RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 POTEEQ6S8J3 1075 aa17.26■□□□□ 0.35
HDDC2-204ENST00000608295 CWC27Q6UX04 472 aaKnown RBP17.26■□□□□ 0.35
HDDC2-204ENST00000608295 SKAP1Q86WV1 359 aa17.26■□□□□ 0.35
HDDC2-204ENST00000608295 SIAH1Q8IUQ4 282 aa17.26■□□□□ 0.35
HDDC2-204ENST00000608295 COA7Q96BR5 231 aa17.26■□□□□ 0.35
HDDC2-204ENST00000608295 ARMC5Q96C12 935 aa17.26■□□□□ 0.35
HDDC2-204ENST00000608295 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.26■□□□□ 0.35
HDDC2-204ENST00000608295 PORCNQ9H237 461 aa17.26■□□□□ 0.35
HDDC2-204ENST00000608295 HELLSQ9NRZ9 838 aa17.26■□□□□ 0.35
HDDC2-204ENST00000608295 DIAPH3Q9NSV4 1193 aa17.26■□□□□ 0.35
HDDC2-204ENST00000608295 RBPJLQ9UBG7 517 aa17.26■□□□□ 0.35
HDDC2-204ENST00000608295 ISY1Q9ULR0 285 aaKnown RBP17.26■□□□□ 0.35
HDDC2-204ENST00000608295 CCDC171Q6TFL3 1326 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 SPDYE16A6NNV3 312 aaPredicted RBP17.25■□□□□ 0.35
HDDC2-204ENST00000608295 GNRH1P01148 92 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
HDDC2-204ENST00000608295 SDSP20132 328 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 GRK4P32298 578 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 HAND2P61296 217 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 ERVK-9P63128 1117 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 ERVK-24P63145 666 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 MTFR1Q15390 333 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 MCMDC2Q4G0Z9 681 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 CATSPERGQ6ZRH7 1159 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 CCAR1Q8IX12 1150 aaKnown RBP17.25■□□□□ 0.35
HDDC2-204ENST00000608295 LRRC47Q8N1G4 583 aaKnown RBP17.25■□□□□ 0.35
HDDC2-204ENST00000608295 GPRC5AQ8NFJ5 357 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 NUP88Q99567 741 aaPredicted RBP17.25■□□□□ 0.35
HDDC2-204ENST00000608295 OSBPL3Q9H4L5 887 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 TOMM22Q9NS69 142 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 LAMA4Q16363 1823 aa17.25■□□□□ 0.35
HDDC2-204ENST00000608295 ADCY3O60266 1144 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 CNMDO75829 334 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 FLOT1O75955 427 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 PRMT2P55345 433 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 Q3C1V9 767 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 ZNF444Q8N0Y2 327 aaPredicted RBP17.24■□□□□ 0.35
HDDC2-204ENST00000608295 SH2D4AQ9H788 454 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 KANSL2Q9H9L4 492 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 BTBD7Q9P203 1132 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 MORF4L1Q9UBU8 362 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 TMX2Q9Y320 296 aa17.24■□□□□ 0.35
HDDC2-204ENST00000608295 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
HDDC2-204ENST00000608295 TSPY3P0CV98 308 aa17.23■□□□□ 0.35
HDDC2-204ENST00000608295 TSPY8P0CW00 308 aa17.23■□□□□ 0.35
HDDC2-204ENST00000608295 EN2P19622 333 aaPredicted RBP17.23■□□□□ 0.35
HDDC2-204ENST00000608295 PLS1Q14651 629 aa17.23■□□□□ 0.35
HDDC2-204ENST00000608295 RRP12Q5JTH9 1297 aaKnown RBP17.23■□□□□ 0.35
HDDC2-204ENST00000608295 FAM83BQ5T0W9 1011 aa17.23■□□□□ 0.35
HDDC2-204ENST00000608295 ATG4CQ96DT6 458 aa17.23■□□□□ 0.35
HDDC2-204ENST00000608295 CEP95Q96GE4 821 aa17.23■□□□□ 0.35
HDDC2-204ENST00000608295 FBXO28Q9NVF7 368 aa17.23■□□□□ 0.35
HDDC2-204ENST00000608295 CLIP2Q9UDT6 1046 aa17.23■□□□□ 0.35
HDDC2-204ENST00000608295 MTMR7Q9Y216 660 aa17.23■□□□□ 0.35
HDDC2-204ENST00000608295 TACC3Q9Y6A5 838 aa17.23■□□□□ 0.35
HDDC2-204ENST00000608295 HSPD1P10809 573 aaKnown RBP17.22■□□□□ 0.35
HDDC2-204ENST00000608295 CYP2B6P20813 491 aa17.22■□□□□ 0.35
HDDC2-204ENST00000608295 PDE4BQ07343 736 aa17.22■□□□□ 0.35
HDDC2-204ENST00000608295 TTC22Q5TAA0 569 aa17.22■□□□□ 0.35
HDDC2-204ENST00000608295 TMEM106CQ9BVX2 250 aa17.22■□□□□ 0.35
HDDC2-204ENST00000608295 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
HDDC2-204ENST00000608295 TSPY2A6NKD2 308 aa17.21■□□□□ 0.35
HDDC2-204ENST00000608295 NMT2O60551 498 aa17.21■□□□□ 0.35
HDDC2-204ENST00000608295 INHAP05111 366 aa17.21■□□□□ 0.35
HDDC2-204ENST00000608295 TFAP4Q01664 338 aa17.21■□□□□ 0.35
HDDC2-204ENST00000608295 RASGRP2Q7LDG7 609 aa17.21■□□□□ 0.35
HDDC2-204ENST00000608295 IL25Q9H293 177 aa17.21■□□□□ 0.35
HDDC2-204ENST00000608295 ZNF287Q9HBT7 754 aa17.21■□□□□ 0.35
HDDC2-204ENST00000608295 WDR46O15213 610 aaKnown RBP17.2■□□□□ 0.34
HDDC2-204ENST00000608295 RANBP6O60518 1105 aaKnown RBP17.2■□□□□ 0.34
HDDC2-204ENST00000608295 NDUFB10O96000 172 aa17.2■□□□□ 0.34
HDDC2-204ENST00000608295 FGAP02671 866 aa17.2■□□□□ 0.34
HDDC2-204ENST00000608295 TRIM32Q13049 653 aa17.2■□□□□ 0.34
HDDC2-204ENST00000608295 GPR142Q7Z601 462 aa17.2■□□□□ 0.34
HDDC2-204ENST00000608295 SLAIN1Q8ND83 568 aa17.2■□□□□ 0.34
HDDC2-204ENST00000608295 GTF3C2Q8WUA4 911 aaPredicted RBP17.2■□□□□ 0.34
HDDC2-204ENST00000608295 LPAR1Q92633 364 aa17.2■□□□□ 0.34
HDDC2-204ENST00000608295 UNC93B1Q9H1C4 597 aa17.2■□□□□ 0.34
HDDC2-204ENST00000608295 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
HDDC2-204ENST00000608295 PLIN4Q96Q06 1357 aa17.19■□□□□ 0.34
HDDC2-204ENST00000608295 IGKV6D-41A0A0C4DH26 115 aa17.19■□□□□ 0.34
HDDC2-204ENST00000608295 CCL5P13501 91 aa17.19■□□□□ 0.34
HDDC2-204ENST00000608295 MAPK4P31152 587 aa17.19■□□□□ 0.34
HDDC2-204ENST00000608295 RGS19P49795 217 aa17.19■□□□□ 0.34
HDDC2-204ENST00000608295 COG2Q14746 738 aa17.19■□□□□ 0.34
HDDC2-204ENST00000608295 TBC1D10CQ8IV04 446 aa17.19■□□□□ 0.34
HDDC2-204ENST00000608295 RABGAP1Q9Y3P9 1069 aa17.19■□□□□ 0.34
HDDC2-204ENST00000608295 BRCA2P51587 3418 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 DSG3P32926 999 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 SLC4A3P48751 1232 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 UBXN2AP68543 259 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 PLEKHH3Q7Z736 793 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 NEDD1Q8NHV4 660 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 TRIB2Q92519 343 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 NBPF3Q9H094 633 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 RNF208Q9H0X6 261 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 MTMR4Q9NYA4 1195 aa17.18■□□□□ 0.34
HDDC2-204ENST00000608295 NYAP2Q9P242 653 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms