RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 WDR46O15213 610 aaKnown RBP15.34■□□□□ 0.05
SRRM1-223ENST00000600523 CYP2C8P10632 490 aa15.34■□□□□ 0.05
SRRM1-223ENST00000600523 VCAM1P19320 739 aa15.34■□□□□ 0.05
SRRM1-223ENST00000600523 PTH1RQ03431 593 aa15.34■□□□□ 0.05
SRRM1-223ENST00000600523 TBC1D10CQ8IV04 446 aa15.34■□□□□ 0.05
SRRM1-223ENST00000600523 CCAR1Q8IX12 1150 aaKnown RBP15.34■□□□□ 0.05
SRRM1-223ENST00000600523 ZNF296Q8WUU4 475 aaPredicted RBP15.34■□□□□ 0.05
SRRM1-223ENST00000600523 UBAC1Q9BSL1 405 aa15.34■□□□□ 0.05
SRRM1-223ENST00000600523 ASCC2Q9H1I8 757 aaPredicted RBP15.34■□□□□ 0.05
SRRM1-223ENST00000600523 IL25Q9H293 177 aa15.34■□□□□ 0.05
SRRM1-223ENST00000600523 RPAP3Q9H6T3 665 aaPredicted RBP15.34■□□□□ 0.05
SRRM1-223ENST00000600523 ISY1Q9ULR0 285 aaKnown RBP15.34■□□□□ 0.05
SRRM1-223ENST00000600523 RBM8AQ9Y5S9 174 aaKnown RBP15.34■□□□□ 0.05
SRRM1-223ENST00000600523 A0A1W2PRG0 241 aa15.33■□□□□ 0.04
SRRM1-223ENST00000600523 SART3Q15020 963 aaKnown RBP15.33■□□□□ 0.04
SRRM1-223ENST00000600523 CLEC10AQ8IUN9 316 aa15.33■□□□□ 0.04
SRRM1-223ENST00000600523 MKL1Q969V6 931 aa15.33■□□□□ 0.04
SRRM1-223ENST00000600523 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.33■□□□□ 0.04
SRRM1-223ENST00000600523 TCP11L1Q9NUJ3 509 aa15.33■□□□□ 0.04
SRRM1-223ENST00000600523 HOXC10Q9NYD6 342 aa15.33■□□□□ 0.04
SRRM1-223ENST00000600523 CPA4Q9UI42 421 aa15.33■□□□□ 0.04
SRRM1-223ENST00000600523 LOC285556D6RIA3 1793 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 ERICH2A1L162 156 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 F5H6K3 240 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 KDM4AO75164 1064 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 ZKSCAN1P17029 563 aaPredicted RBP15.32■□□□□ 0.04
SRRM1-223ENST00000600523 KLRC3Q07444 240 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 DGKZQ13574 1117 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 COG2Q14746 738 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 SPICE1Q8N0Z3 855 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 NCOA7Q8NI08 942 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 TTC14Q96N46 770 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 LSG1Q9H089 658 aaKnown RBP15.32■□□□□ 0.04
SRRM1-223ENST00000600523 INCENPQ9NQS7 918 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 PTPRFP10586 1907 aa15.32■□□□□ 0.04
SRRM1-223ENST00000600523 B4E1Z4 1266 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 FLOT1O75955 427 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 GNRH1P01148 92 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 TOP1P11387 765 aaKnown RBP15.31■□□□□ 0.04
SRRM1-223ENST00000600523 HERVK_113P62684 666 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 C17orf99Q6UX52 265 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 CATSPERGQ6ZRH7 1159 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 SIAH1Q8IUQ4 282 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 GMCL1P1Q8NEA9 526 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 R3HDMLQ9H3Y0 253 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 CWC22Q9HCG8 908 aaKnown RBP15.31■□□□□ 0.04
SRRM1-223ENST00000600523 CTDP1Q9Y5B0 961 aaPredicted RBP15.31■□□□□ 0.04
SRRM1-223ENST00000600523 NEDD4P46934 1319 aa15.31■□□□□ 0.04
SRRM1-223ENST00000600523 CYP21A2P08686 494 aa15.3■□□□□ 0.04
SRRM1-223ENST00000600523 HOXD10P28358 340 aa15.3■□□□□ 0.04
SRRM1-223ENST00000600523 FCGRTP55899 365 aa15.3■□□□□ 0.04
SRRM1-223ENST00000600523 CCNA1P78396 465 aa15.3■□□□□ 0.04
SRRM1-223ENST00000600523 LAMA4Q16363 1823 aa15.3■□□□□ 0.04
SRRM1-223ENST00000600523 PKN2Q16513 984 aaKnown RBP15.3■□□□□ 0.04
SRRM1-223ENST00000600523 FAM110CQ1W6H9 321 aa15.3■□□□□ 0.04
SRRM1-223ENST00000600523 CTU1Q7Z7A3 348 aaKnown RBP15.3■□□□□ 0.04
SRRM1-223ENST00000600523 DGKHQ86XP1 1220 aa15.3■□□□□ 0.04
SRRM1-223ENST00000600523 LRRC47Q8N1G4 583 aaKnown RBP15.3■□□□□ 0.04
SRRM1-223ENST00000600523 ANKRD13CQ8N6S4 541 aa15.3■□□□□ 0.04
SRRM1-223ENST00000600523 MB21D1Q8N884 522 aa15.3■□□□□ 0.04
SRRM1-223ENST00000600523 ZSCAN10Q96SZ4 725 aaPredicted RBP15.3■□□□□ 0.04
SRRM1-223ENST00000600523 P2RX7Q99572 595 aaKnown RBP15.3■□□□□ 0.04
SRRM1-223ENST00000600523 MYPNQ86TC9 1320 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 E7EWF7 191 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 EPB41L2O43491 1005 aaKnown RBP15.29■□□□□ 0.04
SRRM1-223ENST00000600523 NMT2O60551 498 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 FMNL1O95466 1100 aaPredicted RBP15.29■□□□□ 0.04
SRRM1-223ENST00000600523 NDUFB10O96000 172 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 MCCP23508 829 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 SLC1A4P43007 532 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 LACTBP83111 547 aaPredicted RBP15.29■□□□□ 0.04
SRRM1-223ENST00000600523 IKQ13123 557 aaPredicted RBP15.29■□□□□ 0.04
SRRM1-223ENST00000600523 KRT32Q14532 448 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 CREB3L3Q68CJ9 461 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 SLFN13Q68D06 897 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
SRRM1-223ENST00000600523 GPRC5AQ8NFJ5 357 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 PAGR1Q9BTK6 254 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 KAT14Q9H8E8 782 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 EFCC1Q9HA90 598 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 IL17RBQ9NRM6 502 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 ZSWIM5Q9P217 1185 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 PCNTO95613 3336 aa15.29■□□□□ 0.04
SRRM1-223ENST00000600523 ADGRA2Q96PE1 1338 aa15.28■□□□□ 0.04
SRRM1-223ENST00000600523 SLC27A2O14975 620 aa15.28■□□□□ 0.04
SRRM1-223ENST00000600523 BCRP11274 1271 aa15.28■□□□□ 0.04
SRRM1-223ENST00000600523 BMP3P12645 472 aa15.28■□□□□ 0.04
SRRM1-223ENST00000600523 FAM83BQ5T0W9 1011 aa15.28■□□□□ 0.04
SRRM1-223ENST00000600523 CD99L2Q8TCZ2 262 aa15.28■□□□□ 0.04
SRRM1-223ENST00000600523 CHURC1Q8WUH1 139 aa15.28■□□□□ 0.04
SRRM1-223ENST00000600523 FEM1BQ9UK73 627 aa15.28■□□□□ 0.04
SRRM1-223ENST00000600523 RABGAP1Q9Y3P9 1069 aa15.28■□□□□ 0.04
SRRM1-223ENST00000600523 TRIM17Q9Y577 477 aa15.28■□□□□ 0.04
SRRM1-223ENST00000600523 GREB1LQ9C091 1923 aaPredicted RBP15.27■□□□□ 0.04
SRRM1-223ENST00000600523 MCM5P33992 734 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 PRMT2P55345 433 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 NECTIN1Q15223 517 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 CCDC96Q2M329 555 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms