RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ZNF446Q9NWS9 450 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 CLIP2Q9UDT6 1046 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 ZNF202O95125 648 aa19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 TOB1P50616 345 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 TMTC3Q6ZXV5 915 aa19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 FOXP1Q9H334 677 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 ATP6V0A2Q9Y487 856 aa19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 KIAA1551Q9HCM1 1747 aa19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 RAD51AP2Q09MP3 1159 aa19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 STX1AQ16623 288 aa19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 TEX35Q5T0J7 233 aa19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 RCSD1Q6JBY9 416 aa19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 TEX11Q8IYF3 940 aa19.5■□□□□ 0.71
SHKBP1-205ENST00000594973 LAMB1P07942 1786 aa19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 USP17L3A6NCW0 530 aa19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 USP17L4A6NCW7 530 aa19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 PRPF3O43395 683 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 PPP6R2O75170 966 aa19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 XBP1P17861 261 aa19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 USP17L1Q7RTZ2 530 aa19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 LRRC8AQ8IWT6 810 aa19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 SRBD1Q8N5C6 995 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 YY1AP1Q9H869 796 aa19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 IL17RBQ9NRM6 502 aa19.49■□□□□ 0.71
SHKBP1-205ENST00000594973 F8W031 263 aaPredicted RBP19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 HMGB2P26583 209 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 SHC4Q6S5L8 630 aa19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 TXLNBQ8N3L3 684 aa19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 KAT14Q9H8E8 782 aa19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 CABP5Q9NP86 173 aa19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 PARP3Q9Y6F1 533 aa19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 GPR75-ASB3A0A0A6YYF3 556 aa19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 TSPY3P0CV98 308 aa19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 TSPY8P0CW00 308 aa19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 TMC4Q7Z404 712 aa19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 MTMR7Q9Y216 660 aa19.48■□□□□ 0.71
SHKBP1-205ENST00000594973 NPR1P16066 1061 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 SARM1Q6SZW1 724 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 ZNF444Q8N0Y2 327 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 TBC1D22AQ8WUA7 517 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 ZC3H12CQ9C0D7 883 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 ST7Q9NRC1 585 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 FHOD1Q9Y613 1164 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 FAM205CA6NFA0 338 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 SYKP43405 635 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 DOK7Q18PE1 504 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 RILPL1Q5EBL4 403 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 SPECC1Q5M775 1068 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 PCDHB6Q9Y5E3 794 aa19.47■□□□□ 0.71
SHKBP1-205ENST00000594973 BAZ2BQ9UIF8 2168 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 DPP8Q6V1X1 898 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 STX8Q9UNK0 236 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 CNTNAP5Q8WYK1 1306 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 RXRBP28702 533 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 PDE6BP35913 854 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 TPM4P67936 248 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 CCDC144BQ3MJ40 725 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 PNMA1Q8ND90 353 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 ZNF622Q969S3 477 aaKnown RBP eCLIP19.46■□□□□ 0.712e-8■□□□□ 10.5
SHKBP1-205ENST00000594973 MRFAP1L1Q96HT8 127 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 PHF20Q9BVI0 1012 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 MXD3Q9BW11 206 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 L2HGDHQ9H9P8 463 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 ANO10Q9NW15 660 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 KIAA1468Q9P260 1216 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 FLT1P17948 1338 aa19.46■□□□□ 0.71
SHKBP1-205ENST00000594973 BIN1O00499 593 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 KRT2P35908 639 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 RHBDL3P58872 404 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 ZRSR1Q15695 479 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 KRI1Q8N9T8 703 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 COA1Q9GZY4 146 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 ANKRD31Q8N7Z5 1873 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 GOLGA6L19H0YKK7 550 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 CUTAO60888 179 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 ALDH1B1P30837 517 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 EARS2Q5JPH6 523 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 DGKHQ86XP1 1220 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 SLF2Q8IX21 1173 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 FLAD1Q8NFF5 587 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 ROBO3Q96MS0 1386 aa19.45■□□□□ 0.7
SHKBP1-205ENST00000594973 VEGFAP15692 232 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-205ENST00000594973 PLCG2P16885 1265 aa19.44■□□□□ 0.7
SHKBP1-205ENST00000594973 GRIN1Q05586 938 aa19.44■□□□□ 0.7
SHKBP1-205ENST00000594973 IQCB1Q15051 598 aa19.44■□□□□ 0.7
SHKBP1-205ENST00000594973 RESP18Q5W5W9 173 aa19.44■□□□□ 0.7
SHKBP1-205ENST00000594973 CERS3Q8IU89 383 aa19.44■□□□□ 0.7
SHKBP1-205ENST00000594973 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.44■□□□□ 0.7
SHKBP1-205ENST00000594973 HPSEQ9Y251 543 aa19.44■□□□□ 0.7
SHKBP1-205ENST00000594973 V9GYY5 206 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-205ENST00000594973 FAM205AQ6ZU69 1335 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 TUBB4AP04350 444 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 RASA1P20936 1047 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 KIF5BP33176 963 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 MAPK8IP2Q13387 824 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 PICALMQ13492 652 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 STAG2Q8N3U4 1231 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 TMX4Q9H1E5 349 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 RASSF4Q9H2L5 321 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms