RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 SWAP70Q9UH65 585 aa16.16■□□□□ 0.18
POLR2J3-219ENST00000608621 PFASO15067 1338 aa16.16■□□□□ 0.18
POLR2J3-219ENST00000608621 SOX1O00570 391 aaPredicted RBP16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 CHGBP05060 677 aa16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 COL6A1P12109 1028 aa16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 BMP8BP34820 402 aa16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 KIAA1755Q5JYT7 1200 aa16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 TMEM179Q6ZVK1 233 aa16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 SIAH1Q8IUQ4 282 aa16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 HAUS7Q99871 368 aa16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 MOV10L1Q9BXT6 1211 aaKnown RBP16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
POLR2J3-219ENST00000608621 SZT2Q5T011 3432 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 CYP2D7A0A087X1C5 515 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 USP17L12C9JPN9 530 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 USP17L21D6R901 530 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 HOXC6P09630 235 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 AKR1B1P15121 316 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 CNGA1P29973 690 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 CDK8P49336 464 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 GRB14Q14449 540 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 C12orf60Q5U649 245 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 TANGO6Q9C0B7 1094 aa16.14■□□□□ 0.17
POLR2J3-219ENST00000608621 SMARCA5O60264 1052 aaPredicted RBP16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 DSG3P32926 999 aa16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 CYP2C19P33261 490 aa16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 DPP9Q86TI2 863 aa16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 CLEC10AQ8IUN9 316 aa16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 LRCH3Q96II8 777 aa16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 ARHGEF10LQ9HCE6 1279 aa16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 TMX2Q9Y320 296 aa16.13■□□□□ 0.17
POLR2J3-219ENST00000608621 STRNO43815 780 aa16.12■□□□□ 0.17
POLR2J3-219ENST00000608621 MAGEA10P43363 369 aaPredicted RBP16.12■□□□□ 0.17
POLR2J3-219ENST00000608621 LRRC26Q2I0M4 334 aa16.12■□□□□ 0.17
POLR2J3-219ENST00000608621 C20orf194Q5TEA3 1177 aa16.12■□□□□ 0.17
POLR2J3-219ENST00000608621 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
POLR2J3-219ENST00000608621 SPICE1Q8N0Z3 855 aa16.12■□□□□ 0.17
POLR2J3-219ENST00000608621 SPATC1LQ9H0A9 340 aa16.12■□□□□ 0.17
POLR2J3-219ENST00000608621 DDX20Q9UHI6 824 aaKnown RBP16.12■□□□□ 0.17
POLR2J3-219ENST00000608621 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
POLR2J3-219ENST00000608621 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 FLOT1O75955 427 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 IGHA2P01877 340 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 ERCC3P19447 782 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 ADORA2AP29274 412 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 ICA1Q05084 483 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 PLS1Q14651 629 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 SHCBP1Q8NEM2 672 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 TRPV1Q8NER1 839 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 LPAR1Q92633 364 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 DDRGK1Q96HY6 314 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 SENP6Q9GZR1 1112 aaPredicted RBP16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 PUS7LQ9H0K6 701 aaKnown RBP16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 VCPKMTQ9H867 229 aa16.11■□□□□ 0.17
POLR2J3-219ENST00000608621 RLFQ13129 1914 aa16.1■□□□□ 0.17
POLR2J3-219ENST00000608621 MSCO60682 206 aa16.1■□□□□ 0.17
POLR2J3-219ENST00000608621 COBLO75128 1261 aa16.1■□□□□ 0.17
POLR2J3-219ENST00000608621 CTR9Q6PD62 1173 aa16.1■□□□□ 0.17
POLR2J3-219ENST00000608621 C16orf86Q6ZW13 317 aa16.1■□□□□ 0.17
POLR2J3-219ENST00000608621 MB21D1Q8N884 522 aa16.1■□□□□ 0.17
POLR2J3-219ENST00000608621 ATG4CQ96DT6 458 aa16.1■□□□□ 0.17
POLR2J3-219ENST00000608621 SH2D4AQ9H788 454 aa16.1■□□□□ 0.17
POLR2J3-219ENST00000608621 CYBAP13498 195 aa16.09■□□□□ 0.17
POLR2J3-219ENST00000608621 EEF2P13639 858 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-219ENST00000608621 OLFML2BQ68BL8 750 aa16.09■□□□□ 0.17
POLR2J3-219ENST00000608621 NCAPG2Q86XI2 1143 aa16.09■□□□□ 0.17
POLR2J3-219ENST00000608621 UBE2OQ9C0C9 1292 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-219ENST00000608621 MROH8Q9H579 483 aa16.09■□□□□ 0.17
POLR2J3-219ENST00000608621 MYH8P13535 1937 aa16.09■□□□□ 0.17
POLR2J3-219ENST00000608621 WDR46O15213 610 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-219ENST00000608621 TDHQ8IZJ6 230 aa16.08■□□□□ 0.16
POLR2J3-219ENST00000608621 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.16
POLR2J3-219ENST00000608621 ECHDC1Q9NTX5 307 aa16.08■□□□□ 0.16
POLR2J3-219ENST00000608621 SLC5A4Q9NY91 659 aa16.08■□□□□ 0.16
POLR2J3-219ENST00000608621 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-219ENST00000608621 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-219ENST00000608621 TMEM132BQ14DG7 1078 aa16.07■□□□□ 0.16
POLR2J3-219ENST00000608621 PRAMEF19Q5SWL8 479 aa16.07■□□□□ 0.16
POLR2J3-219ENST00000608621 GJC2Q5T442 439 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-219ENST00000608621 ANO1Q5XXA6 986 aa16.07■□□□□ 0.16
POLR2J3-219ENST00000608621 STRBPQ96SI9 672 aaKnown RBP16.07■□□□□ 0.16
POLR2J3-219ENST00000608621 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
POLR2J3-219ENST00000608621 MYH7P12883 1935 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 FRMPD3Q5JV73 1810 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 GSG1L2A8MUP6 293 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 DNM1LO00429 736 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 RAD21O60216 631 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 FCER1AP12319 257 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 LRIT3Q3SXY7 679 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 ABRAQ8N0Z2 381 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 STK11IPQ8N1F8 1099 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 ARRDC4Q8NCT1 418 aa16.06■□□□□ 0.16
POLR2J3-219ENST00000608621 DCTPP1Q9H773 170 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms