RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 PAWRQ96IZ0 340 aaKnown RBP23.66■■□□□ 1.38
TNFRSF11A-204ENST00000592013 TTC41PQ6P2S7 1318 aa23.65■■□□□ 1.38
TNFRSF11A-204ENST00000592013 MYH7P12883 1935 aa23.65■■□□□ 1.38
TNFRSF11A-204ENST00000592013 SPDYE16A6NNV3 312 aaPredicted RBP23.65■■□□□ 1.38
TNFRSF11A-204ENST00000592013 PRKAB2O43741 272 aa23.65■■□□□ 1.38
TNFRSF11A-204ENST00000592013 SMARCA5O60264 1052 aaPredicted RBP23.65■■□□□ 1.38
TNFRSF11A-204ENST00000592013 PTPREP23469 700 aa23.65■■□□□ 1.38
TNFRSF11A-204ENST00000592013 CDK8P49336 464 aa23.65■■□□□ 1.38
TNFRSF11A-204ENST00000592013 SHCBP1Q8NEM2 672 aa23.65■■□□□ 1.38
TNFRSF11A-204ENST00000592013 GOPCQ9HD26 462 aa23.65■■□□□ 1.38
TNFRSF11A-204ENST00000592013 OGDHLQ9ULD0 1010 aa23.65■■□□□ 1.38
TNFRSF11A-204ENST00000592013 WDR46O15213 610 aaKnown RBP23.64■■□□□ 1.37
TNFRSF11A-204ENST00000592013 CYP2D6P10635 497 aa23.64■■□□□ 1.37
TNFRSF11A-204ENST00000592013 ATP2B2Q01814 1243 aa23.64■■□□□ 1.37
TNFRSF11A-204ENST00000592013 APPBP2Q92624 585 aa23.64■■□□□ 1.37
TNFRSF11A-204ENST00000592013 MROH8Q9H579 483 aa23.64■■□□□ 1.37
TNFRSF11A-204ENST00000592013 VCPKMTQ9H867 229 aa23.64■■□□□ 1.37
TNFRSF11A-204ENST00000592013 MYH8P13535 1937 aa23.64■■□□□ 1.37
TNFRSF11A-204ENST00000592013 A0A1W2PPC1 479 aa23.63■■□□□ 1.37
TNFRSF11A-204ENST00000592013 FLOT1O75955 427 aa23.63■■□□□ 1.37
TNFRSF11A-204ENST00000592013 HOXC6P09630 235 aa23.63■■□□□ 1.37
TNFRSF11A-204ENST00000592013 SBK1Q52WX2 424 aa23.63■■□□□ 1.37
TNFRSF11A-204ENST00000592013 SLC44A5Q8NCS7 719 aa23.63■■□□□ 1.37
TNFRSF11A-204ENST00000592013 DYNLL2Q96FJ2 89 aa23.63■■□□□ 1.37
TNFRSF11A-204ENST00000592013 NACAP1Q9BZK3 213 aa23.63■■□□□ 1.37
TNFRSF11A-204ENST00000592013 C11orf49Q9H6J7 331 aa23.63■■□□□ 1.37
TNFRSF11A-204ENST00000592013 A0A1W2PRG0 241 aa23.62■■□□□ 1.37
TNFRSF11A-204ENST00000592013 RNF113AO15541 343 aaKnown RBP23.62■■□□□ 1.37
TNFRSF11A-204ENST00000592013 CNMDO75829 334 aa23.62■■□□□ 1.37
TNFRSF11A-204ENST00000592013 CACNB2Q08289 660 aaPredicted RBP23.62■■□□□ 1.37
TNFRSF11A-204ENST00000592013 GRB14Q14449 540 aa23.62■■□□□ 1.37
TNFRSF11A-204ENST00000592013 CHRDL2Q6WN34 429 aa23.62■■□□□ 1.37
TNFRSF11A-204ENST00000592013 DPP9Q86TI2 863 aa23.62■■□□□ 1.37
TNFRSF11A-204ENST00000592013 STRBPQ96SI9 672 aaKnown RBP23.62■■□□□ 1.37
TNFRSF11A-204ENST00000592013 PUS7LQ9H0K6 701 aaKnown RBP23.62■■□□□ 1.37
TNFRSF11A-204ENST00000592013 MKNK2Q9HBH9 465 aa23.62■■□□□ 1.37
TNFRSF11A-204ENST00000592013 PLXNB2O15031 1838 aa23.61■■□□□ 1.37
TNFRSF11A-204ENST00000592013 SLC25A27O95847 323 aa23.61■■□□□ 1.37
TNFRSF11A-204ENST00000592013 AKR1B1P15121 316 aa23.61■■□□□ 1.37
TNFRSF11A-204ENST00000592013 COPB2P35606 906 aa23.61■■□□□ 1.37
TNFRSF11A-204ENST00000592013 CTR9Q6PD62 1173 aa23.61■■□□□ 1.37
TNFRSF11A-204ENST00000592013 ABRAQ8N0Z2 381 aa23.61■■□□□ 1.37
TNFRSF11A-204ENST00000592013 SPATC1LQ9H0A9 340 aa23.61■■□□□ 1.37
TNFRSF11A-204ENST00000592013 BTBD7Q9P203 1132 aa23.61■■□□□ 1.37
TNFRSF11A-204ENST00000592013 SLC3A2P08195 630 aaKnown RBP23.6■■□□□ 1.37
TNFRSF11A-204ENST00000592013 DSG3P32926 999 aa23.6■■□□□ 1.37
TNFRSF11A-204ENST00000592013 TRIM32Q13049 653 aa23.6■■□□□ 1.37
TNFRSF11A-204ENST00000592013 PEX10O60683 326 aa23.59■■□□□ 1.37
TNFRSF11A-204ENST00000592013 TDO2P48775 406 aa23.59■■□□□ 1.37
TNFRSF11A-204ENST00000592013 APPP05067 770 aa23.58■■□□□ 1.37
TNFRSF11A-204ENST00000592013 EEF2P13639 858 aaKnown RBP23.58■■□□□ 1.37
TNFRSF11A-204ENST00000592013 FXR1P51114 621 aaKnown RBP eCLIP23.58■■□□□ 1.37
TNFRSF11A-204ENST00000592013 AAMPQ13685 434 aa23.58■■□□□ 1.37
TNFRSF11A-204ENST00000592013 PLS1Q14651 629 aa23.58■■□□□ 1.37
TNFRSF11A-204ENST00000592013 PPP4R3BQ5MIZ7 849 aa23.58■■□□□ 1.37
TNFRSF11A-204ENST00000592013 POTEEQ6S8J3 1075 aa23.58■■□□□ 1.37
TNFRSF11A-204ENST00000592013 MOV10L1Q9BXT6 1211 aaKnown RBP23.58■■□□□ 1.37
TNFRSF11A-204ENST00000592013 BAZ2AQ9UIF9 1905 aaKnown RBP23.57■■□□□ 1.36
TNFRSF11A-204ENST00000592013 CCL14Q16627 93 aa23.57■■□□□ 1.36
TNFRSF11A-204ENST00000592013 SLFNL1Q499Z3 407 aa23.57■■□□□ 1.36
TNFRSF11A-204ENST00000592013 OLFML2BQ68BL8 750 aa23.57■■□□□ 1.36
TNFRSF11A-204ENST00000592013 ZNF444Q8N0Y2 327 aaPredicted RBP23.57■■□□□ 1.36
TNFRSF11A-204ENST00000592013 SPICE1Q8N0Z3 855 aa23.57■■□□□ 1.36
TNFRSF11A-204ENST00000592013 SYNPO2Q9UMS6 1093 aa23.57■■□□□ 1.36
TNFRSF11A-204ENST00000592013 ROBO3Q96MS0 1386 aa23.56■■□□□ 1.36
TNFRSF11A-204ENST00000592013 CYP2D7A0A087X1C5 515 aa23.56■■□□□ 1.36
TNFRSF11A-204ENST00000592013 MINDY4BA8MYZ0 360 aa23.56■■□□□ 1.36
TNFRSF11A-204ENST00000592013 GPAA1O43292 621 aa23.56■■□□□ 1.36
TNFRSF11A-204ENST00000592013 FCER1AP12319 257 aa23.56■■□□□ 1.36
TNFRSF11A-204ENST00000592013 ERCC3P19447 782 aa23.56■■□□□ 1.36
TNFRSF11A-204ENST00000592013 NCAPG2Q86XI2 1143 aa23.56■■□□□ 1.36
TNFRSF11A-204ENST00000592013 GSG1L2A8MUP6 293 aa23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 RAD21O60216 631 aa23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 ADORA2AP29274 412 aa23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 CNGA1P29973 690 aa23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 RRP1P56182 461 aaKnown RBP23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 EVX2Q03828 476 aa23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 PDE4BQ07343 736 aa23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 DIS3LQ8TF46 1054 aaKnown RBP23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 FSD1Q9BTV5 496 aa23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 NYAP2Q9P242 653 aa23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 RBM27Q9P2N5 1060 aaKnown RBP23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 DDX20Q9UHI6 824 aaKnown RBP23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 CEP290O15078 2479 aa23.55■■□□□ 1.36
TNFRSF11A-204ENST00000592013 ZNF236Q9UL36 1845 aa23.54■■□□□ 1.36
TNFRSF11A-204ENST00000592013 PATL2C9JE40 543 aaKnown RBP23.54■■□□□ 1.36
TNFRSF11A-204ENST00000592013 MX1P20591 662 aa23.54■■□□□ 1.36
TNFRSF11A-204ENST00000592013 CCND3P30281 292 aaPredicted RBP23.54■■□□□ 1.36
TNFRSF11A-204ENST00000592013 SIAH1Q8IUQ4 282 aa23.54■■□□□ 1.36
TNFRSF11A-204ENST00000592013 C7orf61Q8IZ16 206 aa23.54■■□□□ 1.36
TNFRSF11A-204ENST00000592013 OSBP2Q969R2 916 aa23.54■■□□□ 1.36
TNFRSF11A-204ENST00000592013 KCTD2Q14681 263 aa23.53■■□□□ 1.36
TNFRSF11A-204ENST00000592013 TICAM2Q86XR7 235 aa23.53■■□□□ 1.36
TNFRSF11A-204ENST00000592013 ARRDC4Q8NCT1 418 aa23.53■■□□□ 1.36
TNFRSF11A-204ENST00000592013 ATG4CQ96DT6 458 aa23.53■■□□□ 1.36
TNFRSF11A-204ENST00000592013 CTDP1Q9Y5B0 961 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF11A-204ENST00000592013 A0A0G2JMZ2 1700 aa23.53■■□□□ 1.36
TNFRSF11A-204ENST00000592013 LHX8Q68G74 356 aa23.52■■□□□ 1.36
TNFRSF11A-204ENST00000592013 SAMD1Q6SPF0 538 aaPredicted RBP23.52■■□□□ 1.36
TNFRSF11A-204ENST00000592013 NRBP1Q9UHY1 535 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms