RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 A0A0G2JMZ2 1700 aa22.52■■□□□ 1.2
PNKP-213ENST00000599543 A0A1W2PRG0 241 aa22.52■■□□□ 1.2
PNKP-213ENST00000599543 ARHGEF10LQ9HCE6 1279 aa22.52■■□□□ 1.2
PNKP-213ENST00000599543 IVNS1ABPQ9Y6Y0 642 aa22.52■■□□□ 1.2
PNKP-213ENST00000599543 RLFQ13129 1914 aa22.52■■□□□ 1.2
PNKP-213ENST00000599543 USP17L12C9JPN9 530 aa22.51■■□□□ 1.19
PNKP-213ENST00000599543 USP17L21D6R901 530 aa22.51■■□□□ 1.19
PNKP-213ENST00000599543 ICA1Q05084 483 aa22.51■■□□□ 1.19
PNKP-213ENST00000599543 MAP2K5Q13163 448 aa22.51■■□□□ 1.19
PNKP-213ENST00000599543 CCL14Q16627 93 aa22.51■■□□□ 1.19
PNKP-213ENST00000599543 C12orf60Q5U649 245 aa22.51■■□□□ 1.19
PNKP-213ENST00000599543 PUS7LQ9H0K6 701 aaKnown RBP22.51■■□□□ 1.19
PNKP-213ENST00000599543 DCTPP1Q9H773 170 aa22.51■■□□□ 1.19
PNKP-213ENST00000599543 SH2D4AQ9H788 454 aa22.51■■□□□ 1.19
PNKP-213ENST00000599543 BTBD7Q9P203 1132 aa22.51■■□□□ 1.19
PNKP-213ENST00000599543 PARP14Q460N5 1801 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 FRMPD3Q5JV73 1810 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 CYP2D7A0A087X1C5 515 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 AKR1B1P15121 316 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 CDK8P49336 464 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 CACNB2Q08289 660 aaPredicted RBP22.5■■□□□ 1.19
PNKP-213ENST00000599543 COG2Q14746 738 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 LPAR1Q92633 364 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 CCDC17Q96LX7 622 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 NBPF3Q9H094 633 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 HOXC10Q9NYD6 342 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 LAMA3Q16787 3333 aa22.5■■□□□ 1.19
PNKP-213ENST00000599543 SLC15A5A6NIM6 579 aa22.49■■□□□ 1.19
PNKP-213ENST00000599543 C16orf86Q6ZW13 317 aa22.49■■□□□ 1.19
PNKP-213ENST00000599543 CLEC10AQ8IUN9 316 aa22.49■■□□□ 1.19
PNKP-213ENST00000599543 RBM27Q9P2N5 1060 aaKnown RBP22.49■■□□□ 1.19
PNKP-213ENST00000599543 OGDHLQ9ULD0 1010 aa22.49■■□□□ 1.19
PNKP-213ENST00000599543 ZNF236Q9UL36 1845 aa22.48■■□□□ 1.19
PNKP-213ENST00000599543 PTPREP23469 700 aa22.48■■□□□ 1.19
PNKP-213ENST00000599543 ARPP21Q9UBL0 812 aaPredicted RBP22.48■■□□□ 1.19
PNKP-213ENST00000599543 TMX2Q9Y320 296 aa22.48■■□□□ 1.19
PNKP-213ENST00000599543 SMIM22K7EJ46 135 aa22.47■■□□□ 1.19
PNKP-213ENST00000599543 CCND3P30281 292 aaPredicted RBP22.47■■□□□ 1.19
PNKP-213ENST00000599543 GRB14Q14449 540 aa22.47■■□□□ 1.19
PNKP-213ENST00000599543 MFSD14CQ5VZR4 134 aa22.47■■□□□ 1.19
PNKP-213ENST00000599543 TSHZ3Q63HK5 1081 aa22.47■■□□□ 1.19
PNKP-213ENST00000599543 CTR9Q6PD62 1173 aa22.47■■□□□ 1.19
PNKP-213ENST00000599543 SPICE1Q8N0Z3 855 aa22.47■■□□□ 1.19
PNKP-213ENST00000599543 KBTBD3Q8NAB2 608 aa22.47■■□□□ 1.19
PNKP-213ENST00000599543 C11orf49Q9H6J7 331 aa22.47■■□□□ 1.19
PNKP-213ENST00000599543 COL11A1P12107 1806 aaPredicted RBP22.46■■□□□ 1.19
PNKP-213ENST00000599543 FLOT1O75955 427 aa22.46■■□□□ 1.19
PNKP-213ENST00000599543 KIAA1755Q5JYT7 1200 aa22.46■■□□□ 1.19
PNKP-213ENST00000599543 MB21D1Q8N884 522 aa22.46■■□□□ 1.19
PNKP-213ENST00000599543 VCPKMTQ9H867 229 aa22.46■■□□□ 1.19
PNKP-213ENST00000599543 MNX1P50219 401 aaPredicted RBP22.45■■□□□ 1.18
PNKP-213ENST00000599543 ATP2B2Q01814 1243 aa22.45■■□□□ 1.18
PNKP-213ENST00000599543 SIAH1Q8IUQ4 282 aa22.45■■□□□ 1.18
PNKP-213ENST00000599543 STRBPQ96SI9 672 aaKnown RBP22.45■■□□□ 1.18
PNKP-213ENST00000599543 MOV10L1Q9BXT6 1211 aaKnown RBP22.45■■□□□ 1.18
PNKP-213ENST00000599543 SPATC1LQ9H0A9 340 aa22.45■■□□□ 1.18
PNKP-213ENST00000599543 KANSL2Q9H9L4 492 aa22.45■■□□□ 1.18
PNKP-213ENST00000599543 GREB1LQ9C091 1923 aaPredicted RBP22.45■■□□□ 1.18
PNKP-213ENST00000599543 WDR46O15213 610 aaKnown RBP22.44■■□□□ 1.18
PNKP-213ENST00000599543 HOXC6P09630 235 aa22.44■■□□□ 1.18
PNKP-213ENST00000599543 DSG3P32926 999 aa22.44■■□□□ 1.18
PNKP-213ENST00000599543 PLS1Q14651 629 aa22.44■■□□□ 1.18
PNKP-213ENST00000599543 C7orf61Q8IZ16 206 aa22.44■■□□□ 1.18
PNKP-213ENST00000599543 APPBP2Q92624 585 aa22.44■■□□□ 1.18
PNKP-213ENST00000599543 FLRT1Q9NZU1 646 aa22.44■■□□□ 1.18
PNKP-213ENST00000599543 RNF113AO15541 343 aaKnown RBP22.43■■□□□ 1.18
PNKP-213ENST00000599543 ZFYP08048 801 aaPredicted RBP22.43■■□□□ 1.18
PNKP-213ENST00000599543 EEF2P13639 858 aaKnown RBP22.43■■□□□ 1.18
PNKP-213ENST00000599543 SAMD1Q6SPF0 538 aaPredicted RBP22.43■■□□□ 1.18
PNKP-213ENST00000599543 DPP9Q86TI2 863 aa22.43■■□□□ 1.18
PNKP-213ENST00000599543 PRO3102Q9H379 93 aa22.43■■□□□ 1.18
PNKP-213ENST00000599543 GOPCQ9HD26 462 aa22.43■■□□□ 1.18
PNKP-213ENST00000599543 DNAH12Q6ZR08 3092 aa22.43■■□□□ 1.18
PNKP-213ENST00000599543 STRNO43815 780 aa22.42■■□□□ 1.18
PNKP-213ENST00000599543 ERCC3P19447 782 aa22.42■■□□□ 1.18
PNKP-213ENST00000599543 ADORA2AP29274 412 aa22.42■■□□□ 1.18
PNKP-213ENST00000599543 LRRFIP1Q32MZ4 808 aaKnown RBP22.42■■□□□ 1.18
PNKP-213ENST00000599543 LHX8Q68G74 356 aa22.42■■□□□ 1.18
PNKP-213ENST00000599543 GIMAP6Q6P9H5 292 aa22.42■■□□□ 1.18
PNKP-213ENST00000599543 SHCBP1Q8NEM2 672 aa22.42■■□□□ 1.18
PNKP-213ENST00000599543 OSBP2Q969R2 916 aa22.42■■□□□ 1.18
PNKP-213ENST00000599543 ATG4CQ96DT6 458 aa22.42■■□□□ 1.18
PNKP-213ENST00000599543 ZNFX1Q9P2E3 1918 aaKnown RBP22.41■■□□□ 1.18
PNKP-213ENST00000599543 MYH4Q9Y623 1939 aa22.41■■□□□ 1.18
PNKP-213ENST00000599543 TTC41PQ6P2S7 1318 aa22.41■■□□□ 1.18
PNKP-213ENST00000599543 GSG1L2A8MUP6 293 aa22.41■■□□□ 1.18
PNKP-213ENST00000599543 ERC2O15083 957 aa22.41■■□□□ 1.18
PNKP-213ENST00000599543 RAD21O60216 631 aa22.41■■□□□ 1.18
PNKP-213ENST00000599543 SBK1Q52WX2 424 aa22.41■■□□□ 1.18
PNKP-213ENST00000599543 NCAPG2Q86XI2 1143 aa22.41■■□□□ 1.18
PNKP-213ENST00000599543 NPLOC4Q8TAT6 608 aa22.41■■□□□ 1.18
PNKP-213ENST00000599543 MROH8Q9H579 483 aa22.41■■□□□ 1.18
PNKP-213ENST00000599543 ROBO3Q96MS0 1386 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 PFASO15067 1338 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 MINDY4BA8MYZ0 360 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 GPAA1O43292 621 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 MSCO60682 206 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 GNAT2P19087 354 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 CNGA1P29973 690 aa22.4■■□□□ 1.18
PNKP-213ENST00000599543 CYP2C19P33261 490 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms