RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 USP17L24Q0WX57 530 aa10.48□□□□□ -0.73
SSBP4-208ENST00000600628 CENPQQ7L2Z9 268 aaPredicted RBP10.48□□□□□ -0.73
SSBP4-208ENST00000600628 NEDD1Q8NHV4 660 aa10.48□□□□□ -0.73
SSBP4-208ENST00000600628 SMCR8Q8TEV9 937 aaPredicted RBP10.48□□□□□ -0.73
SSBP4-208ENST00000600628 GTF3C2Q8WUA4 911 aaPredicted RBP10.48□□□□□ -0.73
SSBP4-208ENST00000600628 USP6NLQ92738 828 aa10.48□□□□□ -0.73
SSBP4-208ENST00000600628 NAPBQ9H115 298 aa10.48□□□□□ -0.73
SSBP4-208ENST00000600628 MTMR4Q9NYA4 1195 aa10.48□□□□□ -0.73
SSBP4-208ENST00000600628 TMOD4Q9NZQ9 345 aa10.48□□□□□ -0.73
SSBP4-208ENST00000600628 ZNF236Q9UL36 1845 aa10.48□□□□□ -0.73
SSBP4-208ENST00000600628 MYPNQ86TC9 1320 aa10.48□□□□□ -0.73
SSBP4-208ENST00000600628 SPDYE16A6NNV3 312 aaPredicted RBP10.47□□□□□ -0.73
SSBP4-208ENST00000600628 MINDY4BA8MYZ0 360 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 OSBPP22059 807 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 CHMLP26374 656 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 MLLT1Q03111 559 aaPredicted RBP10.47□□□□□ -0.73
SSBP4-208ENST00000600628 IRF5Q13568 498 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 Q3C1V9 767 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 ANKRD13CQ8N6S4 541 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 NKX2-3Q8TAU0 364 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 RILPL2Q969X0 211 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 ZNF333Q96JL9 665 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 DSCC1Q9BVC3 393 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 IL17RBQ9NRM6 502 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 RABGAP1Q9Y3P9 1069 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 PTCH2Q9Y6C5 1203 aa10.47□□□□□ -0.73
SSBP4-208ENST00000600628 ZNFX1Q9P2E3 1918 aaKnown RBP10.46□□□□□ -0.73
SSBP4-208ENST00000600628 PDE4DIPQ5VU43 2346 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 WDR46O15213 610 aaKnown RBP10.46□□□□□ -0.73
SSBP4-208ENST00000600628 PRDM1O75626 825 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 ECM2O94769 699 aaPredicted RBP10.46□□□□□ -0.73
SSBP4-208ENST00000600628 FMNL1O95466 1100 aaPredicted RBP10.46□□□□□ -0.73
SSBP4-208ENST00000600628 APPP05067 770 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 PCP11498 1178 aaKnown RBP10.46□□□□□ -0.73
SSBP4-208ENST00000600628 HOXD10P28358 340 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 MFAP1P55081 439 aaKnown RBP10.46□□□□□ -0.73
SSBP4-208ENST00000600628 FCGRTP55899 365 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 PDE4BQ07343 736 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 CEP95Q96GE4 821 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 RPAP3Q9H6T3 665 aaPredicted RBP10.46□□□□□ -0.73
SSBP4-208ENST00000600628 SH2D4AQ9H788 454 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 ZNF287Q9HBT7 754 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 ARHGEF10LQ9HCE6 1279 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 INCENPQ9NQS7 918 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 TCP11L1Q9NUJ3 509 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 RAD50Q92878 1312 aa10.46□□□□□ -0.73
SSBP4-208ENST00000600628 MPHOSPH10O00566 681 aaKnown RBP10.45□□□□□ -0.74
SSBP4-208ENST00000600628 PEX10O60683 326 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 NT5C2P49902 561 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 ERVK-9P63128 1117 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 ERVK-24P63145 666 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 IRX3P78415 501 aaPredicted RBP10.45□□□□□ -0.74
SSBP4-208ENST00000600628 CTDSPL2Q05D32 466 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 COG2Q14746 738 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 ZYXQ15942 572 aaKnown RBP10.45□□□□□ -0.74
SSBP4-208ENST00000600628 CWC27Q6UX04 472 aaKnown RBP10.45□□□□□ -0.74
SSBP4-208ENST00000600628 NBPF11Q86T75 865 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 GMCL1P1Q8NEA9 526 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 REPS2Q8NFH8 660 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 STAG1Q8WVM7 1258 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 FEZ1Q99689 392 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 PORCNQ9H237 461 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 MKNK2Q9HBH9 465 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 BTBD7Q9P203 1132 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 GABRQQ9UN88 632 aa10.45□□□□□ -0.74
SSBP4-208ENST00000600628 SGSM2O43147 1006 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 TTLL1O95922 423 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 DSG3P32926 999 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 PRKCZQ05513 592 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 SLC9C1Q4G0N8 1177 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 BMP2KLQ5H9B9 411 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 MORN1Q5T089 497 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 RCSD1Q6JBY9 416 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.44□□□□□ -0.74
SSBP4-208ENST00000600628 TBC1D10CQ8IV04 446 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 ZNF444Q8N0Y2 327 aaPredicted RBP10.44□□□□□ -0.74
SSBP4-208ENST00000600628 MB21D1Q8N884 522 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 GPRC5AQ8NFJ5 357 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 PXYLP1Q8TE99 480 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 HOXC10Q9NYD6 342 aa10.44□□□□□ -0.74
SSBP4-208ENST00000600628 RANBP2P49792 3224 aaKnown RBP10.44□□□□□ -0.74
SSBP4-208ENST00000600628 SMCHD1A6NHR9 2005 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 F5H6K3 240 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 ATP2A1O14983 1001 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 PLA2G6O60733 806 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 NDUFB10O96000 172 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 SLC3A2P08195 630 aaKnown RBP10.43□□□□□ -0.74
SSBP4-208ENST00000600628 HOXC6P09630 235 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 XRCC5P13010 732 aaKnown RBP10.43□□□□□ -0.74
SSBP4-208ENST00000600628 FLT3LGP49771 235 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 TFAP4Q01664 338 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 KLRC3Q07444 240 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 FAM47AQ5JRC9 791 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 AKNAD1Q5T1N1 836 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 ERICH6BQ5W0A0 696 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 RAET1EQ8TD07 263 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 GOPCQ9HD26 462 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 DIAPH3Q9NSV4 1193 aa10.43□□□□□ -0.74
SSBP4-208ENST00000600628 NEDD4P46934 1319 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 POTEFA5A3E0 1075 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms