RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 ZNFX1Q9P2E3 1918 aaKnown RBP15.65■□□□□ 0.1
LIG1-212ENST00000596549 FOXP2O15409 715 aa15.65■□□□□ 0.1
LIG1-212ENST00000596549 GIMAP6Q6P9H5 292 aa15.65■□□□□ 0.1
LIG1-212ENST00000596549 U2AF1L4Q8WU68 220 aaKnown RBP15.65■□□□□ 0.1
LIG1-212ENST00000596549 SOCS4Q8WXH5 440 aa15.65■□□□□ 0.1
LIG1-212ENST00000596549 USP6NLQ92738 828 aa15.65■□□□□ 0.1
LIG1-212ENST00000596549 CCDC17Q96LX7 622 aa15.65■□□□□ 0.1
LIG1-212ENST00000596549 PAK6Q9NQU5 681 aaPredicted RBP15.65■□□□□ 0.1
LIG1-212ENST00000596549 RABGAP1Q9Y3P9 1069 aa15.65■□□□□ 0.1
LIG1-212ENST00000596549 HMGCRP04035 888 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 CYP2B6P20813 491 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 RASA1P20936 1047 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 MAPK4P31152 587 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 PDE1AP54750 535 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 ZMYM1Q5SVZ6 1142 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 MORN1Q5T089 497 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 STK11IPQ8N1F8 1099 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 EXOC6Q8TAG9 804 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 VCPKMTQ9H867 229 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 ARHGEF10LQ9HCE6 1279 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 STAP2Q9UGK3 403 aa15.64■□□□□ 0.09
LIG1-212ENST00000596549 EEF2P13639 858 aaKnown RBP15.63■□□□□ 0.09
LIG1-212ENST00000596549 GNAT2P19087 354 aa15.63■□□□□ 0.09
LIG1-212ENST00000596549 TDO2P48775 406 aa15.63■□□□□ 0.09
LIG1-212ENST00000596549 SMC5Q8IY18 1101 aa15.63■□□□□ 0.09
LIG1-212ENST00000596549 SPICE1Q8N0Z3 855 aa15.63■□□□□ 0.09
LIG1-212ENST00000596549 NKX2-3Q8TAU0 364 aa15.63■□□□□ 0.09
LIG1-212ENST00000596549 LPAR1Q92633 364 aa15.63■□□□□ 0.09
LIG1-212ENST00000596549 NUDT12Q9BQG2 462 aa15.63■□□□□ 0.09
LIG1-212ENST00000596549 TANGO6Q9C0B7 1094 aa15.63■□□□□ 0.09
LIG1-212ENST00000596549 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.63■□□□□ 0.09
LIG1-212ENST00000596549 PLIN4Q96Q06 1357 aa15.62■□□□□ 0.09
LIG1-212ENST00000596549 MINDY4BA8MYZ0 360 aa15.62■□□□□ 0.09
LIG1-212ENST00000596549 SGPL1O95470 568 aa15.62■□□□□ 0.09
LIG1-212ENST00000596549 CCL14Q16627 93 aa15.62■□□□□ 0.09
LIG1-212ENST00000596549 CCDC129Q6ZRS4 1044 aa15.62■□□□□ 0.09
LIG1-212ENST00000596549 PLEKHH3Q7Z736 793 aa15.62■□□□□ 0.09
LIG1-212ENST00000596549 IFNL3Q8IZI9 196 aa15.62■□□□□ 0.09
LIG1-212ENST00000596549 DEFB118Q96PH6 123 aa15.62■□□□□ 0.09
LIG1-212ENST00000596549 LNPKQ9C0E8 428 aa15.62■□□□□ 0.09
LIG1-212ENST00000596549 SH2D4AQ9H788 454 aa15.62■□□□□ 0.09
LIG1-212ENST00000596549 WDR46O15213 610 aaKnown RBP15.61■□□□□ 0.09
LIG1-212ENST00000596549 IGHDP01880 384 aa15.61■□□□□ 0.09
LIG1-212ENST00000596549 XRCC5P13010 732 aaKnown RBP15.61■□□□□ 0.09
LIG1-212ENST00000596549 AAMPQ13685 434 aa15.61■□□□□ 0.09
LIG1-212ENST00000596549 LRRFIP1Q32MZ4 808 aaKnown RBP15.61■□□□□ 0.09
LIG1-212ENST00000596549 MAP3K21Q5TCX8 1036 aa15.61■□□□□ 0.09
LIG1-212ENST00000596549 ATG4CQ96DT6 458 aa15.61■□□□□ 0.09
LIG1-212ENST00000596549 APBA2Q99767 749 aa15.61■□□□□ 0.09
LIG1-212ENST00000596549 CRISPLD2Q9H0B8 497 aa15.61■□□□□ 0.09
LIG1-212ENST00000596549 IGKV6D-41A0A0C4DH26 115 aa15.6■□□□□ 0.09
LIG1-212ENST00000596549 PATL2C9JE40 543 aaKnown RBP15.6■□□□□ 0.09
LIG1-212ENST00000596549 PRDM1O75626 825 aa15.6■□□□□ 0.09
LIG1-212ENST00000596549 FARP2O94887 1054 aaPredicted RBP15.6■□□□□ 0.09
LIG1-212ENST00000596549 DSG3P32926 999 aa15.6■□□□□ 0.09
LIG1-212ENST00000596549 RGS2P41220 211 aa15.6■□□□□ 0.09
LIG1-212ENST00000596549 GRB14Q14449 540 aa15.6■□□□□ 0.09
LIG1-212ENST00000596549 COG2Q14746 738 aa15.6■□□□□ 0.09
LIG1-212ENST00000596549 MOV10L1Q9BXT6 1211 aaKnown RBP15.6■□□□□ 0.09
LIG1-212ENST00000596549 KANSL2Q9H9L4 492 aa15.6■□□□□ 0.09
LIG1-212ENST00000596549 A0A0D9SFI3 127 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 FLOT1O75955 427 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 APPP05067 770 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 PRKAR2AP13861 404 aaKnown RBP15.59■□□□□ 0.09
LIG1-212ENST00000596549 ZKSCAN1P17029 563 aaPredicted RBP15.59■□□□□ 0.09
LIG1-212ENST00000596549 PTPREP23469 700 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 CCNA1P78396 465 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 ATP2B2Q01814 1243 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 MAP2K5Q13163 448 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 VPS53Q5VIR6 699 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 EVI5LQ96CN4 794 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 SPATC1LQ9H0A9 340 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 FBXO28Q9NVF7 368 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 FLRT1Q9NZU1 646 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 ZBTB47Q9UFB7 747 aaPredicted RBP15.59■□□□□ 0.09
LIG1-212ENST00000596549 RPTORQ8N122 1335 aa15.59■□□□□ 0.09
LIG1-212ENST00000596549 LRRC37A2A6NM11 1700 aa15.58■□□□□ 0.08
LIG1-212ENST00000596549 PPARAQ07869 468 aa15.58■□□□□ 0.08
LIG1-212ENST00000596549 FAM83BQ5T0W9 1011 aa15.58■□□□□ 0.08
LIG1-212ENST00000596549 WDR78Q5VTH9 848 aa15.58■□□□□ 0.08
LIG1-212ENST00000596549 B4GALNT3Q6L9W6 998 aa15.58■□□□□ 0.08
LIG1-212ENST00000596549 CCAR1Q8IX12 1150 aaKnown RBP15.58■□□□□ 0.08
LIG1-212ENST00000596549 NPLOC4Q8TAT6 608 aa15.58■□□□□ 0.08
LIG1-212ENST00000596549 DIS3LQ8TF46 1054 aaKnown RBP15.58■□□□□ 0.08
LIG1-212ENST00000596549 FAM227BQ96M60 508 aa15.58■□□□□ 0.08
LIG1-212ENST00000596549 NAPBQ9H115 298 aa15.58■□□□□ 0.08
LIG1-212ENST00000596549 MKNK2Q9HBH9 465 aa15.58■□□□□ 0.08
LIG1-212ENST00000596549 HMX1Q9NP08 348 aaPredicted RBP15.58■□□□□ 0.08
LIG1-212ENST00000596549 SLC15A5A6NIM6 579 aa15.57■□□□□ 0.08
LIG1-212ENST00000596549 MNX1P50219 401 aaPredicted RBP15.57■□□□□ 0.08
LIG1-212ENST00000596549 CACNB2Q08289 660 aaPredicted RBP15.57■□□□□ 0.08
LIG1-212ENST00000596549 CEP95Q96GE4 821 aa15.57■□□□□ 0.08
LIG1-212ENST00000596549 NUP88Q99567 741 aaPredicted RBP15.57■□□□□ 0.08
LIG1-212ENST00000596549 CWC22Q9HCG8 908 aaKnown RBP15.57■□□□□ 0.08
LIG1-212ENST00000596549 GOPCQ9HD26 462 aa15.57■□□□□ 0.08
LIG1-212ENST00000596549 HOXC10Q9NYD6 342 aa15.57■□□□□ 0.08
LIG1-212ENST00000596549 NYAP2Q9P242 653 aa15.57■□□□□ 0.08
LIG1-212ENST00000596549 ADAMTS5Q9UNA0 930 aa15.57■□□□□ 0.08
LIG1-212ENST00000596549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.57■□□□□ 0.08
LIG1-212ENST00000596549 SUPT16HQ9Y5B9 1047 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms