RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 GRB14Q14449 540 aa17.83■□□□□ 0.44
PNKP-202ENST00000593706 LRRC26Q2I0M4 334 aa17.83■□□□□ 0.44
PNKP-202ENST00000593706 SIRT2Q8IXJ6 389 aa17.83■□□□□ 0.44
PNKP-202ENST00000593706 CLASRPQ8N2M8 674 aaKnown RBP17.83■□□□□ 0.44
PNKP-202ENST00000593706 SLC17A8Q8NDX2 589 aa17.83■□□□□ 0.44
PNKP-202ENST00000593706 FLRT1Q9NZU1 646 aa17.83■□□□□ 0.44
PNKP-202ENST00000593706 DDX19BQ9UMR2 479 aa17.83■□□□□ 0.44
PNKP-202ENST00000593706 EYSQ5T1H1 3165 aa17.82■□□□□ 0.44
PNKP-202ENST00000593706 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
PNKP-202ENST00000593706 SDR42E1Q8WUS8 393 aa17.82■□□□□ 0.44
PNKP-202ENST00000593706 MSCO60682 206 aa17.81■□□□□ 0.44
PNKP-202ENST00000593706 GUCY1A2P33402 732 aa17.81■□□□□ 0.44
PNKP-202ENST00000593706 GABPAQ06546 454 aa17.81■□□□□ 0.44
PNKP-202ENST00000593706 LRIT3Q3SXY7 679 aa17.81■□□□□ 0.44
PNKP-202ENST00000593706 GPR153Q6NV75 609 aa17.81■□□□□ 0.44
PNKP-202ENST00000593706 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
PNKP-202ENST00000593706 DEFB123Q8N688 67 aa17.81■□□□□ 0.44
PNKP-202ENST00000593706 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
PNKP-202ENST00000593706 DDX20Q9UHI6 824 aaKnown RBP17.81■□□□□ 0.44
PNKP-202ENST00000593706 CDH23Q9H251 3354 aa17.8■□□□□ 0.44
PNKP-202ENST00000593706 HMMRO75330 724 aa17.8■□□□□ 0.44
PNKP-202ENST00000593706 HOXC6P09630 235 aa17.8■□□□□ 0.44
PNKP-202ENST00000593706 CYP2C19P33261 490 aa17.8■□□□□ 0.44
PNKP-202ENST00000593706 MDM2Q00987 491 aaPredicted RBP17.8■□□□□ 0.44
PNKP-202ENST00000593706 EVX2Q03828 476 aa17.8■□□□□ 0.44
PNKP-202ENST00000593706 TMEM179Q6ZVK1 233 aa17.8■□□□□ 0.44
PNKP-202ENST00000593706 DPP9Q86TI2 863 aa17.8■□□□□ 0.44
PNKP-202ENST00000593706 NPLOC4Q8TAT6 608 aa17.8■□□□□ 0.44
PNKP-202ENST00000593706 SENP6Q9GZR1 1112 aaPredicted RBP17.8■□□□□ 0.44
PNKP-202ENST00000593706 DCP1AQ9NPI6 582 aaPredicted RBP17.8■□□□□ 0.44
PNKP-202ENST00000593706 GREB1LQ9C091 1923 aaPredicted RBP17.79■□□□□ 0.44
PNKP-202ENST00000593706 A0A1W2PRG0 241 aa17.79■□□□□ 0.44
PNKP-202ENST00000593706 COG2Q14746 738 aa17.79■□□□□ 0.44
PNKP-202ENST00000593706 Q7L0L9 218 aa17.79■□□□□ 0.44
PNKP-202ENST00000593706 SLC44A5Q8NCS7 719 aa17.79■□□□□ 0.44
PNKP-202ENST00000593706 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.79■□□□□ 0.44
PNKP-202ENST00000593706 LPAR1Q92633 364 aa17.79■□□□□ 0.44
PNKP-202ENST00000593706 MOV10L1Q9BXT6 1211 aaKnown RBP17.79■□□□□ 0.44
PNKP-202ENST00000593706 ARMT1Q9H993 441 aa17.79■□□□□ 0.44
PNKP-202ENST00000593706 ARHGEF10LQ9HCE6 1279 aa17.79■□□□□ 0.44
PNKP-202ENST00000593706 HOXC10Q9NYD6 342 aa17.79■□□□□ 0.44
PNKP-202ENST00000593706 SWAP70Q9UH65 585 aa17.79■□□□□ 0.44
PNKP-202ENST00000593706 TCRBV5S4A2TA0A5A2 114 aa17.78■□□□□ 0.44
PNKP-202ENST00000593706 CYP2D6P10635 497 aa17.78■□□□□ 0.44
PNKP-202ENST00000593706 ADORA2AP29274 412 aa17.78■□□□□ 0.44
PNKP-202ENST00000593706 PLS1Q14651 629 aa17.78■□□□□ 0.44
PNKP-202ENST00000593706 SAMD1Q6SPF0 538 aaPredicted RBP17.78■□□□□ 0.44
PNKP-202ENST00000593706 RPAP2Q8IXW5 612 aaPredicted RBP17.78■□□□□ 0.44
PNKP-202ENST00000593706 AMOTL1Q8IY63 956 aa17.78■□□□□ 0.44
PNKP-202ENST00000593706 LBHD1Q9BQE6 289 aaPredicted RBP17.78■□□□□ 0.44
PNKP-202ENST00000593706 SPATC1LQ9H0A9 340 aa17.78■□□□□ 0.44
PNKP-202ENST00000593706 SH2D4AQ9H788 454 aa17.78■□□□□ 0.44
PNKP-202ENST00000593706 MCM3APO60318 1980 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 DNM1LO00429 736 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 STRNO43815 780 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 FLOT1O75955 427 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 MBD4O95243 580 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 CYBAP13498 195 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 ATN1P54259 1190 aaPredicted RBP17.77■□□□□ 0.44
PNKP-202ENST00000593706 ICA1Q05084 483 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 CLEC10AQ8IUN9 316 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 MB21D1Q8N884 522 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.77■□□□□ 0.443e-8■■■■□ 20.3
PNKP-202ENST00000593706 PAG1Q9NWQ8 432 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 PRKAG2Q9UGJ0 569 aa17.77■□□□□ 0.44
PNKP-202ENST00000593706 KBTBD13C9JR72 458 aa17.76■□□□□ 0.43
PNKP-202ENST00000593706 DLL1O00548 723 aa17.76■□□□□ 0.43
PNKP-202ENST00000593706 MYCNP04198 464 aaPredicted RBP17.76■□□□□ 0.43
PNKP-202ENST00000593706 ERCC3P19447 782 aa17.76■□□□□ 0.43
PNKP-202ENST00000593706 NCAPG2Q86XI2 1143 aa17.76■□□□□ 0.43
PNKP-202ENST00000593706 SPICE1Q8N0Z3 855 aa17.76■□□□□ 0.43
PNKP-202ENST00000593706 SHCBP1Q8NEM2 672 aa17.76■□□□□ 0.43
PNKP-202ENST00000593706 TRPV1Q8NER1 839 aa17.76■□□□□ 0.43
PNKP-202ENST00000593706 DYNLL2Q96FJ2 89 aa17.76■□□□□ 0.43
PNKP-202ENST00000593706 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
PNKP-202ENST00000593706 SLC5A4Q9NY91 659 aa17.76■□□□□ 0.43
PNKP-202ENST00000593706 AKR1B1P15121 316 aa17.75■□□□□ 0.43
PNKP-202ENST00000593706 GJC2Q5T442 439 aaPredicted RBP17.75■□□□□ 0.43
PNKP-202ENST00000593706 OLFML2BQ68BL8 750 aa17.75■□□□□ 0.43
PNKP-202ENST00000593706 BOLA2Q9H3K6 86 aa17.75■□□□□ 0.43
PNKP-202ENST00000593706 MROH8Q9H579 483 aa17.75■□□□□ 0.43
PNKP-202ENST00000593706 ATP8A2Q9NTI2 1148 aa17.75■□□□□ 0.43
PNKP-202ENST00000593706 PRKAB2O43741 272 aa17.74■□□□□ 0.43
PNKP-202ENST00000593706 RAB11FIP3O75154 756 aa17.74■□□□□ 0.43
PNKP-202ENST00000593706 ADD2P35612 726 aa17.74■□□□□ 0.43
PNKP-202ENST00000593706 RTP1P59025 263 aa17.74■□□□□ 0.43
PNKP-202ENST00000593706 KIAA1755Q5JYT7 1200 aa17.74■□□□□ 0.43
PNKP-202ENST00000593706 ANO1Q5XXA6 986 aa17.74■□□□□ 0.43
PNKP-202ENST00000593706 ARRDC4Q8NCT1 418 aa17.74■□□□□ 0.43
PNKP-202ENST00000593706 ATG4CQ96DT6 458 aa17.74■□□□□ 0.43
PNKP-202ENST00000593706 VCPKMTQ9H867 229 aa17.74■□□□□ 0.43
PNKP-202ENST00000593706 ATP11BQ9Y2G3 1177 aa17.74■□□□□ 0.43
PNKP-202ENST00000593706 VCANP13611 3396 aa17.73■□□□□ 0.43
PNKP-202ENST00000593706 WDR46O15213 610 aaKnown RBP17.73■□□□□ 0.43
PNKP-202ENST00000593706 DSG3P32926 999 aa17.73■□□□□ 0.43
PNKP-202ENST00000593706 SLFNL1Q499Z3 407 aa17.73■□□□□ 0.43
PNKP-202ENST00000593706 CCDC17Q96LX7 622 aa17.73■□□□□ 0.43
PNKP-202ENST00000593706 CHMP4BQ9H444 224 aaKnown RBP17.73■□□□□ 0.43
PNKP-202ENST00000593706 TMX2Q9Y320 296 aa17.73■□□□□ 0.43
PNKP-202ENST00000593706 PRUNE2Q8WUY3 3088 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms