RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 LRRC10BA6NIK2 292 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 HSP90AA4PQ58FG1 418 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 ADGRG1Q9Y653 693 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 MINDY4BA8MYZ0 360 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 MFAP3LO75121 409 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 PLEKHA8P1O95397 391 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 PPP2R3AQ06190 1150 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 TUBB2AQ13885 445 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 RASGRP2Q7LDG7 609 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 IQCA1Q86XH1 822 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 TUBB2BQ9BVA1 445 aa13.19□□□□□ -0.3
ZNF540-210ENST00000592533 MRPL44Q9H9J2 332 aaKnown RBP13.19□□□□□ -0.3
ZNF540-210ENST00000592533 RGL2O15211 777 aa13.18□□□□□ -0.3
ZNF540-210ENST00000592533 TEX33O43247 280 aa13.18□□□□□ -0.3
ZNF540-210ENST00000592533 SF3B3Q15393 1217 aaKnown RBP13.18□□□□□ -0.3
ZNF540-210ENST00000592533 TTC38Q5R3I4 469 aa13.18□□□□□ -0.3
ZNF540-210ENST00000592533 LIMA1Q9UHB6 759 aaKnown RBP13.18□□□□□ -0.3
ZNF540-210ENST00000592533 WNT7AO00755 349 aa13.18□□□□□ -0.3
ZNF540-210ENST00000592533 NT5C2P49902 561 aa13.18□□□□□ -0.3
ZNF540-210ENST00000592533 IGSF22Q8N9C0 903 aa13.18□□□□□ -0.3
ZNF540-210ENST00000592533 ZNF384Q8TF68 577 aa13.18□□□□□ -0.3
ZNF540-210ENST00000592533 BSDC1Q9NW68 430 aaPredicted RBP13.18□□□□□ -0.3
ZNF540-210ENST00000592533 NIP7Q9Y221 180 aaKnown RBP eCLIP13.18□□□□□ -0.3
ZNF540-210ENST00000592533 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
ZNF540-210ENST00000592533 XDHP47989 1333 aa13.18□□□□□ -0.3
ZNF540-210ENST00000592533 IGSF3O75054 1194 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 RBL2Q08999 1139 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 JAKMIP3Q5VZ66 844 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 PDXDC2PQ6P474 469 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 CNGA4Q8IV77 575 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 CC2D1AQ6P1N0 951 aaPredicted RBP13.17□□□□□ -0.3
ZNF540-210ENST00000592533 CLEC4GQ6UXB4 293 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 RAD9BQ6WBX8 426 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 PPFIBP1Q86W92 1011 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 SOWAHDA6NJG2 315 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 SMIM22K7EJ46 135 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 SIK1P57059 783 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 TUBB4BP68371 445 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 FILIP1LQ4L180 1135 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 GOLGA1Q92805 767 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 RWDD2AQ9UIY3 292 aa13.17□□□□□ -0.3
ZNF540-210ENST00000592533 PRDM1O75626 825 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 TBC1D8O95759 1140 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 AFMP43652 599 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 ITPK1Q13572 414 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 MTF1Q14872 753 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 ARL6IP4Q66PJ3 421 aaKnown RBP13.16□□□□□ -0.3
ZNF540-210ENST00000592533 IQUBQ8NA54 791 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 DESI2Q9BSY9 194 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 ST7Q9NRC1 585 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 ABCF2Q9UG63 623 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 IQSEC3Q9UPP2 1182 aaPredicted RBP13.16□□□□□ -0.3
ZNF540-210ENST00000592533 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
ZNF540-210ENST00000592533 GYPCP04921 128 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 GYG1P46976 350 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 SPAG1Q07617 926 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 PTGDRQ13258 359 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 TRIM14Q14142 442 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
ZNF540-210ENST00000592533 THRAP3Q9Y2W1 955 aaKnown RBP13.16□□□□□ -0.3
ZNF540-210ENST00000592533 SEMA3FQ13275 785 aa13.15□□□□□ -0.3
ZNF540-210ENST00000592533 PFKFB3Q16875 520 aaPredicted RBP13.15□□□□□ -0.3
ZNF540-210ENST00000592533 SBK1Q52WX2 424 aa13.15□□□□□ -0.3
ZNF540-210ENST00000592533 FBXO33Q7Z6M2 555 aa13.15□□□□□ -0.3
ZNF540-210ENST00000592533 SRBD1Q8N5C6 995 aaKnown RBP13.15□□□□□ -0.3
ZNF540-210ENST00000592533 SCG2P13521 617 aa13.15□□□□□ -0.3
ZNF540-210ENST00000592533 TXLNAP40222 546 aa13.15□□□□□ -0.3
ZNF540-210ENST00000592533 DYNLL1P63167 89 aaKnown RBP13.15□□□□□ -0.3
ZNF540-210ENST00000592533 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
ZNF540-210ENST00000592533 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
ZNF540-210ENST00000592533 TTF2Q9UNY4 1162 aaKnown RBP13.15□□□□□ -0.3
ZNF540-210ENST00000592533 CYP2C19P33261 490 aa13.15□□□□□ -0.31
ZNF540-210ENST00000592533 ZNF174Q15697 407 aa13.15□□□□□ -0.31
ZNF540-210ENST00000592533 SRGAP1Q7Z6B7 1085 aa13.15□□□□□ -0.31
ZNF540-210ENST00000592533 FAM177A1Q8N128 213 aaPredicted RBP13.15□□□□□ -0.31
ZNF540-210ENST00000592533 CCDC12Q8WUD4 166 aaPredicted RBP13.15□□□□□ -0.31
ZNF540-210ENST00000592533 NSUN4Q96CB9 384 aaKnown RBP13.15□□□□□ -0.31
ZNF540-210ENST00000592533 SH3GLB2Q9NR46 395 aa13.15□□□□□ -0.31
ZNF540-210ENST00000592533 MYO1AQ9UBC5 1043 aa13.15□□□□□ -0.31
ZNF540-210ENST00000592533 CCDC151A5D8V7 595 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 BRD3Q15059 726 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
ZNF540-210ENST00000592533 TMTC1Q8IUR5 882 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 MSL3Q8N5Y2 521 aaKnown RBP13.14□□□□□ -0.31
ZNF540-210ENST00000592533 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
ZNF540-210ENST00000592533 HNRNPLLQ8WVV9 542 aaKnown RBP13.14□□□□□ -0.31
ZNF540-210ENST00000592533 MTRQ99707 1265 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 ATP8A2Q9NTI2 1148 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 RMND1Q9NWS8 449 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 BAZ2BQ9UIF8 2168 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms