RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 SPDYE16A6NNV3 312 aaPredicted RBP11.56□□□□□ -0.56
VRK3-224ENST00000601849 GOLIM4O00461 696 aa11.56□□□□□ -0.56
VRK3-224ENST00000601849 RAB11FIP3O75154 756 aa11.56□□□□□ -0.56
VRK3-224ENST00000601849 CNMDO75829 334 aa11.56□□□□□ -0.56
VRK3-224ENST00000601849 PDE6AP16499 860 aa11.56□□□□□ -0.56
VRK3-224ENST00000601849 CYP2C19P33261 490 aa11.56□□□□□ -0.56
VRK3-224ENST00000601849 OLFML2BQ68BL8 750 aa11.56□□□□□ -0.56
VRK3-224ENST00000601849 ZSCAN25Q6NSZ9 544 aa11.56□□□□□ -0.56
VRK3-224ENST00000601849 SPATC1LQ9H0A9 340 aa11.56□□□□□ -0.56
VRK3-224ENST00000601849 ZNF532Q9HCE3 1301 aa11.56□□□□□ -0.56
VRK3-224ENST00000601849 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
VRK3-224ENST00000601849 DDX60LQ5H9U9 1706 aaKnown RBP11.55□□□□□ -0.56
VRK3-224ENST00000601849 A0A0C4DFX4 3053 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 APBB1O00213 710 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 FLOT1O75955 427 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 SLC25A27O95847 323 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 MYCNP04198 464 aaPredicted RBP11.55□□□□□ -0.56
VRK3-224ENST00000601849 FCER1AP12319 257 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 ADORA2AP29274 412 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
VRK3-224ENST00000601849 GABPAQ06546 454 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 NCAPG2Q86XI2 1143 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 ABRAQ8N0Z2 381 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 MOV10L1Q9BXT6 1211 aaKnown RBP11.55□□□□□ -0.56
VRK3-224ENST00000601849 FLRT1Q9NZU1 646 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 DDX19BQ9UMR2 479 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 DNAH12Q6ZR08 3092 aa11.55□□□□□ -0.56
VRK3-224ENST00000601849 MYH1P12882 1939 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 PLXNB2O15031 1838 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 SIPA1L1O43166 1804 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 SEPT4O43236 478 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 RLBP1P12271 317 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 ERCC3P19447 782 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 DSG3P32926 999 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
VRK3-224ENST00000601849 NPLOC4Q8TAT6 608 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 SDR42E1Q8WUS8 393 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 DCP1AQ9NPI6 582 aaPredicted RBP11.54□□□□□ -0.56
VRK3-224ENST00000601849 PAG1Q9NWQ8 432 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 MTMR10Q9NXD2 777 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 TMX2Q9Y320 296 aa11.54□□□□□ -0.56
VRK3-224ENST00000601849 A0A1W2PRG0 241 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 WDR46O15213 610 aaKnown RBP11.53□□□□□ -0.56
VRK3-224ENST00000601849 RAD21O60216 631 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 GUCY1A2P33402 732 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 COPB2P35606 906 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 ICA1Q05084 483 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 GJC2Q5T442 439 aaPredicted RBP11.53□□□□□ -0.56
VRK3-224ENST00000601849 FAM109BQ6ICB4 259 aaPredicted RBP11.53□□□□□ -0.56
VRK3-224ENST00000601849 SLC39A5Q6ZMH5 540 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 Q7L0L9 218 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 PANK1Q8TE04 598 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 VCPKMTQ9H867 229 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 KANSL2Q9H9L4 492 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 GOPCQ9HD26 462 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 CDK5RAP2Q96SN8 1893 aa11.53□□□□□ -0.56
VRK3-224ENST00000601849 RARBP10826 455 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 CYBAP13498 195 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 RTP1P59025 263 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 KCTD2Q14681 263 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 RNF180Q86T96 592 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 SPICE1Q8N0Z3 855 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 LCORLQ8N3X6 602 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 MMP19Q99542 508 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 BOLA2Q9H3K6 86 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 ARMT1Q9H993 441 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 PRDM5Q9NQX1 630 aaPredicted RBP11.52□□□□□ -0.57
VRK3-224ENST00000601849 NRBP1Q9UHY1 535 aa11.52□□□□□ -0.57
VRK3-224ENST00000601849 CTDP1Q9Y5B0 961 aaPredicted RBP11.52□□□□□ -0.57
VRK3-224ENST00000601849 TCRBV5S4A2TA0A5A2 114 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 MBD4O95243 580 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 ATP5JP18859 108 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 ADD2P35612 726 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 CDK8P49336 464 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 UBE3CQ15386 1083 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 ZNF697Q5TEC3 545 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 MKNK2Q9HBH9 465 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 ZNF287Q9HBT7 754 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 DIS3Q9Y2L1 958 aaKnown RBP11.51□□□□□ -0.57
VRK3-224ENST00000601849 TACC3Q9Y6A5 838 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 SLC4A4Q9Y6R1 1079 aa11.51□□□□□ -0.57
VRK3-224ENST00000601849 MYO5AQ9Y4I1 1855 aaKnown RBP11.51□□□□□ -0.57
VRK3-224ENST00000601849 ALPK3Q96L96 1907 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 USP17L12C9JPN9 530 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 USP17L21D6R901 530 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 COBLO75128 1261 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 AKR1B1P15121 316 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 STAT3P40763 770 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 ADCYAP1R1P41586 468 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 C12orf60Q5U649 245 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 TRPV1Q8NER1 839 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 DYNLL2Q96FJ2 89 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 MAML3Q96JK9 1138 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 HAUS7Q99871 368 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 XPNPEP3Q9NQH7 507 aa11.5□□□□□ -0.57
VRK3-224ENST00000601849 CNPY2Q9Y2B0 182 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms