RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 PRKCZQ05513 592 aa14.65□□□□□ -0.06
PDE4C-213ENST00000598111 CWC27Q6UX04 472 aaKnown RBP14.65□□□□□ -0.06
PDE4C-213ENST00000598111 NBPF11Q86T75 865 aa14.65□□□□□ -0.06
PDE4C-213ENST00000598111 CCAR1Q8IX12 1150 aaKnown RBP14.65□□□□□ -0.06
PDE4C-213ENST00000598111 GPRC5AQ8NFJ5 357 aa14.65□□□□□ -0.06
PDE4C-213ENST00000598111 VCPKMTQ9H867 229 aa14.65□□□□□ -0.06
PDE4C-213ENST00000598111 ZMYM6O95789 1325 aa14.65□□□□□ -0.06
PDE4C-213ENST00000598111 PLXNB2O15031 1838 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 COL11A1P12107 1806 aaPredicted RBP14.64□□□□□ -0.07
PDE4C-213ENST00000598111 WDR46O15213 610 aaKnown RBP14.64□□□□□ -0.07
PDE4C-213ENST00000598111 NEFLP07196 543 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 TSPY3P0CV98 308 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 TSPY8P0CW00 308 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 HSPD1P10809 573 aaKnown RBP14.64□□□□□ -0.07
PDE4C-213ENST00000598111 ERVK-9P63128 1117 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 ERVK-24P63145 666 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 ALX1Q15699 326 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 CATSPERGQ6ZRH7 1159 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 CENPQQ7L2Z9 268 aaPredicted RBP14.64□□□□□ -0.07
PDE4C-213ENST00000598111 SPICE1Q8N0Z3 855 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 ARMC5Q96C12 935 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 CWC22Q9HCG8 908 aaKnown RBP14.64□□□□□ -0.07
PDE4C-213ENST00000598111 TXNRD2Q9NNW7 524 aa14.64□□□□□ -0.07
PDE4C-213ENST00000598111 FLOT1O75955 427 aa14.63□□□□□ -0.07
PDE4C-213ENST00000598111 GSPT1P15170 499 aaKnown RBP14.63□□□□□ -0.07
PDE4C-213ENST00000598111 CCNA1P78396 465 aa14.63□□□□□ -0.07
PDE4C-213ENST00000598111 CTDSPL2Q05D32 466 aa14.63□□□□□ -0.07
PDE4C-213ENST00000598111 SH3TC2Q8TF17 1288 aa14.63□□□□□ -0.07
PDE4C-213ENST00000598111 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.63□□□□□ -0.07
PDE4C-213ENST00000598111 TOMM22Q9NS69 142 aa14.63□□□□□ -0.07
PDE4C-213ENST00000598111 RABGAP1Q9Y3P9 1069 aa14.63□□□□□ -0.07
PDE4C-213ENST00000598111 TSPY2A6NKD2 308 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 SPDYE16A6NNV3 312 aaPredicted RBP14.62□□□□□ -0.07
PDE4C-213ENST00000598111 FGAP02671 866 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 GRK4P32298 578 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 FLT3LGP49771 235 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 PPP4R3BQ5MIZ7 849 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 SAMD1Q6SPF0 538 aaPredicted RBP14.62□□□□□ -0.07
PDE4C-213ENST00000598111 LBX2Q6XYB7 198 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 SIAH1Q8IUQ4 282 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 SLAIN1Q8ND83 568 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 CEP95Q96GE4 821 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 ZNF333Q96JL9 665 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 NYAP2Q9P242 653 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 RBPJLQ9UBG7 517 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 BIN2Q9UBW5 565 aaPredicted RBP14.62□□□□□ -0.07
PDE4C-213ENST00000598111 ANAPC4Q9UJX5 808 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 GABRQQ9UN88 632 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
PDE4C-213ENST00000598111 RAD50Q92878 1312 aa14.62□□□□□ -0.07
PDE4C-213ENST00000598111 PEX10O60683 326 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 TTLL1O95922 423 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 MAPK4P31152 587 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 TFAP4Q01664 338 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 COG2Q14746 738 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 FAM47AQ5JRC9 791 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 KIAA1755Q5JYT7 1200 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 NEDD1Q8NHV4 660 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 RUFY2Q8WXA3 655 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 SOCS4Q8WXH5 440 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 TMEM106CQ9BVX2 250 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 HOXC10Q9NYD6 342 aa14.61□□□□□ -0.07
PDE4C-213ENST00000598111 IGKV6D-41A0A0C4DH26 115 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 ADCY3O60266 1144 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 RANBP6O60518 1105 aaKnown RBP14.6□□□□□ -0.07
PDE4C-213ENST00000598111 MYCP01106 439 aaPredicted RBP14.6□□□□□ -0.07
PDE4C-213ENST00000598111 HAND2P61296 217 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 UBXN2AP68543 259 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 IRF5Q13568 498 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 RRP12Q5JTH9 1297 aaKnown RBP14.6□□□□□ -0.07
PDE4C-213ENST00000598111 FAM83BQ5T0W9 1011 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 WDR78Q5VTH9 848 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 LRRC47Q8N1G4 583 aaKnown RBP14.6□□□□□ -0.07
PDE4C-213ENST00000598111 MB21D1Q8N884 522 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 MTMR4Q9NYA4 1195 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 CLIP2Q9UDT6 1046 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 SYNPO2Q9UMS6 1093 aa14.6□□□□□ -0.07
PDE4C-213ENST00000598111 KIAA0100Q14667 2235 aaKnown RBP14.6□□□□□ -0.07
PDE4C-213ENST00000598111 ZNF236Q9UL36 1845 aa14.59□□□□□ -0.07
PDE4C-213ENST00000598111 ORC4O43929 436 aa14.59□□□□□ -0.07
PDE4C-213ENST00000598111 NDUFB10O96000 172 aa14.59□□□□□ -0.07
PDE4C-213ENST00000598111 PCP11498 1178 aaKnown RBP14.59□□□□□ -0.07
PDE4C-213ENST00000598111 ATG4CQ96DT6 458 aa14.59□□□□□ -0.07
PDE4C-213ENST00000598111 DSCC1Q9BVC3 393 aa14.59□□□□□ -0.07
PDE4C-213ENST00000598111 PORCNQ9H237 461 aa14.59□□□□□ -0.07
PDE4C-213ENST00000598111 RNF41Q9H4P4 317 aaPredicted RBP14.59□□□□□ -0.07
PDE4C-213ENST00000598111 ISY1Q9ULR0 285 aaKnown RBP14.59□□□□□ -0.07
PDE4C-213ENST00000598111 F5H6K3 240 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 CNMDO75829 334 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 ELNP15502 786 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 DSG3P32926 999 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 RGS19P49795 217 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 MLLT1Q03111 559 aaPredicted RBP14.58□□□□□ -0.08
PDE4C-213ENST00000598111 KLRC3Q07444 240 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 PLS1Q14651 629 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 Q3C1V9 767 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 GPR142Q7Z601 462 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 PLEKHH3Q7Z736 793 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 TBC1D10CQ8IV04 446 aa14.58□□□□□ -0.08
PDE4C-213ENST00000598111 GMCL1P1Q8NEA9 526 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms