RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 USP17L19D6RCP7 530 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 USP17L20D6RJB6 530 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 FKTNO75072 461 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 CYP2C8P10632 490 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 GCLCP48506 637 aaPredicted RBP16.32■□□□□ 0.2
SNRPA-208ENST00000600456 IRX3P78415 501 aaPredicted RBP16.32■□□□□ 0.2
SNRPA-208ENST00000600456 USP17L24Q0WX57 530 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 C17orf99Q6UX52 265 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 GTF3C2Q8WUA4 911 aaPredicted RBP16.32■□□□□ 0.2
SNRPA-208ENST00000600456 ZNF296Q8WUU4 475 aaPredicted RBP16.32■□□□□ 0.2
SNRPA-208ENST00000600456 ASCC2Q9H1I8 757 aaPredicted RBP16.32■□□□□ 0.2
SNRPA-208ENST00000600456 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 CLIP2Q9UDT6 1046 aa16.32■□□□□ 0.2
SNRPA-208ENST00000600456 RBM8AQ9Y5S9 174 aaKnown RBP16.32■□□□□ 0.2
SNRPA-208ENST00000600456 NEDD4P46934 1319 aa16.31■□□□□ 0.2
SNRPA-208ENST00000600456 CYP21A2P08686 494 aa16.31■□□□□ 0.2
SNRPA-208ENST00000600456 NOVP48745 357 aa16.31■□□□□ 0.2
SNRPA-208ENST00000600456 SP3Q02447 781 aa16.31■□□□□ 0.2
SNRPA-208ENST00000600456 WDR46O15213 610 aaKnown RBP16.3■□□□□ 0.2
SNRPA-208ENST00000600456 TRDNQ13061 729 aa16.3■□□□□ 0.2
SNRPA-208ENST00000600456 CCDC178Q5BJE1 867 aa16.3■□□□□ 0.2
SNRPA-208ENST00000600456 CATSPERGQ6ZRH7 1159 aa16.3■□□□□ 0.2
SNRPA-208ENST00000600456 GMCL1P1Q8NEA9 526 aa16.3■□□□□ 0.2
SNRPA-208ENST00000600456 ERO1AQ96HE7 468 aa16.3■□□□□ 0.2
SNRPA-208ENST00000600456 RPAP3Q9H6T3 665 aaPredicted RBP16.3■□□□□ 0.2
SNRPA-208ENST00000600456 IL17RBQ9NRM6 502 aa16.3■□□□□ 0.2
SNRPA-208ENST00000600456 STX8Q9UNK0 236 aa16.3■□□□□ 0.2
SNRPA-208ENST00000600456 F5H6K3 240 aa16.29■□□□□ 0.2
SNRPA-208ENST00000600456 KDM4AO75164 1064 aa16.29■□□□□ 0.2
SNRPA-208ENST00000600456 BCRP11274 1271 aa16.29■□□□□ 0.2
SNRPA-208ENST00000600456 HERVK_113P62684 666 aa16.29■□□□□ 0.2
SNRPA-208ENST00000600456 KLRC3Q07444 240 aa16.29■□□□□ 0.2
SNRPA-208ENST00000600456 ARHGEF6Q15052 776 aa16.29■□□□□ 0.2
SNRPA-208ENST00000600456 KIAA1755Q5JYT7 1200 aa16.29■□□□□ 0.2
SNRPA-208ENST00000600456 IQCA1Q86XH1 822 aa16.29■□□□□ 0.2
SNRPA-208ENST00000600456 TTC14Q96N46 770 aa16.29■□□□□ 0.2
SNRPA-208ENST00000600456 CPA4Q9UI42 421 aa16.29■□□□□ 0.2
SNRPA-208ENST00000600456 EPB41L2O43491 1005 aaKnown RBP16.28■□□□□ 0.2
SNRPA-208ENST00000600456 NMT2O60551 498 aa16.28■□□□□ 0.2
SNRPA-208ENST00000600456 REC8O95072 547 aa16.28■□□□□ 0.2
SNRPA-208ENST00000600456 NECTIN1Q15223 517 aa16.28■□□□□ 0.2
SNRPA-208ENST00000600456 FAM110CQ1W6H9 321 aa16.28■□□□□ 0.2
SNRPA-208ENST00000600456 RNF20Q5VTR2 975 aa16.28■□□□□ 0.2
SNRPA-208ENST00000600456 LBX2Q6XYB7 198 aa16.28■□□□□ 0.2
SNRPA-208ENST00000600456 SPICE1Q8N0Z3 855 aa16.28■□□□□ 0.2
SNRPA-208ENST00000600456 LRRC47Q8N1G4 583 aaKnown RBP16.28■□□□□ 0.2
SNRPA-208ENST00000600456 P2RX7Q99572 595 aaKnown RBP16.28■□□□□ 0.2
SNRPA-208ENST00000600456 TANGO6Q9C0B7 1094 aa16.28■□□□□ 0.2
SNRPA-208ENST00000600456 MYPNQ86TC9 1320 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 B4E1Z4 1266 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 E7EWF7 191 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 SLC27A2O14975 620 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 NDUFB10O96000 172 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 TOP1P11387 765 aaKnown RBP16.27■□□□□ 0.2
SNRPA-208ENST00000600456 LACTBP83111 547 aaPredicted RBP16.27■□□□□ 0.2
SNRPA-208ENST00000600456 COG2Q14746 738 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 KIF22Q14807 665 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 CTU1Q7Z7A3 348 aaKnown RBP16.27■□□□□ 0.2
SNRPA-208ENST00000600456 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.2
SNRPA-208ENST00000600456 DGKHQ86XP1 1220 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 NCOA7Q8NI08 942 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 HOXC10Q9NYD6 342 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 ZSWIM5Q9P217 1185 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 MORF4L1Q9UBU8 362 aa16.27■□□□□ 0.2
SNRPA-208ENST00000600456 RAD21O60216 631 aa16.26■□□□□ 0.19
SNRPA-208ENST00000600456 SLFN13Q68D06 897 aa16.26■□□□□ 0.19
SNRPA-208ENST00000600456 ZSCAN10Q96SZ4 725 aaPredicted RBP16.26■□□□□ 0.19
SNRPA-208ENST00000600456 UBAC1Q9BSL1 405 aa16.26■□□□□ 0.19
SNRPA-208ENST00000600456 SPDYE16A6NNV3 312 aaPredicted RBP16.25■□□□□ 0.19
SNRPA-208ENST00000600456 EIF5BO60841 1220 aaKnown RBP16.25■□□□□ 0.19
SNRPA-208ENST00000600456 FLOT1O75955 427 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 GNRH1P01148 92 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 FAM83BQ5T0W9 1011 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 RCSD1Q6JBY9 416 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 ANKRD13CQ8N6S4 541 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 MB21D1Q8N884 522 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 CD99L2Q8TCZ2 262 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 ANKS1AQ92625 1134 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 TMEM47Q9BQJ4 181 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 RABGAP1Q9Y3P9 1069 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 TAF6LQ9Y6J9 622 aa16.25■□□□□ 0.19
SNRPA-208ENST00000600456 BMP3P12645 472 aa16.24■□□□□ 0.19
SNRPA-208ENST00000600456 ZKSCAN1P17029 563 aaPredicted RBP16.24■□□□□ 0.19
SNRPA-208ENST00000600456 DSG3P32926 999 aa16.24■□□□□ 0.19
SNRPA-208ENST00000600456 PKN2Q16513 984 aaKnown RBP16.24■□□□□ 0.19
SNRPA-208ENST00000600456 COL13A1Q5TAT6 717 aaPredicted RBP16.24■□□□□ 0.19
SNRPA-208ENST00000600456 STOX1Q6ZVD7 989 aa16.24■□□□□ 0.19
SNRPA-208ENST00000600456 GPRC5AQ8NFJ5 357 aa16.24■□□□□ 0.19
SNRPA-208ENST00000600456 RBPJLQ9UBG7 517 aa16.24■□□□□ 0.19
SNRPA-208ENST00000600456 TNKSO95271 1327 aa16.23■□□□□ 0.19
SNRPA-208ENST00000600456 SLC1A4P43007 532 aa16.23■□□□□ 0.19
SNRPA-208ENST00000600456 FCGRTP55899 365 aa16.23■□□□□ 0.19
SNRPA-208ENST00000600456 KRT32Q14532 448 aa16.23■□□□□ 0.19
SNRPA-208ENST00000600456 SART3Q15020 963 aaKnown RBP16.23■□□□□ 0.19
SNRPA-208ENST00000600456 TSGA10IPQ3SY00 556 aa16.23■□□□□ 0.19
SNRPA-208ENST00000600456 ENAHQ8N8S7 591 aaPredicted RBP16.23■□□□□ 0.19
SNRPA-208ENST00000600456 DCAF4Q8WV16 495 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms