RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 COG2Q14746 738 aa20.48■□□□□ 0.87
CCDC9-202ENST00000595659 GPATCH3Q96I76 525 aa20.48■□□□□ 0.87
CCDC9-202ENST00000595659 APBA2Q99767 749 aa20.48■□□□□ 0.87
CCDC9-202ENST00000595659 RBM27Q9P2N5 1060 aaKnown RBP20.48■□□□□ 0.87
CCDC9-202ENST00000595659 PTPREP23469 700 aa20.47■□□□□ 0.87
CCDC9-202ENST00000595659 MNX1P50219 401 aaPredicted RBP20.47■□□□□ 0.87
CCDC9-202ENST00000595659 LBX2Q6XYB7 198 aa20.47■□□□□ 0.87
CCDC9-202ENST00000595659 C16orf86Q6ZW13 317 aa20.47■□□□□ 0.87
CCDC9-202ENST00000595659 TRMT44Q8IYL2 757 aaKnown RBP20.47■□□□□ 0.87
CCDC9-202ENST00000595659 KBTBD3Q8NAB2 608 aa20.47■□□□□ 0.87
CCDC9-202ENST00000595659 STRBPQ96SI9 672 aaKnown RBP20.47■□□□□ 0.87
CCDC9-202ENST00000595659 ARHGEF10LQ9HCE6 1279 aa20.47■□□□□ 0.87
CCDC9-202ENST00000595659 FLRT1Q9NZU1 646 aa20.47■□□□□ 0.87
CCDC9-202ENST00000595659 DOCK3Q8IZD9 2030 aa20.47■□□□□ 0.87
CCDC9-202ENST00000595659 NAV1Q8NEY1 1877 aa20.46■□□□□ 0.87
CCDC9-202ENST00000595659 GLRX3O76003 335 aaKnown RBP20.46■□□□□ 0.87
CCDC9-202ENST00000595659 OSBP2Q969R2 916 aa20.46■□□□□ 0.87
CCDC9-202ENST00000595659 CCDC17Q96LX7 622 aa20.46■□□□□ 0.87
CCDC9-202ENST00000595659 MOV10L1Q9BXT6 1211 aaKnown RBP20.46■□□□□ 0.87
CCDC9-202ENST00000595659 HOXC10Q9NYD6 342 aa20.46■□□□□ 0.87
CCDC9-202ENST00000595659 OGDHLQ9ULD0 1010 aa20.46■□□□□ 0.87
CCDC9-202ENST00000595659 IVNS1ABPQ9Y6Y0 642 aa20.46■□□□□ 0.87
CCDC9-202ENST00000595659 SLC15A5A6NIM6 579 aa20.45■□□□□ 0.86
CCDC9-202ENST00000595659 EEF2P13639 858 aaKnown RBP20.45■□□□□ 0.86
CCDC9-202ENST00000595659 CAPN2P17655 700 aa20.45■□□□□ 0.86
CCDC9-202ENST00000595659 ANKLE1Q8NAG6 615 aa20.45■□□□□ 0.86
CCDC9-202ENST00000595659 NPLOC4Q8TAT6 608 aa20.45■□□□□ 0.86
CCDC9-202ENST00000595659 OTUD7AQ8TE49 926 aaPredicted RBP20.45■□□□□ 0.86
CCDC9-202ENST00000595659 NBPF3Q9H094 633 aa20.45■□□□□ 0.86
CCDC9-202ENST00000595659 VCPKMTQ9H867 229 aa20.45■□□□□ 0.86
CCDC9-202ENST00000595659 TMX2Q9Y320 296 aa20.45■□□□□ 0.86
CCDC9-202ENST00000595659 MINDY4BA8MYZ0 360 aa20.44■□□□□ 0.86
CCDC9-202ENST00000595659 RNF113AO15541 343 aaKnown RBP20.44■□□□□ 0.86
CCDC9-202ENST00000595659 RAD21O60216 631 aa20.44■□□□□ 0.86
CCDC9-202ENST00000595659 FLOT1O75955 427 aa20.44■□□□□ 0.86
CCDC9-202ENST00000595659 GRB14Q14449 540 aa20.44■□□□□ 0.86
CCDC9-202ENST00000595659 PLS1Q14651 629 aa20.44■□□□□ 0.86
CCDC9-202ENST00000595659 C7orf61Q8IZ16 206 aa20.44■□□□□ 0.86
CCDC9-202ENST00000595659 ATG4CQ96DT6 458 aa20.44■□□□□ 0.86
CCDC9-202ENST00000595659 SPATC1LQ9H0A9 340 aa20.44■□□□□ 0.86
CCDC9-202ENST00000595659 C11orf49Q9H6J7 331 aa20.44■□□□□ 0.86
CCDC9-202ENST00000595659 PLXNB2O15031 1838 aa20.43■□□□□ 0.86
CCDC9-202ENST00000595659 GSG1L2A8MUP6 293 aa20.43■□□□□ 0.86
CCDC9-202ENST00000595659 M0R2C6 588 aa20.43■□□□□ 0.86
CCDC9-202ENST00000595659 DSG3P32926 999 aa20.43■□□□□ 0.86
CCDC9-202ENST00000595659 MFSD14CQ5VZR4 134 aa20.43■□□□□ 0.86
CCDC9-202ENST00000595659 LHX8Q68G74 356 aa20.43■□□□□ 0.86
CCDC9-202ENST00000595659 APPBP2Q92624 585 aa20.43■□□□□ 0.86
CCDC9-202ENST00000595659 LPAR1Q92633 364 aa20.43■□□□□ 0.86
CCDC9-202ENST00000595659 SH2D4AQ9H788 454 aa20.43■□□□□ 0.86
CCDC9-202ENST00000595659 PCDH10Q9P2E7 1040 aa20.43■□□□□ 0.86
CCDC9-202ENST00000595659 ERCC3P19447 782 aa20.42■□□□□ 0.86
CCDC9-202ENST00000595659 CYP2C19P33261 490 aa20.42■□□□□ 0.86
CCDC9-202ENST00000595659 DPP9Q86TI2 863 aa20.42■□□□□ 0.86
CCDC9-202ENST00000595659 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCDC9-202ENST00000595659 KANSL2Q9H9L4 492 aa20.42■□□□□ 0.86
CCDC9-202ENST00000595659 FBXO28Q9NVF7 368 aa20.42■□□□□ 0.86
CCDC9-202ENST00000595659 ARPP21Q9UBL0 812 aaPredicted RBP20.42■□□□□ 0.86
CCDC9-202ENST00000595659 STAP2Q9UGK3 403 aa20.42■□□□□ 0.86
CCDC9-202ENST00000595659 ZMYND8Q9ULU4 1186 aaPredicted RBP20.42■□□□□ 0.86
CCDC9-202ENST00000595659 GPAA1O43292 621 aa20.41■□□□□ 0.86
CCDC9-202ENST00000595659 APPP05067 770 aa20.41■□□□□ 0.86
CCDC9-202ENST00000595659 ADORA2AP29274 412 aa20.41■□□□□ 0.86
CCDC9-202ENST00000595659 CNGA1P29973 690 aa20.41■□□□□ 0.86
CCDC9-202ENST00000595659 RRP1P56182 461 aaKnown RBP20.41■□□□□ 0.86
CCDC9-202ENST00000595659 NCAPG2Q86XI2 1143 aa20.41■□□□□ 0.86
CCDC9-202ENST00000595659 SEC62Q99442 399 aaKnown RBP20.41■□□□□ 0.86
CCDC9-202ENST00000595659 WDR46O15213 610 aaKnown RBP20.4■□□□□ 0.86
CCDC9-202ENST00000595659 SBK1Q52WX2 424 aa20.4■□□□□ 0.86
CCDC9-202ENST00000595659 PRO3102Q9H379 93 aa20.4■□□□□ 0.86
CCDC9-202ENST00000595659 MKNK2Q9HBH9 465 aa20.4■□□□□ 0.86
CCDC9-202ENST00000595659 EPB41L4AQ9HCS5 686 aaPredicted RBP20.4■□□□□ 0.86
CCDC9-202ENST00000595659 PFASO15067 1338 aa20.39■□□□□ 0.85
CCDC9-202ENST00000595659 COBLO75128 1261 aa20.39■□□□□ 0.85
CCDC9-202ENST00000595659 HOXC6P09630 235 aa20.39■□□□□ 0.85
CCDC9-202ENST00000595659 SYN1P17600 705 aa20.39■□□□□ 0.85
CCDC9-202ENST00000595659 RASA1P20936 1047 aa20.39■□□□□ 0.85
CCDC9-202ENST00000595659 TMEM132BQ14DG7 1078 aa20.39■□□□□ 0.85
CCDC9-202ENST00000595659 MB21D1Q8N884 522 aa20.39■□□□□ 0.85
CCDC9-202ENST00000595659 TRPV1Q8NER1 839 aa20.39■□□□□ 0.85
CCDC9-202ENST00000595659 PI4K2BQ8TCG2 481 aa20.39■□□□□ 0.85
CCDC9-202ENST00000595659 CRBNQ96SW2 442 aa20.39■□□□□ 0.85
CCDC9-202ENST00000595659 NUP88Q99567 741 aaPredicted RBP20.39■□□□□ 0.85
CCDC9-202ENST00000595659 PRDM1O75626 825 aa20.38■□□□□ 0.85
CCDC9-202ENST00000595659 ZFYP08048 801 aaPredicted RBP20.38■□□□□ 0.85
CCDC9-202ENST00000595659 TDO2P48775 406 aa20.38■□□□□ 0.85
CCDC9-202ENST00000595659 FAM83BQ5T0W9 1011 aa20.38■□□□□ 0.85
CCDC9-202ENST00000595659 SHCBP1Q8NEM2 672 aa20.38■□□□□ 0.85
CCDC9-202ENST00000595659 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
CCDC9-202ENST00000595659 GOPCQ9HD26 462 aa20.38■□□□□ 0.85
CCDC9-202ENST00000595659 TTC41PQ6P2S7 1318 aa20.37■□□□□ 0.85
CCDC9-202ENST00000595659 ERC2O15083 957 aa20.37■□□□□ 0.85
CCDC9-202ENST00000595659 STRNO43815 780 aa20.37■□□□□ 0.85
CCDC9-202ENST00000595659 GIMAP6Q6P9H5 292 aa20.37■□□□□ 0.85
CCDC9-202ENST00000595659 FSD1Q9BTV5 496 aa20.37■□□□□ 0.85
CCDC9-202ENST00000595659 MROH8Q9H579 483 aa20.37■□□□□ 0.85
CCDC9-202ENST00000595659 DDX20Q9UHI6 824 aaKnown RBP20.37■□□□□ 0.85
CCDC9-202ENST00000595659 PATL2C9JE40 543 aaKnown RBP20.36■□□□□ 0.85
CCDC9-202ENST00000595659 PRAMEF19Q5SWL8 479 aa20.36■□□□□ 0.85
CCDC9-202ENST00000595659 ANKRD45Q5TZF3 282 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms