RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 EHD4Q9H223 541 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 KBTBD13C9JR72 458 aa11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 VCAM1P19320 739 aa11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 GRIN2CQ14957 1233 aa11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 ANO1Q5XXA6 986 aa11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 ZKSCAN2Q63HK3 967 aa11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 SIAH1Q8IUQ4 282 aa11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 CRACR2BQ8N4Y2 399 aaPredicted RBP11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 MAGEB6Q8N7X4 407 aa11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 RNPC3Q96LT9 517 aaKnown RBP11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 KIAA1683Q9H0B3 1180 aa11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 IVNS1ABPQ9Y6Y0 642 aa11.87□□□□□ -0.51
NOTCH3-202ENST00000595045 SPDYE16A6NNV3 312 aaPredicted RBP11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 USP17L15C9J2P7 530 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 USP17L13C9JLJ4 530 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 USP17L11C9JVI0 530 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 USP17L18D6R9N7 530 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 USP17L22D6RA61 530 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 USP17L17D6RBQ6 530 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 USP17L19D6RCP7 530 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 USP17L20D6RJB6 530 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 ITGB8P26012 769 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 EPHB4P54760 987 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 USP17L24Q0WX57 530 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 ZYXQ15942 572 aaKnown RBP11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 CEP85Q6P2H3 762 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 TRIM34Q9BYJ4 488 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 SERPINB13Q9UIV8 391 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 TRANK1O15050 2925 aa11.86□□□□□ -0.51
NOTCH3-202ENST00000595045 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 SMIM22K7EJ46 135 aa11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 IDH1O75874 414 aaKnown RBP11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 HLA-DOAP06340 250 aa11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 ADCYAP1R1P41586 468 aa11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 TLE2Q04725 743 aa11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 OLFML2BQ68BL8 750 aa11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 FERMT2Q96AC1 680 aa11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 FEZ1Q99689 392 aa11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 ZNF236Q9UL36 1845 aa11.85□□□□□ -0.51
NOTCH3-202ENST00000595045 MYH1P12882 1939 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 TCRBV5S4A2TA0A5A2 114 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 SEPT4O43236 478 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 COBLO75128 1261 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 DNAJB2P25686 324 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 ADORA2AP29274 412 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 PLA2G5P39877 138 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 SEPT2Q15019 361 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 LRRC41Q15345 812 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 ABCB5Q2M3G0 1257 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 SLFNL1Q499Z3 407 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 CERKLQ49MI3 558 aaPredicted RBP11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 C1orf53Q5VUE5 145 aa11.84□□□□□ -0.51
NOTCH3-202ENST00000595045 CYP2D6P10635 497 aa11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 OS9Q13438 667 aaPredicted RBP11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 RAB3GAP1Q15042 981 aa11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 DPP9Q86TI2 863 aa11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 SIRT2Q8IXJ6 389 aa11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 MOV10L1Q9BXT6 1211 aaKnown RBP11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 ZNF576Q9H609 170 aa11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 RPAP3Q9H6T3 665 aaPredicted RBP11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 EXOC6BQ9Y2D4 811 aa11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 TACC3Q9Y6A5 838 aa11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 ZNFX1Q9P2E3 1918 aaKnown RBP11.83□□□□□ -0.52
NOTCH3-202ENST00000595045 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 KIAA0355O15063 1070 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 CHGBP05060 677 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 CLTBP09497 229 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 PDE6AP16499 860 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 USP5P45974 858 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 USP14P54578 494 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 FAM47AQ5JRC9 791 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 PRAMEF19Q5SWL8 479 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 TTC6Q86TZ1 520 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 SLC44A5Q8NCS7 719 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 ATXN2LQ8WWM7 1075 aaKnown RBP11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 FAM122AQ96E09 287 aa11.82□□□□□ -0.52
NOTCH3-202ENST00000595045 PLXNA1Q9UIW2 1896 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 STRNO43815 780 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 RAG1P15918 1043 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 FPGSQ05932 587 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 MAP3K12Q12852 859 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 TMED8Q6PL24 325 aaPredicted RBP11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 AACSQ86V21 672 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 CERS3Q8IU89 383 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 CLEC10AQ8IUN9 316 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 ITPRIPQ8IWB1 547 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 ADAMTS19Q8TE59 1207 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 PPM1EQ8WY54 764 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 TIFAQ96CG3 184 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 ASB2Q96Q27 587 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 IL1RAPL2Q9NP60 686 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 DCP1AQ9NPI6 582 aaPredicted RBP11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 PHF24Q9UPV7 400 aa11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 TCF20Q9UGU0 1960 aaKnown RBP11.81□□□□□ -0.52
NOTCH3-202ENST00000595045 MAGEB6P1A0A0J9YX57 407 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 PRKAB2O43741 272 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 PQBP1O60828 265 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms