RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 C11orf49Q9H6J7 331 aa22.7■■□□□ 1.22
CCDC43-205ENST00000592333 BTBD7Q9P203 1132 aa22.7■■□□□ 1.22
CCDC43-205ENST00000592333 RANBP2P49792 3224 aaKnown RBP22.69■■□□□ 1.22
CCDC43-205ENST00000592333 MSCO60682 206 aa22.69■■□□□ 1.22
CCDC43-205ENST00000592333 GIMAP6Q6P9H5 292 aa22.69■■□□□ 1.22
CCDC43-205ENST00000592333 C16orf86Q6ZW13 317 aa22.69■■□□□ 1.22
CCDC43-205ENST00000592333 DIS3LQ8TF46 1054 aaKnown RBP22.69■■□□□ 1.22
CCDC43-205ENST00000592333 DCTPP1Q9H773 170 aa22.69■■□□□ 1.22
CCDC43-205ENST00000592333 USP17L12C9JPN9 530 aa22.68■■□□□ 1.22
CCDC43-205ENST00000592333 USP17L21D6R901 530 aa22.68■■□□□ 1.22
CCDC43-205ENST00000592333 PRKAB2O43741 272 aa22.68■■□□□ 1.22
CCDC43-205ENST00000592333 CDK8P49336 464 aa22.68■■□□□ 1.22
CCDC43-205ENST00000592333 C20orf194Q5TEA3 1177 aa22.68■■□□□ 1.22
CCDC43-205ENST00000592333 LHX8Q68G74 356 aa22.68■■□□□ 1.22
CCDC43-205ENST00000592333 GPATCH3Q96I76 525 aa22.68■■□□□ 1.22
CCDC43-205ENST00000592333 KANSL2Q9H9L4 492 aa22.68■■□□□ 1.22
CCDC43-205ENST00000592333 ARPP21Q9UBL0 812 aaPredicted RBP22.68■■□□□ 1.22
CCDC43-205ENST00000592333 MYH7P12883 1935 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 WDR46O15213 610 aaKnown RBP22.67■■□□□ 1.22
CCDC43-205ENST00000592333 CYP2D6P10635 497 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 COL6A1P12109 1028 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 BMP8BP34820 402 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 EVX2Q03828 476 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 ICA1Q05084 483 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 CCL14Q16627 93 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 SIAH1Q8IUQ4 282 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 SLC44A5Q8NCS7 719 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 DYNLL2Q96FJ2 89 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 TANGO6Q9C0B7 1094 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 VCPKMTQ9H867 229 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 SLC4A4Q9Y6R1 1079 aa22.67■■□□□ 1.22
CCDC43-205ENST00000592333 IGHA2P01877 340 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 ZFYP08048 801 aaPredicted RBP22.66■■□□□ 1.22
CCDC43-205ENST00000592333 DSG3P32926 999 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 ATP2B2Q01814 1243 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 SBK1Q52WX2 424 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 WDR78Q5VTH9 848 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 ABRAQ8N0Z2 381 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 SPATC1LQ9H0A9 340 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 BCL11AQ9H165 835 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 MROH8Q9H579 483 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 SLC5A4Q9NY91 659 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 MYH8P13535 1937 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 ZNF236Q9UL36 1845 aa22.66■■□□□ 1.22
CCDC43-205ENST00000592333 AKR1B1P15121 316 aa22.65■■□□□ 1.22
CCDC43-205ENST00000592333 LRRFIP1Q32MZ4 808 aaKnown RBP22.65■■□□□ 1.22
CCDC43-205ENST00000592333 OLFML2BQ68BL8 750 aa22.65■■□□□ 1.22
CCDC43-205ENST00000592333 CTR9Q6PD62 1173 aa22.65■■□□□ 1.22
CCDC43-205ENST00000592333 KBTBD3Q8NAB2 608 aa22.65■■□□□ 1.22
CCDC43-205ENST00000592333 MOV10L1Q9BXT6 1211 aaKnown RBP22.65■■□□□ 1.22
CCDC43-205ENST00000592333 PUS7LQ9H0K6 701 aaKnown RBP22.65■■□□□ 1.22
CCDC43-205ENST00000592333 A0A0G2JMZ2 1700 aa22.65■■□□□ 1.22
CCDC43-205ENST00000592333 CCND3P30281 292 aaPredicted RBP22.64■■□□□ 1.21
CCDC43-205ENST00000592333 STRBPQ96SI9 672 aaKnown RBP22.64■■□□□ 1.21
CCDC43-205ENST00000592333 ADAMTS5Q9UNA0 930 aa22.64■■□□□ 1.21
CCDC43-205ENST00000592333 RLFQ13129 1914 aa22.63■■□□□ 1.21
CCDC43-205ENST00000592333 ALPK3Q96L96 1907 aa22.63■■□□□ 1.21
CCDC43-205ENST00000592333 SMARCA5O60264 1052 aaPredicted RBP22.63■■□□□ 1.21
CCDC43-205ENST00000592333 FLOT1O75955 427 aa22.63■■□□□ 1.21
CCDC43-205ENST00000592333 SLC25A27O95847 323 aa22.63■■□□□ 1.21
CCDC43-205ENST00000592333 SLFNL1Q499Z3 407 aa22.63■■□□□ 1.21
CCDC43-205ENST00000592333 DPP9Q86TI2 863 aa22.63■■□□□ 1.21
CCDC43-205ENST00000592333 GDF15Q99988 308 aa22.63■■□□□ 1.21
CCDC43-205ENST00000592333 FLRT1Q9NZU1 646 aa22.63■■□□□ 1.21
CCDC43-205ENST00000592333 BAZ2AQ9UIF9 1905 aaKnown RBP22.63■■□□□ 1.21
CCDC43-205ENST00000592333 PFASO15067 1338 aa22.62■■□□□ 1.21
CCDC43-205ENST00000592333 GNAT2P19087 354 aa22.62■■□□□ 1.21
CCDC43-205ENST00000592333 APPBP2Q92624 585 aa22.62■■□□□ 1.21
CCDC43-205ENST00000592333 GOPCQ9HD26 462 aa22.62■■□□□ 1.21
CCDC43-205ENST00000592333 DDX20Q9UHI6 824 aaKnown RBP22.62■■□□□ 1.21
CCDC43-205ENST00000592333 TTC41PQ6P2S7 1318 aa22.61■■□□□ 1.21
CCDC43-205ENST00000592333 EEF2P13639 858 aaKnown RBP22.61■■□□□ 1.21
CCDC43-205ENST00000592333 ERCC3P19447 782 aa22.61■■□□□ 1.21
CCDC43-205ENST00000592333 ADORA2AP29274 412 aa22.61■■□□□ 1.21
CCDC43-205ENST00000592333 KIAA1755Q5JYT7 1200 aa22.61■■□□□ 1.21
CCDC43-205ENST00000592333 C7orf61Q8IZ16 206 aa22.61■■□□□ 1.21
CCDC43-205ENST00000592333 NPLOC4Q8TAT6 608 aa22.61■■□□□ 1.21
CCDC43-205ENST00000592333 ZNF287Q9HBT7 754 aa22.61■■□□□ 1.21
CCDC43-205ENST00000592333 CYP2D7A0A087X1C5 515 aa22.6■■□□□ 1.21
CCDC43-205ENST00000592333 RNF113AO15541 343 aaKnown RBP22.6■■□□□ 1.21
CCDC43-205ENST00000592333 COPB2P35606 906 aa22.6■■□□□ 1.21
CCDC43-205ENST00000592333 STAP2Q9UGK3 403 aa22.6■■□□□ 1.21
CCDC43-205ENST00000592333 ROBO3Q96MS0 1386 aa22.6■■□□□ 1.21
CCDC43-205ENST00000592333 GSG1L2A8MUP6 293 aa22.59■■□□□ 1.21
CCDC43-205ENST00000592333 ERC2O15083 957 aa22.59■■□□□ 1.21
CCDC43-205ENST00000592333 CYBAP13498 195 aa22.59■■□□□ 1.21
CCDC43-205ENST00000592333 SPICE1Q8N0Z3 855 aa22.59■■□□□ 1.21
CCDC43-205ENST00000592333 SYNPO2Q9UMS6 1093 aa22.59■■□□□ 1.21
CCDC43-205ENST00000592333 DNM1LO00429 736 aa22.58■■□□□ 1.21
CCDC43-205ENST00000592333 CHGBP05060 677 aa22.58■■□□□ 1.21
CCDC43-205ENST00000592333 FCER1AP12319 257 aa22.58■■□□□ 1.21
CCDC43-205ENST00000592333 GPR153Q6NV75 609 aa22.58■■□□□ 1.21
CCDC43-205ENST00000592333 OSBP2Q969R2 916 aa22.58■■□□□ 1.21
CCDC43-205ENST00000592333 ATG4CQ96DT6 458 aa22.58■■□□□ 1.21
CCDC43-205ENST00000592333 NYAP2Q9P242 653 aa22.58■■□□□ 1.21
CCDC43-205ENST00000592333 NRBP1Q9UHY1 535 aa22.58■■□□□ 1.21
CCDC43-205ENST00000592333 CYP2C19P33261 490 aa22.57■■□□□ 1.2
CCDC43-205ENST00000592333 RIOX2Q8IUF8 465 aa22.57■■□□□ 1.2
CCDC43-205ENST00000592333 CLEC10AQ8IUN9 316 aa22.57■■□□□ 1.2
CCDC43-205ENST00000592333 ARRDC4Q8NCT1 418 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms