RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 MIPEPQ99797 713 aa6.78□□□□□ -1.32
FOCAD-208ENST00000603648 KLHL3Q9UH77 587 aa6.78□□□□□ -1.32
FOCAD-208ENST00000603648 PPT2Q9UMR5 302 aa6.78□□□□□ -1.32
FOCAD-208ENST00000603648 NASPP49321 788 aaPredicted RBP6.77□□□□□ -1.33
FOCAD-208ENST00000603648 XAGE3Q8WTP9 111 aa6.77□□□□□ -1.33
FOCAD-208ENST00000603648 BCL7CQ8WUZ0 217 aaPredicted RBP6.77□□□□□ -1.33
FOCAD-208ENST00000603648 C8orf37Q96NL8 207 aa6.77□□□□□ -1.33
FOCAD-208ENST00000603648 FERD3LQ96RJ6 166 aa6.77□□□□□ -1.33
FOCAD-208ENST00000603648 CNNM2Q9H8M5 875 aa6.77□□□□□ -1.33
FOCAD-208ENST00000603648 IGF2BP3O00425 579 aaKnown RBP eCLIP6.76□□□□□ -1.33
FOCAD-208ENST00000603648 TSPAN15O95858 294 aa6.76□□□□□ -1.33
FOCAD-208ENST00000603648 ARSHQ5FYA8 562 aa6.76□□□□□ -1.33
FOCAD-208ENST00000603648 VPS37DQ86XT2 251 aa6.76□□□□□ -1.33
FOCAD-208ENST00000603648 DNAJB8Q8NHS0 232 aa6.76□□□□□ -1.33
FOCAD-208ENST00000603648 RIN3Q8TB24 985 aa6.76□□□□□ -1.33
FOCAD-208ENST00000603648 PPP1R13LQ8WUF5 828 aa6.76□□□□□ -1.33
FOCAD-208ENST00000603648 ATG4CQ96DT6 458 aa6.76□□□□□ -1.33
FOCAD-208ENST00000603648 ANTXR1Q9H6X2 564 aa6.76□□□□□ -1.33
FOCAD-208ENST00000603648 STRIP2Q9ULQ0 834 aa6.76□□□□□ -1.33
FOCAD-208ENST00000603648 PSPNO60542 156 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 NME1P15531 152 aaKnown RBP6.75□□□□□ -1.33
FOCAD-208ENST00000603648 MLANAQ16655 118 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 NAALADL2Q58DX5 795 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 ZNF746Q6NUN9 644 aaPredicted RBP6.75□□□□□ -1.33
FOCAD-208ENST00000603648 NLRC3Q7RTR2 1065 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 SPRED2Q7Z698 418 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 CCDC74BQ96LY2 380 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 HEXIM2Q96MH2 286 aaKnown RBP6.75□□□□□ -1.33
FOCAD-208ENST00000603648 PPP1R16BQ96T49 567 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 GMLQ99445 158 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 SRRTQ9BXP5 876 aaKnown RBP6.75□□□□□ -1.33
FOCAD-208ENST00000603648 MKNK2Q9HBH9 465 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 CEP131Q9UPN4 1083 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 MAPK8IP1Q9UQF2 711 aa6.75□□□□□ -1.33
FOCAD-208ENST00000603648 TNFRSF10CO14798 259 aa6.74□□□□□ -1.33
FOCAD-208ENST00000603648 RGS13O14921 159 aa6.74□□□□□ -1.33
FOCAD-208ENST00000603648 RAG1P15918 1043 aa6.74□□□□□ -1.33
FOCAD-208ENST00000603648 GIPRP48546 466 aa6.74□□□□□ -1.33
FOCAD-208ENST00000603648 ARID5AQ03989 594 aa6.74□□□□□ -1.33
FOCAD-208ENST00000603648 CCDC81Q6ZN84 652 aa6.74□□□□□ -1.33
FOCAD-208ENST00000603648 DBX2Q6ZNG2 339 aa6.74□□□□□ -1.33
FOCAD-208ENST00000603648 C22orf34Q6ZV56 151 aa6.74□□□□□ -1.33
FOCAD-208ENST00000603648 LSRQ86X29 649 aaPredicted RBP6.74□□□□□ -1.33
FOCAD-208ENST00000603648 PHACTR4Q8IZ21 702 aa6.74□□□□□ -1.33
FOCAD-208ENST00000603648 TAB3Q8N5C8 712 aaPredicted RBP6.74□□□□□ -1.33
FOCAD-208ENST00000603648 PRDM5Q9NQX1 630 aaPredicted RBP6.74□□□□□ -1.33
FOCAD-208ENST00000603648 FGRP09769 529 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 CCNFP41002 786 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 ETV3P41162 512 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 OXCT1P55809 520 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 EIF6P56537 245 aaKnown RBP6.73□□□□□ -1.33
FOCAD-208ENST00000603648 FBXW10Q5XX13 1052 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 INTS3Q68E01 1043 aaKnown RBP6.73□□□□□ -1.33
FOCAD-208ENST00000603648 CDH24Q86UP0 819 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 OR6P1Q8NGX9 317 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 BAHD1Q8TBE0 780 aaPredicted RBP6.73□□□□□ -1.33
FOCAD-208ENST00000603648 SHDQ96IW2 340 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 COX4I2Q96KJ9 171 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 KIF2CQ99661 725 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 TM9SF2Q99805 663 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.73□□□□□ -1.33
FOCAD-208ENST00000603648 TPX2Q9ULW0 747 aaKnown RBP6.73□□□□□ -1.33
FOCAD-208ENST00000603648 U3KQE9 123 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 CNTNAP4Q9C0A0 1308 aa6.73□□□□□ -1.33
FOCAD-208ENST00000603648 UBOX5O94941 541 aa6.72□□□□□ -1.33
FOCAD-208ENST00000603648 RNASE1P07998 156 aaKnown RBP6.72□□□□□ -1.33
FOCAD-208ENST00000603648 CYP7A1P22680 504 aa6.72□□□□□ -1.33
FOCAD-208ENST00000603648 KRTAP1-1Q07627 177 aa6.72□□□□□ -1.33
FOCAD-208ENST00000603648 SFRP5Q5T4F7 317 aa6.72□□□□□ -1.33
FOCAD-208ENST00000603648 STK11IPQ8N1F8 1099 aa6.72□□□□□ -1.33
FOCAD-208ENST00000603648 CRBNQ96SW2 442 aa6.72□□□□□ -1.33
FOCAD-208ENST00000603648 ACRP10323 421 aa6.71□□□□□ -1.34
FOCAD-208ENST00000603648 POLR2BP30876 1174 aaKnown RBP6.71□□□□□ -1.34
FOCAD-208ENST00000603648 GBP1P32455 592 aa6.71□□□□□ -1.34
FOCAD-208ENST00000603648 MCF2L2Q86YR7 1114 aa6.71□□□□□ -1.34
FOCAD-208ENST00000603648 WFDC3Q8IUB2 231 aa6.71□□□□□ -1.34
FOCAD-208ENST00000603648 FAM181AQ8N9Y4 354 aa6.71□□□□□ -1.34
FOCAD-208ENST00000603648 RNF141Q8WVD5 230 aa6.71□□□□□ -1.34
FOCAD-208ENST00000603648 CPLX3Q8WVH0 158 aa6.71□□□□□ -1.34
FOCAD-208ENST00000603648 SLC9A7Q96T83 725 aa6.71□□□□□ -1.34
FOCAD-208ENST00000603648 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.71□□□□□ -1.34
FOCAD-208ENST00000603648 FAM53CQ9NYF3 392 aa6.71□□□□□ -1.34
FOCAD-208ENST00000603648 CEACAM5P06731 702 aa6.7□□□□□ -1.34
FOCAD-208ENST00000603648 GUCY2CP25092 1073 aa6.7□□□□□ -1.34
FOCAD-208ENST00000603648 DNAJA1P31689 397 aaKnown RBP6.7□□□□□ -1.34
FOCAD-208ENST00000603648 KIR3DL1P43629 444 aa6.7□□□□□ -1.34
FOCAD-208ENST00000603648 RUFY4Q6ZNE9 571 aa6.7□□□□□ -1.34
FOCAD-208ENST00000603648 C19orf47Q8N9M1 422 aaKnown RBP6.7□□□□□ -1.34
FOCAD-208ENST00000603648 LRRN4CLQ8ND94 238 aa6.7□□□□□ -1.34
FOCAD-208ENST00000603648 VWCEQ96DN2 955 aa6.7□□□□□ -1.34
FOCAD-208ENST00000603648 KREMEN1Q96MU8 473 aa6.7□□□□□ -1.34
FOCAD-208ENST00000603648 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.7□□□□□ -1.34
FOCAD-208ENST00000603648 TNKS2Q9H2K2 1166 aa6.7□□□□□ -1.34
FOCAD-208ENST00000603648 MBNL3Q9NUK0 354 aaKnown RBP6.7□□□□□ -1.34
FOCAD-208ENST00000603648 GNAT3A8MTJ3 354 aa6.69□□□□□ -1.34
FOCAD-208ENST00000603648 PRR33A8MZF0 331 aa6.69□□□□□ -1.34
FOCAD-208ENST00000603648 SSBP05455 408 aaKnown RBP eCLIP6.69□□□□□ -1.34
FOCAD-208ENST00000603648 FUT4P22083 530 aa6.69□□□□□ -1.34
FOCAD-208ENST00000603648 BNIP3Q12983 259 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms