RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 FANCBQ8NB91 859 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 NUP88Q99567 741 aaPredicted RBP17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 VPS16Q9H269 839 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 GREM2Q9H772 168 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 CORO7P57737 925 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 TRIM14Q14142 442 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 STAG1Q8WVM7 1258 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 ARMT1Q9H993 441 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 CNNM1Q9NRU3 951 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 TRIM10Q9UDY6 481 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 MYH8P13535 1937 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 ADAMTSL3P82987 1691 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 ZC3H4Q9UPT8 1303 aaKnown RBP17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 KRT9P35527 623 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 FERMT2Q96AC1 680 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 CHP1Q99653 195 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
LYSMD4-211ENST00000604213 PSMD14O00487 310 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 WNT7AO00755 349 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 UQCRFS1P1P0C7P4 283 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 RCAN1P53805 252 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 PACS2Q86VP3 889 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 ZNF654Q8IZM8 581 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 CABLES1Q8TDN4 633 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 AFAP1L1Q8TED9 768 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 RWDD2AQ9UIY3 292 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 HPCAL4Q9UM19 191 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 EPN1Q9Y6I3 576 aaPredicted RBP17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 XDHP47989 1333 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 CHD4Q14839 1912 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 PRKAB2O43741 272 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 PPFIA4O75335 1185 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 PDE8BO95263 885 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 NDUFA10O95299 355 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 AKAP17AQ02040 695 aaKnown RBP17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 TCP11X2Q5H9J9 407 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 TMTC2Q8N394 836 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 MAGEB6Q8N7X4 407 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 STAMQ92783 540 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 HDAC6Q9UBN7 1215 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 GUCA1BQ9UMX6 200 aa17.22■□□□□ 0.35
LYSMD4-211ENST00000604213 SPAG1Q07617 926 aa17.21■□□□□ 0.35
LYSMD4-211ENST00000604213 TTC31Q49AM3 519 aaPredicted RBP17.21■□□□□ 0.35
LYSMD4-211ENST00000604213 RRAGBQ5VZM2 374 aa17.21■□□□□ 0.35
LYSMD4-211ENST00000604213 MMS19Q96T76 1030 aa17.21■□□□□ 0.35
LYSMD4-211ENST00000604213 TOMM22Q9NS69 142 aa17.21■□□□□ 0.35
LYSMD4-211ENST00000604213 VPS54Q9P1Q0 977 aa17.21■□□□□ 0.35
LYSMD4-211ENST00000604213 ERICH2A1L162 156 aa17.21■□□□□ 0.34
LYSMD4-211ENST00000604213 ANKRD18BA2A2Z9 1011 aa17.21■□□□□ 0.34
LYSMD4-211ENST00000604213 MTA3Q9BTC8 594 aa17.21■□□□□ 0.34
LYSMD4-211ENST00000604213 PHF20Q9BVI0 1012 aa17.21■□□□□ 0.34
LYSMD4-211ENST00000604213 RNF26Q9BY78 433 aaPredicted RBP17.21■□□□□ 0.34
LYSMD4-211ENST00000604213 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.34
LYSMD4-211ENST00000604213 CDHR2Q9BYE9 1310 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 KCNJ18B7U540 433 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 MCM3P25205 808 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 KRT2P35908 639 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 KCNJ12Q14500 433 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 E2F4Q16254 413 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 PKN1Q16512 942 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 BLZF1Q9H2G9 400 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 PLEKHA4Q9H4M7 779 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 ENC1O14682 589 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 BMP15O95972 392 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 PAK1Q13153 545 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 MAP9Q49MG5 647 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 HAUS4Q9H6D7 363 aa17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
LYSMD4-211ENST00000604213 PCDH11XQ9BZA7 1347 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 PCDH11YQ9BZA8 1340 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 TNS2Q63HR2 1409 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 TNS3Q68CZ2 1445 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 PAPPAQ13219 1627 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 TARSL2A2RTX5 802 aaKnown RBP17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 ANKRD65E5RJM6 399 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 ATP1A1P05023 1023 aaKnown RBP17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 CTSWP56202 376 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 ZNF174Q15697 407 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 PAPD7Q5XG87 772 aaKnown RBP17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 ICE2Q659A1 982 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 ZCRB1Q8TBF4 217 aaKnown RBP17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 COG1Q8WTW3 980 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 NELFBQ8WX92 580 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 PPM1EQ8WY54 764 aa17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 DDX17Q92841 729 aaKnown RBP17.19■□□□□ 0.34
LYSMD4-211ENST00000604213 TDO2P48775 406 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 HERVK_113P62684 666 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 MAP3K12Q12852 859 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 STIM1Q13586 685 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 PDXDC2PQ6P474 469 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 KIF6Q6ZMV9 814 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 ANKRD20A12PQ8NF67 263 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 MTRQ99707 1265 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 SAR1BQ9Y6B6 198 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms