RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 CCL14Q16627 93 aa18.65■□□□□ 0.58
PPFIA4-208ENST00000597023 ARHGEF10LQ9HCE6 1279 aa18.65■□□□□ 0.58
PPFIA4-208ENST00000597023 TDO2P48775 406 aa18.64■□□□□ 0.57
PPFIA4-208ENST00000597023 COG2Q14746 738 aa18.64■□□□□ 0.57
PPFIA4-208ENST00000597023 SBK1Q52WX2 424 aa18.64■□□□□ 0.57
PPFIA4-208ENST00000597023 MORN1Q5T089 497 aa18.64■□□□□ 0.57
PPFIA4-208ENST00000597023 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.64■□□□□ 0.57
PPFIA4-208ENST00000597023 VCPKMTQ9H867 229 aa18.64■□□□□ 0.57
PPFIA4-208ENST00000597023 PAK6Q9NQU5 681 aaPredicted RBP18.64■□□□□ 0.57
PPFIA4-208ENST00000597023 TMX2Q9Y320 296 aa18.64■□□□□ 0.57
PPFIA4-208ENST00000597023 SALL3Q9BXA9 1300 aa18.64■□□□□ 0.57
PPFIA4-208ENST00000597023 PATL2C9JE40 543 aaKnown RBP18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 PRDM1O75626 825 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 FARP2O94887 1054 aaPredicted RBP18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 RASA1P20936 1047 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 CCNA1P78396 465 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 HDAC1Q13547 482 aaPredicted RBP18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 LBX2Q6XYB7 198 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 CCDC129Q6ZRS4 1044 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 EXOC6Q8TAG9 804 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 SOCS4Q8WXH5 440 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 USP6NLQ92738 828 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 DPF3Q92784 378 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 GCC1Q96CN9 775 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 MKNK2Q9HBH9 465 aa18.63■□□□□ 0.57
PPFIA4-208ENST00000597023 MYH7P12883 1935 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 FLOT1O75955 427 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 PRKAR2AP13861 404 aaKnown RBP18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 RGS2P41220 211 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 LRRFIP1Q32MZ4 808 aaKnown RBP18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 ZMYM1Q5SVZ6 1142 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 B4GALNT3Q6L9W6 998 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 GIMAP6Q6P9H5 292 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 UBE2Q1Q7Z7E8 422 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 IFNL3Q8IZI9 196 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 ATG4CQ96DT6 458 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 KANSL2Q9H9L4 492 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 HMX1Q9NP08 348 aaPredicted RBP18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 HOXC10Q9NYD6 342 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 RPTORQ8N122 1335 aa18.62■□□□□ 0.57
PPFIA4-208ENST00000597023 ZKSCAN1P17029 563 aaPredicted RBP18.61■□□□□ 0.57
PPFIA4-208ENST00000597023 GNAT2P19087 354 aa18.61■□□□□ 0.57
PPFIA4-208ENST00000597023 PTPREP23469 700 aa18.61■□□□□ 0.57
PPFIA4-208ENST00000597023 DSG3P32926 999 aa18.61■□□□□ 0.57
PPFIA4-208ENST00000597023 PDE1AP54750 535 aa18.61■□□□□ 0.57
PPFIA4-208ENST00000597023 PLS1Q14651 629 aa18.61■□□□□ 0.57
PPFIA4-208ENST00000597023 LPAR1Q92633 364 aa18.61■□□□□ 0.57
PPFIA4-208ENST00000597023 MOV10L1Q9BXT6 1211 aaKnown RBP18.61■□□□□ 0.57
PPFIA4-208ENST00000597023 LNPKQ9C0E8 428 aa18.61■□□□□ 0.57
PPFIA4-208ENST00000597023 SH2D4AQ9H788 454 aa18.61■□□□□ 0.57
PPFIA4-208ENST00000597023 PLXNB2O15031 1838 aa18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 H0YGN5 161 aa18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 IGHDP01880 384 aa18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 XRCC5P13010 732 aaKnown RBP18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 CACNB2Q08289 660 aaPredicted RBP18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 MAP2K5Q13163 448 aa18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 DIS3LQ8TF46 1054 aaKnown RBP18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 APBA2Q99767 749 aa18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 CRISPLD2Q9H0B8 497 aa18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 FBXO28Q9NVF7 368 aa18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 FLRT1Q9NZU1 646 aa18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 IVNS1ABPQ9Y6Y0 642 aa18.6■□□□□ 0.57
PPFIA4-208ENST00000597023 WDR46O15213 610 aaKnown RBP18.59■□□□□ 0.57
PPFIA4-208ENST00000597023 AAMPQ13685 434 aa18.59■□□□□ 0.57
PPFIA4-208ENST00000597023 FAM83BQ5T0W9 1011 aa18.59■□□□□ 0.57
PPFIA4-208ENST00000597023 NPLOC4Q8TAT6 608 aa18.59■□□□□ 0.57
PPFIA4-208ENST00000597023 PAWRQ96IZ0 340 aaKnown RBP18.59■□□□□ 0.57
PPFIA4-208ENST00000597023 NUP88Q99567 741 aaPredicted RBP18.59■□□□□ 0.57
PPFIA4-208ENST00000597023 SPATC1LQ9H0A9 340 aa18.59■□□□□ 0.57
PPFIA4-208ENST00000597023 STAP2Q9UGK3 403 aa18.59■□□□□ 0.57
PPFIA4-208ENST00000597023 SLC15A5A6NIM6 579 aa18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 ERCC3P19447 782 aa18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 CCND3P30281 292 aaPredicted RBP18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 MAP3K21Q5TCX8 1036 aa18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 ZNF444Q8N0Y2 327 aaPredicted RBP18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 EVI5LQ96CN4 794 aa18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 NACAP1Q9BZK3 213 aa18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 NAPBQ9H115 298 aa18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 RWDD1Q9H446 243 aaPredicted RBP18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 GOPCQ9HD26 462 aa18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 CLIP2Q9UDT6 1046 aa18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 SUPT16HQ9Y5B9 1047 aaKnown RBP18.58■□□□□ 0.56
PPFIA4-208ENST00000597023 ROBO3Q96MS0 1386 aa18.57■□□□□ 0.56
PPFIA4-208ENST00000597023 FOXP2O15409 715 aa18.57■□□□□ 0.56
PPFIA4-208ENST00000597023 GRB14Q14449 540 aa18.57■□□□□ 0.56
PPFIA4-208ENST00000597023 FAM47AQ5JRC9 791 aa18.57■□□□□ 0.56
PPFIA4-208ENST00000597023 VPS53Q5VIR6 699 aa18.57■□□□□ 0.56
PPFIA4-208ENST00000597023 NCAPG2Q86XI2 1143 aa18.57■□□□□ 0.56
PPFIA4-208ENST00000597023 HTATIP2Q9BUP3 242 aa18.57■□□□□ 0.56
PPFIA4-208ENST00000597023 INCENPQ9NQS7 918 aa18.57■□□□□ 0.56
PPFIA4-208ENST00000597023 CTDSPL2Q05D32 466 aa18.56■□□□□ 0.56
PPFIA4-208ENST00000597023 PPARAQ07869 468 aa18.56■□□□□ 0.56
PPFIA4-208ENST00000597023 TMEM132BQ14DG7 1078 aa18.56■□□□□ 0.56
PPFIA4-208ENST00000597023 TRMT44Q8IYL2 757 aaKnown RBP18.56■□□□□ 0.56
PPFIA4-208ENST00000597023 CHMP4CQ96CF2 233 aa18.56■□□□□ 0.56
PPFIA4-208ENST00000597023 FAM227BQ96M60 508 aa18.56■□□□□ 0.56
PPFIA4-208ENST00000597023 NYAP2Q9P242 653 aa18.56■□□□□ 0.56
PPFIA4-208ENST00000597023 TRIM6-TRIM34B2RNG4 842 aa18.55■□□□□ 0.56
PPFIA4-208ENST00000597023 F5H6K3 240 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms