RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 CNGA1P29973 690 aa15.14■□□□□ 0.01
TRIM28-212ENST00000597995 CYP2C19P33261 490 aa15.14■□□□□ 0.01
TRIM28-212ENST00000597995 OLFML2BQ68BL8 750 aa15.14■□□□□ 0.01
TRIM28-212ENST00000597995 TMEM179Q6ZVK1 233 aa15.14■□□□□ 0.01
TRIM28-212ENST00000597995 CLASRPQ8N2M8 674 aaKnown RBP15.14■□□□□ 0.01
TRIM28-212ENST00000597995 MB21D1Q8N884 522 aa15.14■□□□□ 0.01
TRIM28-212ENST00000597995 MOV10L1Q9BXT6 1211 aaKnown RBP15.14■□□□□ 0.01
TRIM28-212ENST00000597995 IL1RAPL2Q9NP60 686 aa15.14■□□□□ 0.01
TRIM28-212ENST00000597995 SWAP70Q9UH65 585 aa15.14■□□□□ 0.01
TRIM28-212ENST00000597995 DNAH12Q6ZR08 3092 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 FRMPD3Q5JV73 1810 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 TCRBV5S4A2TA0A5A2 114 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
TRIM28-212ENST00000597995 CYBAP13498 195 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 MDM2Q00987 491 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-212ENST00000597995 Q7L0L9 218 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 DPP9Q86TI2 863 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 RPAP2Q8IXW5 612 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-212ENST00000597995 ARRDC4Q8NCT1 418 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 TRPV1Q8NER1 839 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 KIF1BPQ96EK5 621 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 LBHD1Q9BQE6 289 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-212ENST00000597995 SPATC1LQ9H0A9 340 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 DCP1AQ9NPI6 582 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-212ENST00000597995 ZNF532Q9HCE3 1301 aa15.13■□□□□ 0.01
TRIM28-212ENST00000597995 ADORA2AP29274 412 aa15.12■□□□□ 0.01
TRIM28-212ENST00000597995 DSG3P32926 999 aa15.12■□□□□ 0.01
TRIM28-212ENST00000597995 FAM109BQ6ICB4 259 aaPredicted RBP15.12■□□□□ 0.01
TRIM28-212ENST00000597995 ABRAQ8N0Z2 381 aa15.12■□□□□ 0.01
TRIM28-212ENST00000597995 MROH8Q9H579 483 aa15.12■□□□□ 0.01
TRIM28-212ENST00000597995 SLC5A4Q9NY91 659 aa15.12■□□□□ 0.01
TRIM28-212ENST00000597995 NAV1Q8NEY1 1877 aa15.12■□□□□ 0.01
TRIM28-212ENST00000597995 ZNF236Q9UL36 1845 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 GOLIM4O00461 696 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 ERCC3P19447 782 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 EVX2Q03828 476 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 SDR42E1Q8WUS8 393 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 CCDC17Q96LX7 622 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 TANGO6Q9C0B7 1094 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 SH2D4AQ9H788 454 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 ATP8A2Q9NTI2 1148 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 PRKAG2Q9UGJ0 569 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 TMX2Q9Y320 296 aa15.11■□□□□ 0.01
TRIM28-212ENST00000597995 RLFQ13129 1914 aa15.1■□□□□ 0.01
TRIM28-212ENST00000597995 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
TRIM28-212ENST00000597995 SEPT4O43236 478 aa15.1■□□□□ 0.01
TRIM28-212ENST00000597995 COBLO75128 1261 aa15.1■□□□□ 0.01
TRIM28-212ENST00000597995 HMMRO75330 724 aa15.1■□□□□ 0.01
TRIM28-212ENST00000597995 IFIT2P09913 472 aaKnown RBP15.1■□□□□ 0.01
TRIM28-212ENST00000597995 ATN1P54259 1190 aaPredicted RBP15.1■□□□□ 0.01
TRIM28-212ENST00000597995 SIAH1Q8IUQ4 282 aa15.1■□□□□ 0.01
TRIM28-212ENST00000597995 LCORLQ8N3X6 602 aa15.1■□□□□ 0.01
TRIM28-212ENST00000597995 DNAJC2Q99543 621 aaKnown RBP15.1■□□□□ 0.01
TRIM28-212ENST00000597995 ARHGEF10LQ9HCE6 1279 aa15.1■□□□□ 0.01
TRIM28-212ENST00000597995 KBTBD13C9JR72 458 aa15.09■□□□□ 0.01
TRIM28-212ENST00000597995 RAB11FIP3O75154 756 aa15.09■□□□□ 0.01
TRIM28-212ENST00000597995 CYP2D6P10635 497 aa15.09■□□□□ 0.01
TRIM28-212ENST00000597995 RTP1P59025 263 aa15.09■□□□□ 0.01
TRIM28-212ENST00000597995 KIAA1755Q5JYT7 1200 aa15.09■□□□□ 0.01
TRIM28-212ENST00000597995 GJC2Q5T442 439 aaPredicted RBP15.09■□□□□ 0.01
TRIM28-212ENST00000597995 SLC39A5Q6ZMH5 540 aa15.09■□□□□ 0.01
TRIM28-212ENST00000597995 SLC44A5Q8NCS7 719 aa15.09■□□□□ 0.01
TRIM28-212ENST00000597995 VCPKMTQ9H867 229 aa15.09■□□□□ 0.01
TRIM28-212ENST00000597995 ARMT1Q9H993 441 aa15.09■□□□□ 0.01
TRIM28-212ENST00000597995 APBB1O00213 710 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 WDR46O15213 610 aaKnown RBP15.08■□□□□ 0
TRIM28-212ENST00000597995 FLOT1O75955 427 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 SLC25A27O95847 323 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 FCER1AP12319 257 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 AKR1B1P15121 316 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 ADD2P35612 726 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 ICA1Q05084 483 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 PLS1Q14651 629 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 C12orf60Q5U649 245 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 NCAPG2Q86XI2 1143 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 DYNLL2Q96FJ2 89 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.08■□□□□ 01e-8■■■□□ 14.9
TRIM28-212ENST00000597995 PAG1Q9NWQ8 432 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 NRBP1Q9UHY1 535 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 ADAMTS5Q9UNA0 930 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 A0A0G2JMZ2 1700 aa15.08■□□□□ 0
TRIM28-212ENST00000597995 PRKAB2O43741 272 aa15.07■□□□□ 0
TRIM28-212ENST00000597995 MBD4O95243 580 aa15.07■□□□□ 0
TRIM28-212ENST00000597995 ATP5JP18859 108 aa15.07■□□□□ 0
TRIM28-212ENST00000597995 CDK8P49336 464 aa15.07■□□□□ 0
TRIM28-212ENST00000597995 SNX17Q15036 470 aa15.07■□□□□ 0
TRIM28-212ENST00000597995 C1orf53Q5VUE5 145 aa15.07■□□□□ 0
TRIM28-212ENST00000597995 AMOTL1Q8IY63 956 aa15.07■□□□□ 0
TRIM28-212ENST00000597995 ATG4CQ96DT6 458 aa15.07■□□□□ 0
TRIM28-212ENST00000597995 MAML3Q96JK9 1138 aa15.07■□□□□ 0
TRIM28-212ENST00000597995 ATP11BQ9Y2G3 1177 aa15.07■□□□□ 0
TRIM28-212ENST00000597995 CUL9Q8IWT3 2517 aa15.06■□□□□ 0
TRIM28-212ENST00000597995 UBE3CQ15386 1083 aa15.06■□□□□ 0
TRIM28-212ENST00000597995 C16orf86Q6ZW13 317 aa15.06■□□□□ 0
TRIM28-212ENST00000597995 SPICE1Q8N0Z3 855 aa15.06■□□□□ 0
TRIM28-212ENST00000597995 DDRGK1Q96HY6 314 aa15.06■□□□□ 0
TRIM28-212ENST00000597995 HAUS7Q99871 368 aa15.06■□□□□ 0
TRIM28-212ENST00000597995 BOLA2Q9H3K6 86 aa15.06■□□□□ 0
TRIM28-212ENST00000597995 KANSL2Q9H9L4 492 aa15.06■□□□□ 0
TRIM28-212ENST00000597995 DIS3Q9Y2L1 958 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms