RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 PTCH2Q9Y6C5 1203 aa16.21■□□□□ 0.19
TMEM38A-202ENST00000595452 CENPFP49454 3210 aa16.21■□□□□ 0.18
TMEM38A-202ENST00000595452 RAD50Q92878 1312 aa16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 TSPY2A6NKD2 308 aa16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 HSPD1P10809 573 aaKnown RBP16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 EEF2P13639 858 aaKnown RBP16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 CATSPERGQ6ZRH7 1159 aa16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 P2RX7Q99572 595 aaKnown RBP16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 PAGR1Q9BTK6 254 aa16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 RNF41Q9H4P4 317 aaPredicted RBP16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 TOMM22Q9NS69 142 aa16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 HOXC10Q9NYD6 342 aa16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 NYAP2Q9P242 653 aa16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 ANAPC4Q9UJX5 808 aa16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 RABGAP1Q9Y3P9 1069 aa16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 PLIN4Q96Q06 1357 aa16.2■□□□□ 0.18
TMEM38A-202ENST00000595452 RBBP6Q7Z6E9 1792 aaKnown RBP16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 PRDM1O75626 825 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 TTLL1O95922 423 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 PDE4AP27815 886 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 MAPK4P31152 587 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 ERVK-9P63128 1117 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 ERVK-24P63145 666 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 COG2Q14746 738 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 VPS53Q5VIR6 699 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 LBX2Q6XYB7 198 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 MB21D1Q8N884 522 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 SLAIN1Q8ND83 568 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 SOCS4Q8WXH5 440 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 CCDC136Q96JN2 1154 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 CTNNA3Q9UI47 895 aa16.19■□□□□ 0.18
TMEM38A-202ENST00000595452 SMIM22K7EJ46 135 aa16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 FLOT1O75955 427 aa16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 FGAP02671 866 aa16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 UBXN2AP68543 259 aa16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 ZNF589Q86UQ0 364 aaPredicted RBP16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 CLEC10AQ8IUN9 316 aa16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 SPICE1Q8N0Z3 855 aa16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 NEDD1Q8NHV4 660 aa16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 ARMC5Q96C12 935 aa16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 TMEM106CQ9BVX2 250 aa16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 BIN2Q9UBW5 565 aaPredicted RBP16.18■□□□□ 0.18
TMEM38A-202ENST00000595452 PARP14Q460N5 1801 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 A0A0G2JMZ2 1700 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 ZNF213O14771 459 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 RANBP6O60518 1105 aaKnown RBP16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 GSPT1P15170 499 aaKnown RBP16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 GRK4P32298 578 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 TFAP4Q01664 338 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 PRKCZQ05513 592 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 CTDSPL2Q05D32 466 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 IRF5Q13568 498 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 DSCC1Q9BVC3 393 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 CLIP2Q9UDT6 1046 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 IVNS1ABPQ9Y6Y0 642 aa16.17■□□□□ 0.18
TMEM38A-202ENST00000595452 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 FOXP2O15409 715 aa16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 ORC4O43929 436 aa16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 SOX10P56693 466 aa16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 IMMTQ16891 758 aaKnown RBP16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 MFSD6Q6ZSS7 791 aa16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 CEP95Q96GE4 821 aa16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 MTMR4Q9NYA4 1195 aa16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 STX8Q9UNK0 236 aa16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 CTDP1Q9Y5B0 961 aaPredicted RBP16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 DOCK3Q8IZD9 2030 aa16.16■□□□□ 0.18
TMEM38A-202ENST00000595452 CTGFP29279 349 aa16.15■□□□□ 0.18
TMEM38A-202ENST00000595452 FLT3LGP49771 235 aa16.15■□□□□ 0.18
TMEM38A-202ENST00000595452 RRP12Q5JTH9 1297 aaKnown RBP16.15■□□□□ 0.18
TMEM38A-202ENST00000595452 WDR78Q5VTH9 848 aa16.15■□□□□ 0.18
TMEM38A-202ENST00000595452 PXYLP1Q8TE99 480 aa16.15■□□□□ 0.18
TMEM38A-202ENST00000595452 ZNF333Q96JL9 665 aa16.15■□□□□ 0.18
TMEM38A-202ENST00000595452 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
TMEM38A-202ENST00000595452 RBPJLQ9UBG7 517 aa16.15■□□□□ 0.18
TMEM38A-202ENST00000595452 ISY1Q9ULR0 285 aaKnown RBP16.15■□□□□ 0.18
TMEM38A-202ENST00000595452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.15■□□□□ 0.18
TMEM38A-202ENST00000595452 IGKV6D-41A0A0C4DH26 115 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 F5H6K3 240 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 ADCY3O60266 1144 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 DSG3P32926 999 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 COPB2P35606 906 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 CAP1Q01518 475 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 KLRC3Q07444 240 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 FAM47AQ5JRC9 791 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 AKNAD1Q5T1N1 836 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 CASC1Q6TDU7 716 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 SIAH1Q8IUQ4 282 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 TRMT44Q8IYL2 757 aaKnown RBP16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 GMCL1P1Q8NEA9 526 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 SH3TC2Q8TF17 1288 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 STAG1Q8WVM7 1258 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 ESR2Q92731 530 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 MKL1Q969V6 931 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 TXNRD2Q9NNW7 524 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 PLXNB2O15031 1838 aa16.14■□□□□ 0.17
TMEM38A-202ENST00000595452 COL11A1P12107 1806 aaPredicted RBP16.13■□□□□ 0.17
TMEM38A-202ENST00000595452 HAND2P61296 217 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms