RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 COL11A2P13942 1736 aaPredicted RBP12.87□□□□□ -0.35
SMG9-207ENST00000598860 SH3TC1Q8TE82 1336 aa12.87□□□□□ -0.35
SMG9-207ENST00000598860 ABCC12Q96J65 1359 aa12.86□□□□□ -0.35
SMG9-207ENST00000598860 GNAI2P04899 355 aa12.86□□□□□ -0.35
SMG9-207ENST00000598860 HOXA10P31260 410 aaPredicted RBP12.86□□□□□ -0.35
SMG9-207ENST00000598860 C11orf91Q3C1V1 193 aa12.86□□□□□ -0.35
SMG9-207ENST00000598860 KIAA1522Q9P206 1035 aaPredicted RBP12.86□□□□□ -0.35
SMG9-207ENST00000598860 UTRNP46939 3433 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 ATXN7O15265 892 aaPredicted RBP12.85□□□□□ -0.35
SMG9-207ENST00000598860 C1QTNF8P60827 252 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 UBE3BQ7Z3V4 1068 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 ZNF280CQ8ND82 737 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 RBM17Q96I25 401 aaKnown RBP12.85□□□□□ -0.35
SMG9-207ENST00000598860 SUSD3Q96L08 255 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 CITED4Q96RK1 184 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 CRAMP1Q96RY5 1269 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 PLA2G12BQ9BX93 195 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 TAOK3Q9H2K8 898 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 KLK14Q9P0G3 267 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 PCDHGC4Q9Y5F7 938 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 LTBP3Q9NS15 1303 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 CACNA1SQ13698 1873 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 CCDC88AQ3V6T2 1871 aa12.85□□□□□ -0.35
SMG9-207ENST00000598860 NBPF7P0C2Y1 421 aaPredicted RBP12.84□□□□□ -0.35
SMG9-207ENST00000598860 HCLS1P14317 486 aaPredicted RBP12.84□□□□□ -0.35
SMG9-207ENST00000598860 PRELPP51888 382 aa12.84□□□□□ -0.35
SMG9-207ENST00000598860 CASP7P55210 303 aa12.84□□□□□ -0.35
SMG9-207ENST00000598860 TAGLNQ01995 201 aaKnown RBP12.84□□□□□ -0.35
SMG9-207ENST00000598860 ATCAYQ86WG3 371 aa12.84□□□□□ -0.35
SMG9-207ENST00000598860 ETFBKMTQ8IXQ9 262 aa12.84□□□□□ -0.35
SMG9-207ENST00000598860 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
SMG9-207ENST00000598860 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
SMG9-207ENST00000598860 ANKIB1Q9P2G1 1089 aa12.84□□□□□ -0.35
SMG9-207ENST00000598860 KDM2BQ8NHM5 1336 aa12.84□□□□□ -0.35
SMG9-207ENST00000598860 SPEF2Q9C093 1822 aa12.83□□□□□ -0.35
SMG9-207ENST00000598860 DCDC2BA2VCK2 349 aa12.83□□□□□ -0.36
SMG9-207ENST00000598860 BNIP3LO60238 219 aa12.83□□□□□ -0.36
SMG9-207ENST00000598860 GAS6Q14393 721 aa12.83□□□□□ -0.36
SMG9-207ENST00000598860 EAPPQ56P03 285 aaPredicted RBP12.83□□□□□ -0.36
SMG9-207ENST00000598860 RNFT1Q5M7Z0 435 aa12.83□□□□□ -0.36
SMG9-207ENST00000598860 RPAP2Q8IXW5 612 aaPredicted RBP12.83□□□□□ -0.36
SMG9-207ENST00000598860 ABHD17AQ96GS6 310 aa12.83□□□□□ -0.36
SMG9-207ENST00000598860 CNTNAP3BQ96NU0 1288 aa12.83□□□□□ -0.36
SMG9-207ENST00000598860 CFHR5Q9BXR6 569 aa12.83□□□□□ -0.36
SMG9-207ENST00000598860 CNTNAP3Q9BZ76 1288 aa12.83□□□□□ -0.36
SMG9-207ENST00000598860 PHF24Q9UPV7 400 aa12.83□□□□□ -0.36
SMG9-207ENST00000598860 TNRC6CQ9HCJ0 1690 aaKnown RBP12.83□□□□□ -0.36
SMG9-207ENST00000598860 FER1L6Q2WGJ9 1857 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 IRS4O14654 1257 aaPredicted RBP12.82□□□□□ -0.36
SMG9-207ENST00000598860 TREHO43280 583 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 PDE8AO60658 829 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 HMMRO75330 724 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 KRT76Q01546 638 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 MTX1Q13505 466 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 HIF1AQ16665 826 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 FAM89AQ96GI7 184 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 SUCLG2Q96I99 432 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 TMX4Q9H1E5 349 aaPredicted RBP12.82□□□□□ -0.36
SMG9-207ENST00000598860 NMRK2Q9NPI5 230 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 NDFIP2Q9NV92 336 aa12.82□□□□□ -0.36
SMG9-207ENST00000598860 LRRFIP2Q9Y608 721 aaKnown RBP12.82□□□□□ -0.36
SMG9-207ENST00000598860 GLTPD2A6NH11 291 aa12.81□□□□□ -0.36
SMG9-207ENST00000598860 KHNYNO15037 678 aaKnown RBP12.81□□□□□ -0.36
SMG9-207ENST00000598860 P4HBP07237 508 aaKnown RBP12.81□□□□□ -0.36
SMG9-207ENST00000598860 RABL6Q3YEC7 729 aaPredicted RBP12.81□□□□□ -0.36
SMG9-207ENST00000598860 SAMD5Q5TGI4 173 aa12.81□□□□□ -0.36
SMG9-207ENST00000598860 OLFM4Q6UX06 510 aa12.81□□□□□ -0.36
SMG9-207ENST00000598860 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
SMG9-207ENST00000598860 PPP4R2Q9NY27 417 aa12.81□□□□□ -0.36
SMG9-207ENST00000598860 ATXN7L1Q9ULK2 861 aaPredicted RBP12.81□□□□□ -0.36
SMG9-207ENST00000598860 BBOX1O75936 387 aa12.8□□□□□ -0.36
SMG9-207ENST00000598860 FMR1Q06787 632 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMG9-207ENST00000598860 CEP85Q6P2H3 762 aa12.8□□□□□ -0.36
SMG9-207ENST00000598860 C16orf71Q8IYS4 520 aaPredicted RBP12.8□□□□□ -0.36
SMG9-207ENST00000598860 ANKRD44Q8N8A2 993 aa12.8□□□□□ -0.36
SMG9-207ENST00000598860 DMRTB1Q96MA1 342 aa12.8□□□□□ -0.36
SMG9-207ENST00000598860 FAM129BQ96TA1 746 aa12.8□□□□□ -0.36
SMG9-207ENST00000598860 RRAGCQ9HB90 399 aa12.8□□□□□ -0.36
SMG9-207ENST00000598860 RTL9Q8NET4 1388 aa12.8□□□□□ -0.36
SMG9-207ENST00000598860 TAF1P21675 1872 aa12.79□□□□□ -0.36
SMG9-207ENST00000598860 IGHA2P01877 340 aa12.79□□□□□ -0.36
SMG9-207ENST00000598860 MAPTP10636 758 aaKnown RBP12.79□□□□□ -0.36
SMG9-207ENST00000598860 ZAP70P43403 619 aa12.79□□□□□ -0.36
SMG9-207ENST00000598860 CTSWP56202 376 aa12.79□□□□□ -0.36
SMG9-207ENST00000598860 ATP8B2P98198 1209 aa12.79□□□□□ -0.36
SMG9-207ENST00000598860 TNP2Q05952 138 aa12.79□□□□□ -0.36
SMG9-207ENST00000598860 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
SMG9-207ENST00000598860 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
SMG9-207ENST00000598860 BICC1Q9H694 974 aaKnown RBP12.79□□□□□ -0.36
SMG9-207ENST00000598860 ZNF277Q9NRM2 450 aaPredicted RBP12.79□□□□□ -0.36
SMG9-207ENST00000598860 POLIQ9UNA4 740 aa12.79□□□□□ -0.36
SMG9-207ENST00000598860 A0A1B0GUL6 1792 aa12.79□□□□□ -0.36
SMG9-207ENST00000598860 DICER1Q9UPY3 1922 aaKnown RBP12.78□□□□□ -0.36
SMG9-207ENST00000598860 GPR182O15218 404 aa12.78□□□□□ -0.36
SMG9-207ENST00000598860 FAM157BP0CG42 384 aa12.78□□□□□ -0.36
SMG9-207ENST00000598860 MZF1P28698 734 aaPredicted RBP12.78□□□□□ -0.36
SMG9-207ENST00000598860 FOXO4P98177 505 aa12.78□□□□□ -0.36
SMG9-207ENST00000598860 DSC3Q14574 896 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms