP2R5AQ15172 486 aa18.15■□□□□ 0.5
RTN1-209ENST00000611068 TMC4Q7Z404 712 aa18.15■□□□□ 0.5
RTN1-209ENST00000611068 FBXL16Q8N461 479 aa18.15■□□□□ 0.5
RTN1-209ENST00000611068 FAM217BQ9NTX9 383 aaPredicted RBP18.15■□□□□ 0.5
RTN1-209ENST00000611068 ENAHQ8N8S7 591 aaPredicted RBP18.15■□□□□ 0.5
RTN1-209ENST00000611068 FUT8Q9BYC5 575 aa18.15■□□□□ 0.5
RTN1-209ENST00000611068 MYH2Q9UKX2 1941 aa18.14■□□□□ 0.5
RTN1-209ENST00000611068 CACNB3P54284 484 aa18.14■□□□□ 0.49
RTN1-209ENST00000611068 SYNE3Q6ZMZ3 975 aa18.14■□□□□ 0.49
RTN1-209ENST00000611068 SLC26A6Q9BXS9 759 aa18.14■□□□□ 0.49
RTN1-209ENST00000611068 ATP6V1DQ9Y5K8 247 aa18.14■□□□□ 0.49
RTN1-209ENST00000611068 TSPY2A6NKD2 308 aa18.14■□□□□ 0.49
RTN1-209ENST00000611068 DPEP1P16444 411 aa18.14■□□□□ 0.49
RTN1-209ENST00000611068 ZSCAN10Q96SZ4 725 aaPredicted RBP18.14■□□□□ 0.49
RTN1-209ENST00000611068 CARD6Q9BX69 1037 aa18.14■□□□□ 0.49
RTN1-209ENST00000611068 VPS18Q9P253 973 aa18.14■□□□□ 0.49
RTN1-209ENST00000611068 ANAPC4Q9UJX5 808 aa18.14■□□□□ 0.49
RTN1-209ENST00000611068 DAGLAQ9Y4D2 1042 aa18.14■□□□□ 0.49
RTN1-209ENST00000611068 DUOX1Q9NRD9 1551 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 CPP00450 1065 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 LDHCP07864 332 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 GUCY1A2P33402 732 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 RBM5P52756 815 aaKnown RBP eCLIP18.13■□□□□ 0.49
RTN1-209ENST00000611068 C8orf76Q96K31 380 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 KCND1Q9NSA2 647 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 NRXN2Q9P2S2 1712 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 FANCGO15287 622 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 SCP2P22307 547 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 RESTQ13127 1097 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 STYK1Q6J9G0 422 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 ZNF654Q8IZM8 581 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 KAT2BQ92831 832 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 MKNK2Q9HBH9 465 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 WDR19Q8NEZ3 1342 aa18.13■□□□□ 0.49
RTN1-209ENST00000611068 USP17L3A6NCW0 530 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 USP17L4A6NCW7 530 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 ECE2O60344 883 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms