RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 MOV10L1Q9BXT6 1211 aaKnown RBP12.18□□□□□ -0.46
HIF3A-219ENST00000600879 CDK5RAP2Q96SN8 1893 aa12.18□□□□□ -0.46
HIF3A-219ENST00000600879 PNMA6EA0A0J9YXQ4 647 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 GNAI3P08754 354 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 CLTBP09497 229 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 RAG1P15918 1043 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 CYP7A1P22680 504 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 ZAP70P43403 619 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 USP5P45974 858 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 USP14P54578 494 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 EVX2Q03828 476 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 ABCB5Q2M3G0 1257 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 CERKLQ49MI3 558 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-219ENST00000600879 ASB2Q96Q27 587 aa12.17□□□□□ -0.46
HIF3A-219ENST00000600879 UHRF1Q96T88 793 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-219ENST00000600879 FOCADQ5VW36 1801 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 SEPT4O43236 478 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 TAL1P17542 331 aaPredicted RBP12.16□□□□□ -0.46
HIF3A-219ENST00000600879 ERCC3P19447 782 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 FPGSQ05932 587 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 MTX1Q13505 466 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 ADGRE1Q14246 886 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 PLS1Q14651 629 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 TATDN1Q6P1N9 297 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 YTHDC1Q96MU7 727 aaKnown RBP12.16□□□□□ -0.46
HIF3A-219ENST00000600879 TANGO6Q9C0B7 1094 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 KIAA1683Q9H0B3 1180 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 SERPINB13Q9UIV8 391 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 TNNQ9UQP3 1299 aa12.16□□□□□ -0.46
HIF3A-219ENST00000600879 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.15□□□□□ -0.46
HIF3A-219ENST00000600879 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.15□□□□□ -0.46
HIF3A-219ENST00000600879 IDH1O75874 414 aaKnown RBP12.15□□□□□ -0.46
HIF3A-219ENST00000600879 IGFBP4P22692 258 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 GUCY1A2P33402 732 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
HIF3A-219ENST00000600879 SEPT2Q15019 361 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 TNNI3KQ59H18 835 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 CCDC158Q5M9N0 1113 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 OLFML2BQ68BL8 750 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 LBX2Q6XYB7 198 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 CCDC129Q6ZRS4 1044 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 NCAPG2Q86XI2 1143 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
HIF3A-219ENST00000600879 SPATC1LQ9H0A9 340 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 CABP5Q9NP86 173 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 XPNPEP3Q9NQH7 507 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 TMEM39AQ9NV64 488 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 THEGQ9P2T0 379 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 TACC3Q9Y6A5 838 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 FPGT-TNNI3KV9GXZ4 949 aa12.15□□□□□ -0.46
HIF3A-219ENST00000600879 MYO5AQ9Y4I1 1855 aaKnown RBP12.14□□□□□ -0.47
HIF3A-219ENST00000600879 A0A1W2PQ45 241 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-219ENST00000600879 A0A1W2PQY0 241 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 MPHOSPH10O00566 681 aaKnown RBP12.14□□□□□ -0.47
HIF3A-219ENST00000600879 KIAA0355O15063 1070 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 ACRP10323 421 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 SHMT1P34896 483 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 PLCD1P51178 756 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-219ENST00000600879 KIAA1755Q5JYT7 1200 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 C16orf59Q7L2K0 433 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 MICALL1Q8N3F8 863 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 MAGEB6Q8N7X4 407 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 ATXN2LQ8WWM7 1075 aaKnown RBP12.14□□□□□ -0.47
HIF3A-219ENST00000600879 PBX4Q9BYU1 374 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 TLR7Q9NYK1 1049 aaKnown RBP12.14□□□□□ -0.47
HIF3A-219ENST00000600879 PHF24Q9UPV7 400 aa12.14□□□□□ -0.47
HIF3A-219ENST00000600879 A0A1W2PRG0 241 aa12.13□□□□□ -0.47
HIF3A-219ENST00000600879 STRNO43815 780 aa12.13□□□□□ -0.47
HIF3A-219ENST00000600879 GNAI2P04899 355 aa12.13□□□□□ -0.47
HIF3A-219ENST00000600879 PGK2P07205 417 aa12.13□□□□□ -0.47
HIF3A-219ENST00000600879 MRPS5P82675 430 aaKnown RBP12.13□□□□□ -0.47
HIF3A-219ENST00000600879 TFF2Q03403 129 aa12.13□□□□□ -0.47
HIF3A-219ENST00000600879 FAAP100Q0VG06 881 aa12.13□□□□□ -0.47
HIF3A-219ENST00000600879 COG2Q14746 738 aa12.13□□□□□ -0.47
HIF3A-219ENST00000600879 CLEC10AQ8IUN9 316 aa12.13□□□□□ -0.47
HIF3A-219ENST00000600879 MAML3Q96JK9 1138 aa12.13□□□□□ -0.47
HIF3A-219ENST00000600879 GAS2L1Q99501 681 aaPredicted RBP12.13□□□□□ -0.47
HIF3A-219ENST00000600879 MYH1P12882 1939 aa12.13□□□□□ -0.47
HIF3A-219ENST00000600879 ZNF236Q9UL36 1845 aa12.12□□□□□ -0.47
HIF3A-219ENST00000600879 C1orf53Q5VUE5 145 aa12.12□□□□□ -0.47
HIF3A-219ENST00000600879 TTC6Q86TZ1 520 aa12.12□□□□□ -0.47
HIF3A-219ENST00000600879 SPICE1Q8N0Z3 855 aa12.12□□□□□ -0.47
HIF3A-219ENST00000600879 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
HIF3A-219ENST00000600879 ATG4CQ96DT6 458 aa12.12□□□□□ -0.47
HIF3A-219ENST00000600879 CCDC8Q9H0W5 538 aaPredicted RBP12.12□□□□□ -0.47
HIF3A-219ENST00000600879 EHD4Q9H223 541 aa12.12□□□□□ -0.47
HIF3A-219ENST00000600879 SLC5A4Q9NY91 659 aa12.12□□□□□ -0.47
HIF3A-219ENST00000600879 MYADML2A6NDP7 307 aa12.11□□□□□ -0.47
HIF3A-219ENST00000600879 POLR3DP05423 398 aaPredicted RBP12.11□□□□□ -0.47
HIF3A-219ENST00000600879 RARBP10826 455 aa12.11□□□□□ -0.47
HIF3A-219ENST00000600879 HOXD11P31277 338 aaPredicted RBP12.11□□□□□ -0.47
HIF3A-219ENST00000600879 KCNQ1P51787 676 aa12.11□□□□□ -0.47
HIF3A-219ENST00000600879 RARSP54136 660 aaKnown RBP12.11□□□□□ -0.47
HIF3A-219ENST00000600879 SLC44A5Q8NCS7 719 aa12.11□□□□□ -0.47
HIF3A-219ENST00000600879 SHCBP1Q8NEM2 672 aa12.11□□□□□ -0.47
HIF3A-219ENST00000600879 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
HIF3A-219ENST00000600879 PPP1R12CQ9BZL4 782 aa12.11□□□□□ -0.47
HIF3A-219ENST00000600879 NKX2-4Q9H2Z4 354 aa12.11□□□□□ -0.47
HIF3A-219ENST00000600879 ANTXR1Q9H6X2 564 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms