RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 KLRC3Q07444 240 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.51□□□□□ -0.89
NOLC1-208ENST00000603946 CNNM2Q9H8M5 875 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 PICK1Q9NRD5 415 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 HOMER2Q9NSB8 354 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 ANAPC4Q9UJX5 808 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 V9GY48 417 aaPredicted RBP9.51□□□□□ -0.89
NOLC1-208ENST00000603946 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 K7ELQ4 463 aaPredicted RBP9.51□□□□□ -0.89
NOLC1-208ENST00000603946 NF2P35240 595 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 METAP2P50579 478 aaKnown RBP eCLIP9.51□□□□□ -0.89
NOLC1-208ENST00000603946 SEC23AQ15436 765 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 FAM83BQ5T0W9 1011 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 CYP4F22Q6NT55 531 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 GPKOWQ92917 476 aaPredicted RBP eCLIP9.51□□□□□ -0.89
NOLC1-208ENST00000603946 KIFC2Q96AC6 838 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 WNK4Q96J92 1243 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 SLC26A6Q9BXS9 759 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 HPS5Q9UPZ3 1129 aa9.51□□□□□ -0.89
NOLC1-208ENST00000603946 ATP2B1P20020 1258 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 ANAPC15P60006 121 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 GADL1Q6ZQY3 521 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 LDHDQ86WU2 507 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 NEDD1Q8NHV4 660 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 SLC10A4Q96EP9 437 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 CSADQ9Y600 493 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 TMEM232C9JQI7 657 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 ADAMTS3O15072 1205 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 PTPRAP18433 802 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 SLC1A4P43007 532 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 USH1GQ495M9 461 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 TATDN1Q6P1N9 297 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 CCDC174Q6PII3 467 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 SYNE3Q6ZMZ3 975 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 KCNB2Q92953 911 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 OPTNQ96CV9 577 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 IPO9Q96P70 1041 aaKnown RBP9.5□□□□□ -0.89
NOLC1-208ENST00000603946 TANGO6Q9C0B7 1094 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 ZNF157P51786 506 aaPredicted RBP9.5□□□□□ -0.89
NOLC1-208ENST00000603946 TSGA10IPQ3SY00 556 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 CATIPQ7Z7H3 387 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 R3HDMLQ9H3Y0 253 aa9.5□□□□□ -0.89
NOLC1-208ENST00000603946 GBA2Q9HCG7 927 aaPredicted RBP9.5□□□□□ -0.89
NOLC1-208ENST00000603946 VPS37CA5D8V6 355 aaPredicted RBP9.49□□□□□ -0.89
NOLC1-208ENST00000603946 ORC4O43929 436 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 CTDNEP1O95476 244 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 TTLL1O95922 423 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 NDUFB10O96000 172 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 SLFN13Q68D06 897 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 FANCBQ8NB91 859 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 TSKSQ9UJT2 592 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 KCNJ14Q9UNX9 436 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 DICER1Q9UPY3 1922 aaKnown RBP9.49□□□□□ -0.89
NOLC1-208ENST00000603946 CYP2C8P10632 490 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 GJA5P36382 358 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 MAP3K9P80192 1104 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 CEBPZQ03701 1054 aaKnown RBP9.49□□□□□ -0.89
NOLC1-208ENST00000603946 TROAPQ12815 778 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 PLS1Q14651 629 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 SLC35G1Q2M3R5 365 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 TREML2Q5T2D2 321 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 MCTP1Q6DN14 999 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 SRBD1Q8N5C6 995 aaKnown RBP9.49□□□□□ -0.89
NOLC1-208ENST00000603946 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.49□□□□□ -0.89
NOLC1-208ENST00000603946 ZNF287Q9HBT7 754 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 FAM217BQ9NTX9 383 aaPredicted RBP9.49□□□□□ -0.89
NOLC1-208ENST00000603946 HERC5Q9UII4 1024 aaKnown RBP9.49□□□□□ -0.89
NOLC1-208ENST00000603946 SNCAIPQ9Y6H5 919 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 SSC5DA1L4H1 1573 aa9.49□□□□□ -0.89
NOLC1-208ENST00000603946 USP17L10C9JJH3 530 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 KLRF2D3W0D1 207 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 GJB2P29033 226 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 WDR78Q5VTH9 848 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 DCAF15Q66K64 600 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 COA7Q96BR5 231 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 KANSL2Q9H9L4 492 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 AOC2O75106 756 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 ASNSP08243 561 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 HMGB1P09429 215 aaKnown RBP9.48□□□□□ -0.89
NOLC1-208ENST00000603946 RTN1Q16799 776 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 TMEM179Q6ZVK1 233 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 C2orf69Q8N8R5 385 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 PGBD1Q96JS3 809 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 TM6SF1Q9BZW5 370 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 ZNF646O15015 1829 aaPredicted RBP9.48□□□□□ -0.89
NOLC1-208ENST00000603946 CDK5RAP2Q96SN8 1893 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 CYTH3O43739 400 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 IREB2P48200 963 aaKnown RBP9.48□□□□□ -0.89
NOLC1-208ENST00000603946 ATRNL1Q5VV63 1379 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 SCYL3Q8IZE3 742 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 ZC3H15Q8WU90 426 aaKnown RBP9.48□□□□□ -0.89
NOLC1-208ENST00000603946 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 VPS54Q9P1Q0 977 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 SWAP70Q9UH65 585 aa9.48□□□□□ -0.89
NOLC1-208ENST00000603946 PTPDC1A2A3K4 754 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 PDHBP11177 359 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 NOM1Q5C9Z4 860 aaKnown RBP9.47□□□□□ -0.89
NOLC1-208ENST00000603946 FKBP1CQ5VVH2 108 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 CERS3Q8IU89 383 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms