RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 C11orf57Q6ZUT1 292 aaPredicted RBP12.48□□□□□ -0.41
LINC01235-201ENST00000604724 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 CNKSR1Q969H4 720 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 TEKT1Q969V4 418 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 CEP95Q96GE4 821 aa12.48□□□□□ -0.41
LINC01235-201ENST00000604724 CYTH3O43739 400 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 ADCY5O95622 1261 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 GOLGA8HP0CJ92 632 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 CRKP46108 304 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 PLCB2Q00722 1185 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 SPECC1Q5M775 1068 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 HHIPL2Q6UWX4 724 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 JMYQ8N9B5 988 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 TNFRSF25Q93038 417 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 SDF4Q9BRK5 362 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 CPVLQ9H3G5 476 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 HPSEQ9Y251 543 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 MYH8P13535 1937 aa12.47□□□□□ -0.41
LINC01235-201ENST00000604724 C21orf2O43822 256 aa12.46□□□□□ -0.41
LINC01235-201ENST00000604724 CACNB3P54284 484 aa12.46□□□□□ -0.41
LINC01235-201ENST00000604724 RESP18Q5W5W9 173 aa12.46□□□□□ -0.41
LINC01235-201ENST00000604724 ZFPM1Q8IX07 1006 aa12.46□□□□□ -0.41
LINC01235-201ENST00000604724 HOMEZQ8IX15 550 aa12.46□□□□□ -0.41
LINC01235-201ENST00000604724 GPKOWQ92917 476 aaPredicted RBP eCLIP12.46□□□□□ -0.41
LINC01235-201ENST00000604724 ZNF165P49910 485 aa12.46□□□□□ -0.41
LINC01235-201ENST00000604724 CCDC178Q5BJE1 867 aa12.46□□□□□ -0.41
LINC01235-201ENST00000604724 STRIP1Q5VSL9 837 aa12.46□□□□□ -0.41
LINC01235-201ENST00000604724 TYW1BQ6NUM6 668 aa12.46□□□□□ -0.41
LINC01235-201ENST00000604724 CLEC10AQ8IUN9 316 aa12.46□□□□□ -0.41
LINC01235-201ENST00000604724 OSBPL5Q9H0X9 879 aaPredicted RBP12.46□□□□□ -0.41
LINC01235-201ENST00000604724 FBXO2Q9UK22 296 aaPredicted RBP12.46□□□□□ -0.41
LINC01235-201ENST00000604724 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.42
LINC01235-201ENST00000604724 PALM3A6NDB9 673 aaPredicted RBP12.45□□□□□ -0.42
LINC01235-201ENST00000604724 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
LINC01235-201ENST00000604724 AKR1B1P15121 316 aa12.45□□□□□ -0.42
LINC01235-201ENST00000604724 SYKP43405 635 aa12.45□□□□□ -0.42
LINC01235-201ENST00000604724 KRI1Q8N9T8 703 aaKnown RBP12.45□□□□□ -0.42
LINC01235-201ENST00000604724 FAM237AA0A1B0GTK4 181 aa12.45□□□□□ -0.42
LINC01235-201ENST00000604724 CUTAO60888 179 aa12.45□□□□□ -0.42
LINC01235-201ENST00000604724 KIAA2012Q0VF49 1180 aa12.45□□□□□ -0.42
LINC01235-201ENST00000604724 STX1AQ16623 288 aa12.45□□□□□ -0.42
LINC01235-201ENST00000604724 USP17L2Q6R6M4 530 aa12.45□□□□□ -0.42
LINC01235-201ENST00000604724 ZDHHC15Q96MV8 337 aa12.45□□□□□ -0.42
LINC01235-201ENST00000604724 SIPA1L1O43166 1804 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 PLIN4Q96Q06 1357 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 YDJCA8MPS7 323 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 PTPREP23469 700 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 BAG6P46379 1132 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 NOVP48745 357 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 NLRP5P59047 1200 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
LINC01235-201ENST00000604724 KIAA1468Q9P260 1216 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 SERPINB13Q9UIV8 391 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 SHMT1P34896 483 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
LINC01235-201ENST00000604724 IQCB1Q15051 598 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 BRMS1Q9HCU9 246 aa12.44□□□□□ -0.42
LINC01235-201ENST00000604724 TRIM75PA6NK02 468 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 KLRF2D3W0D1 207 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 PPIP5K2O43314 1243 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 TOP1P11387 765 aaKnown RBP12.43□□□□□ -0.42
LINC01235-201ENST00000604724 RBM5P52756 815 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC01235-201ENST00000604724 TCP10Q12799 353 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 SF3B2Q13435 895 aaKnown RBP12.43□□□□□ -0.42
LINC01235-201ENST00000604724 LONRF3Q496Y0 759 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 HS1BP3Q53T59 392 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 WWC2Q6AWC2 1192 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 PIK3AP1Q6ZUJ8 805 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 USP49Q70CQ1 688 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 ZSCAN30Q86W11 494 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 MTMR4Q9NYA4 1195 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 KCNH3Q9ULD8 1083 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 FAM196BA6NMK8 535 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 BIN1O00499 593 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 GNAQP50148 359 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 FKBP1AP62942 108 aaKnown RBP12.43□□□□□ -0.42
LINC01235-201ENST00000604724 DPCR1Q3MIW9 517 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 LRRC47Q8N1G4 583 aaKnown RBP12.43□□□□□ -0.42
LINC01235-201ENST00000604724 RASGRP4Q8TDF6 673 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 DNAJC18Q9H819 358 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 FAM198AQ9UFP1 575 aa12.43□□□□□ -0.42
LINC01235-201ENST00000604724 SRPRBQ9Y5M8 271 aaKnown RBP12.43□□□□□ -0.42
LINC01235-201ENST00000604724 COL4A5P29400 1685 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 IGKV6D-41A0A0C4DH26 115 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 USP17L5A8MUK1 530 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 PARP1P09874 1014 aaKnown RBP12.42□□□□□ -0.42
LINC01235-201ENST00000604724 KCNA3P22001 575 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 ZNF174Q15697 407 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 HEATR3Q7Z4Q2 680 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 TIGD1Q96MW7 591 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 CSRNP2Q9H175 543 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 ANO10Q9NW15 660 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
LINC01235-201ENST00000604724 DDTLA6NHG4 134 aaPredicted RBP12.42□□□□□ -0.42
LINC01235-201ENST00000604724 FOXN1O15353 648 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 PTMAP06454 111 aaKnown RBP12.42□□□□□ -0.42
LINC01235-201ENST00000604724 PNOCQ13519 176 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 SHROOM1Q2M3G4 852 aaPredicted RBP12.42□□□□□ -0.42
LINC01235-201ENST00000604724 SH3BP5LQ7L8J4 393 aa12.42□□□□□ -0.42
LINC01235-201ENST00000604724 METTL16Q86W50 562 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms