RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 DDRGK1Q96HY6 314 aa21.52■■□□□ 1.04
SHKBP1-227ENST00000602011 UBE2OQ9C0C9 1292 aaKnown RBP21.52■■□□□ 1.04
SHKBP1-227ENST00000602011 TCRBV5S4A2TA0A5A2 114 aa21.51■■□□□ 1.03
SHKBP1-227ENST00000602011 SPDYE16A6NNV3 312 aaPredicted RBP21.51■■□□□ 1.03
SHKBP1-227ENST00000602011 MPHOSPH10O00566 681 aaKnown RBP21.51■■□□□ 1.03
SHKBP1-227ENST00000602011 ATP5JP18859 108 aa21.51■■□□□ 1.03
SHKBP1-227ENST00000602011 LRRC26Q2I0M4 334 aa21.51■■□□□ 1.03
SHKBP1-227ENST00000602011 WDR78Q5VTH9 848 aa21.51■■□□□ 1.03
SHKBP1-227ENST00000602011 TDHQ8IZJ6 230 aa21.51■■□□□ 1.03
SHKBP1-227ENST00000602011 MYH1P12882 1939 aa21.51■■□□□ 1.03
SHKBP1-227ENST00000602011 LRIT3Q3SXY7 679 aa21.5■■□□□ 1.03
SHKBP1-227ENST00000602011 ZSCAN25Q6NSZ9 544 aa21.5■■□□□ 1.03
SHKBP1-227ENST00000602011 DNAJC2Q99543 621 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-227ENST00000602011 ARHGEF10LQ9HCE6 1279 aa21.5■■□□□ 1.03
SHKBP1-227ENST00000602011 PAG1Q9NWQ8 432 aa21.5■■□□□ 1.03
SHKBP1-227ENST00000602011 BTBD7Q9P203 1132 aa21.5■■□□□ 1.03
SHKBP1-227ENST00000602011 MDM2Q00987 491 aaPredicted RBP21.49■■□□□ 1.03
SHKBP1-227ENST00000602011 DPP9Q86TI2 863 aa21.49■■□□□ 1.03
SHKBP1-227ENST00000602011 ABRAQ8N0Z2 381 aa21.49■■□□□ 1.03
SHKBP1-227ENST00000602011 MROH8Q9H579 483 aa21.49■■□□□ 1.03
SHKBP1-227ENST00000602011 FLRT1Q9NZU1 646 aa21.49■■□□□ 1.03
SHKBP1-227ENST00000602011 DDX20Q9UHI6 824 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-227ENST00000602011 CUL9Q8IWT3 2517 aa21.48■■□□□ 1.03
SHKBP1-227ENST00000602011 ADD2P35612 726 aa21.48■■□□□ 1.03
SHKBP1-227ENST00000602011 UBE3CQ15386 1083 aa21.48■■□□□ 1.03
SHKBP1-227ENST00000602011 OLFML2BQ68BL8 750 aa21.48■■□□□ 1.03
SHKBP1-227ENST00000602011 MTMR10Q9NXD2 777 aa21.48■■□□□ 1.03
SHKBP1-227ENST00000602011 TMX2Q9Y320 296 aa21.48■■□□□ 1.03
SHKBP1-227ENST00000602011 A0A1W2PRG0 241 aa21.47■■□□□ 1.03
SHKBP1-227ENST00000602011 SIRT2Q8IXJ6 389 aa21.47■■□□□ 1.03
SHKBP1-227ENST00000602011 LCORLQ8N3X6 602 aa21.47■■□□□ 1.03
SHKBP1-227ENST00000602011 ARRDC4Q8NCT1 418 aa21.47■■□□□ 1.03
SHKBP1-227ENST00000602011 SDR42E1Q8WUS8 393 aa21.47■■□□□ 1.03
SHKBP1-227ENST00000602011 HAUS7Q99871 368 aa21.47■■□□□ 1.03
SHKBP1-227ENST00000602011 TANGO6Q9C0B7 1094 aa21.47■■□□□ 1.03
SHKBP1-227ENST00000602011 SPATC1LQ9H0A9 340 aa21.47■■□□□ 1.03
SHKBP1-227ENST00000602011 APBB1O00213 710 aa21.46■■□□□ 1.03
SHKBP1-227ENST00000602011 IGHA2P01877 340 aa21.46■■□□□ 1.03
SHKBP1-227ENST00000602011 DSG3P32926 999 aa21.46■■□□□ 1.03
SHKBP1-227ENST00000602011 MOV10L1Q9BXT6 1211 aaKnown RBP21.46■■□□□ 1.03
SHKBP1-227ENST00000602011 BOLA2Q9H3K6 86 aa21.46■■□□□ 1.03
SHKBP1-227ENST00000602011 COG6Q9Y2V7 657 aa21.46■■□□□ 1.03
SHKBP1-227ENST00000602011 DNAH12Q6ZR08 3092 aa21.45■■□□□ 1.02
SHKBP1-227ENST00000602011 DNM1LO00429 736 aa21.45■■□□□ 1.02
SHKBP1-227ENST00000602011 SLC25A27O95847 323 aa21.45■■□□□ 1.02
SHKBP1-227ENST00000602011 C12orf60Q5U649 245 aa21.45■■□□□ 1.02
SHKBP1-227ENST00000602011 VCPKMTQ9H867 229 aa21.45■■□□□ 1.02
SHKBP1-227ENST00000602011 ARMT1Q9H993 441 aa21.45■■□□□ 1.02
SHKBP1-227ENST00000602011 KANSL2Q9H9L4 492 aa21.45■■□□□ 1.02
SHKBP1-227ENST00000602011 FRMPD3Q5JV73 1810 aa21.44■■□□□ 1.02
SHKBP1-227ENST00000602011 WDR46O15213 610 aaKnown RBP21.44■■□□□ 1.02
SHKBP1-227ENST00000602011 ADORA2AP29274 412 aa21.44■■□□□ 1.02
SHKBP1-227ENST00000602011 CNGA1P29973 690 aa21.44■■□□□ 1.02
SHKBP1-227ENST00000602011 ICA1Q05084 483 aa21.44■■□□□ 1.02
SHKBP1-227ENST00000602011 NPLOC4Q8TAT6 608 aa21.44■■□□□ 1.02
SHKBP1-227ENST00000602011 MBD4O95243 580 aa21.43■■□□□ 1.02
SHKBP1-227ENST00000602011 ERCC3P19447 782 aa21.43■■□□□ 1.02
SHKBP1-227ENST00000602011 ATN1P54259 1190 aaPredicted RBP21.43■■□□□ 1.02
SHKBP1-227ENST00000602011 EVX2Q03828 476 aa21.43■■□□□ 1.02
SHKBP1-227ENST00000602011 LRRCC1Q9C099 1032 aa21.43■■□□□ 1.02
SHKBP1-227ENST00000602011 SENP6Q9GZR1 1112 aaPredicted RBP21.43■■□□□ 1.02
SHKBP1-227ENST00000602011 NRBP1Q9UHY1 535 aa21.43■■□□□ 1.02
SHKBP1-227ENST00000602011 STXBP5LQ9Y2K9 1186 aa21.43■■□□□ 1.02
SHKBP1-227ENST00000602011 USP17L12C9JPN9 530 aa21.42■■□□□ 1.02
SHKBP1-227ENST00000602011 USP17L21D6R901 530 aa21.42■■□□□ 1.02
SHKBP1-227ENST00000602011 FLOT1O75955 427 aa21.42■■□□□ 1.02
SHKBP1-227ENST00000602011 CYP2C19P33261 490 aa21.42■■□□□ 1.02
SHKBP1-227ENST00000602011 COPB2P35606 906 aa21.42■■□□□ 1.02
SHKBP1-227ENST00000602011 CDK8P49336 464 aa21.42■■□□□ 1.02
SHKBP1-227ENST00000602011 C16orf86Q6ZW13 317 aa21.42■■□□□ 1.02
SHKBP1-227ENST00000602011 SIAH1Q8IUQ4 282 aa21.42■■□□□ 1.02
SHKBP1-227ENST00000602011 LBHD1Q9BQE6 289 aaPredicted RBP21.42■■□□□ 1.02
SHKBP1-227ENST00000602011 SEPT4O43236 478 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 FCER1AP12319 257 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 CYBAP13498 195 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 GIMAP6Q6P9H5 292 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 TRPV1Q8NER1 839 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 DYNLL2Q96FJ2 89 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 FAM161BQ96MY7 647 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 GOPCQ9HD26 462 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 PRKAG2Q9UGJ0 569 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 RCAN3Q9UKA8 241 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 ADAMTS5Q9UNA0 930 aa21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 LAMA2P24043 3122 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-227ENST00000602011 PRKAB2O43741 272 aa21.4■■□□□ 1.02
SHKBP1-227ENST00000602011 CYP2D6P10635 497 aa21.4■■□□□ 1.02
SHKBP1-227ENST00000602011 AKR1B1P15121 316 aa21.4■■□□□ 1.02
SHKBP1-227ENST00000602011 SLC44A5Q8NCS7 719 aa21.4■■□□□ 1.02
SHKBP1-227ENST00000602011 DIS3Q9Y2L1 958 aaKnown RBP21.4■■□□□ 1.02
SHKBP1-227ENST00000602011 SLC4A4Q9Y6R1 1079 aa21.4■■□□□ 1.02
SHKBP1-227ENST00000602011 UNC80Q8N2C7 3258 aa21.39■■□□□ 1.02
SHKBP1-227ENST00000602011 PLS1Q14651 629 aa21.39■■□□□ 1.01
SHKBP1-227ENST00000602011 ANO1Q5XXA6 986 aa21.39■■□□□ 1.01
SHKBP1-227ENST00000602011 NCAPG2Q86XI2 1143 aa21.39■■□□□ 1.01
SHKBP1-227ENST00000602011 ARPP21Q9UBL0 812 aaPredicted RBP21.39■■□□□ 1.01
SHKBP1-227ENST00000602011 KBTBD13C9JR72 458 aa21.38■■□□□ 1.01
SHKBP1-227ENST00000602011 LRRFIP1Q32MZ4 808 aaKnown RBP21.38■■□□□ 1.01
SHKBP1-227ENST00000602011 SBK1Q52WX2 424 aa21.38■■□□□ 1.01
SHKBP1-227ENST00000602011 GPATCH3Q96I76 525 aa21.38■■□□□ 1.01
SHKBP1-227ENST00000602011 ZNF287Q9HBT7 754 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms