RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 TMTC2Q8N394 836 aa13.51□□□□□ -0.25
ZNF548-211ENST00000600927 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
ZNF548-211ENST00000600927 ZNF280CQ8ND82 737 aa13.51□□□□□ -0.25
ZNF548-211ENST00000600927 ABHD8Q96I13 439 aa13.51□□□□□ -0.25
ZNF548-211ENST00000600927 EPB41L4AQ9HCS5 686 aaPredicted RBP13.51□□□□□ -0.25
ZNF548-211ENST00000600927 TPCN1Q9ULQ1 816 aa13.51□□□□□ -0.25
ZNF548-211ENST00000600927 TRIM75PA6NK02 468 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 PFKFB2O60825 505 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 CYP2D6P10635 497 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 LIFRP42702 1097 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 FGD1P98174 961 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 DGKZQ13574 1117 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 C12orf60Q5U649 245 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 C17orf99Q6UX52 265 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 MFSD6Q6ZSS7 791 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 TRIM34Q9BYJ4 488 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 AGTPBP1Q9UPW5 1226 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 SMC3Q9UQE7 1217 aa13.5□□□□□ -0.25
ZNF548-211ENST00000600927 BAZ2AQ9UIF9 1905 aaKnown RBP13.5□□□□□ -0.25
ZNF548-211ENST00000600927 SMIM22K7EJ46 135 aa13.49□□□□□ -0.25
ZNF548-211ENST00000600927 DHX16O60231 1041 aaKnown RBP13.49□□□□□ -0.25
ZNF548-211ENST00000600927 BRD1O95696 1058 aa13.49□□□□□ -0.25
ZNF548-211ENST00000600927 POLR3DP05423 398 aaPredicted RBP13.49□□□□□ -0.25
ZNF548-211ENST00000600927 SLC3A2P08195 630 aaKnown RBP13.49□□□□□ -0.25
ZNF548-211ENST00000600927 GUCY1A2P33402 732 aa13.49□□□□□ -0.25
ZNF548-211ENST00000600927 RCAN1P53805 252 aa13.49□□□□□ -0.25
ZNF548-211ENST00000600927 BACE1P56817 501 aa13.49□□□□□ -0.25
ZNF548-211ENST00000600927 SP3Q02447 781 aa13.49□□□□□ -0.25
ZNF548-211ENST00000600927 SPP2Q13103 211 aa13.49□□□□□ -0.25
ZNF548-211ENST00000600927 AS3MTQ9HBK9 375 aa13.49□□□□□ -0.25
ZNF548-211ENST00000600927 ARPP21Q9UBL0 812 aaPredicted RBP13.49□□□□□ -0.25
ZNF548-211ENST00000600927 SWAP70Q9UH65 585 aa13.49□□□□□ -0.25
ZNF548-211ENST00000600927 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
ZNF548-211ENST00000600927 GREB1LQ9C091 1923 aaPredicted RBP13.49□□□□□ -0.25
ZNF548-211ENST00000600927 DDX11L8A8MPP1 907 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 PRC1O43663 620 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 GH2P01242 217 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 BCRP11274 1271 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 MCM4P33991 863 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 HAND2P61296 217 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 HMGN5P82970 282 aaKnown RBP13.48□□□□□ -0.25
ZNF548-211ENST00000600927 PPARAQ07869 468 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 PPP2R5BQ15173 497 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 PKN2Q16513 984 aaKnown RBP13.48□□□□□ -0.25
ZNF548-211ENST00000600927 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
ZNF548-211ENST00000600927 TREML2Q5T2D2 321 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 CTR9Q6PD62 1173 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 C16orf86Q6ZW13 317 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 SGMS1Q86VZ5 419 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 SLC44A5Q8NCS7 719 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 TNPO1Q92973 898 aaKnown RBP13.48□□□□□ -0.25
ZNF548-211ENST00000600927 BRF1Q92994 677 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 GTF3C6Q969F1 213 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 ERO1AQ96HE7 468 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 PARK7Q99497 189 aaKnown RBP13.48□□□□□ -0.25
ZNF548-211ENST00000600927 NBPF3Q9H094 633 aa13.48□□□□□ -0.25
ZNF548-211ENST00000600927 CYP2D7A0A087X1C5 515 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 USP17L12C9JPN9 530 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 USP17L21D6R901 530 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 GOLGA6L22H0YM25 854 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 CYP2C8P10632 490 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 HMGCS2P54868 508 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 MTMR2Q13614 643 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 SART3Q15020 963 aaKnown RBP13.47□□□□□ -0.25
ZNF548-211ENST00000600927 ABCB5Q2M3G0 1257 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 GADL1Q6ZQY3 521 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 OTOP1Q7RTM1 612 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 AMOTL1Q8IY63 956 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 CD99L2Q8TCZ2 262 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 DYNLL2Q96FJ2 89 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 C12orf42Q96LP6 360 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 ATP6V1DQ9Y5K8 247 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 ZSWIM8A7E2V4 1837 aa13.47□□□□□ -0.25
ZNF548-211ENST00000600927 LAMA4Q16363 1823 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 C19orf81C9J6K1 198 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 USP17L10C9JJH3 530 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 ORC4O43929 436 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 LARGE1O95461 756 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 PDIA3P30101 505 aaKnown RBP13.46□□□□□ -0.25
ZNF548-211ENST00000600927 LACTBP83111 547 aaPredicted RBP13.46□□□□□ -0.25
ZNF548-211ENST00000600927 CCDC178Q5BJE1 867 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 FBXO46Q6PJ61 603 aaPredicted RBP13.46□□□□□ -0.25
ZNF548-211ENST00000600927 NOL8Q76FK4 1167 aaKnown RBP13.46□□□□□ -0.25
ZNF548-211ENST00000600927 TBC1D10CQ8IV04 446 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 SMARCC2Q8TAQ2 1214 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 IGDCC4Q8TDY8 1250 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 ESR2Q92731 530 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 ZNF287Q9HBT7 754 aa13.46□□□□□ -0.25
ZNF548-211ENST00000600927 SH2B2O14492 632 aaPredicted RBP13.45□□□□□ -0.26
ZNF548-211ENST00000600927 GJB2P29033 226 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 CTGFP29279 349 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 HOXA7P31268 230 aaPredicted RBP13.45□□□□□ -0.26
ZNF548-211ENST00000600927 CDK8P49336 464 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 ANTXR2P58335 489 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 PDE4BQ07343 736 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 SKOR2Q2VWA4 1001 aaPredicted RBP13.45□□□□□ -0.26
ZNF548-211ENST00000600927 TCEANC2Q96MN5 208 aa13.45□□□□□ -0.26
ZNF548-211ENST00000600927 KIAA1683Q9H0B3 1180 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms