RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 PCMTD2Q9NV79 361 aa5.48□□□□□ -1.53
VMP1-212ENST00000591782 BSDC1Q9NW68 430 aaPredicted RBP5.48□□□□□ -1.53
VMP1-212ENST00000591782 LTBP3Q9NS15 1303 aa5.48□□□□□ -1.53
VMP1-212ENST00000591782 A0A1W2PQH9 124 aa5.47□□□□□ -1.53
VMP1-212ENST00000591782 SMAD7O15105 426 aaKnown RBP5.47□□□□□ -1.53
VMP1-212ENST00000591782 HYAL3O43820 417 aaPredicted RBP5.47□□□□□ -1.53
VMP1-212ENST00000591782 NBPF12Q5TAG4 269 aaPredicted RBP5.47□□□□□ -1.53
VMP1-212ENST00000591782 C19orf47Q8N9M1 422 aaKnown RBP5.47□□□□□ -1.53
VMP1-212ENST00000591782 FBXL18Q96ME1 805 aa5.47□□□□□ -1.53
VMP1-212ENST00000591782 HSPA12BQ96MM6 686 aa5.47□□□□□ -1.53
VMP1-212ENST00000591782 TANGO6Q9C0B7 1094 aa5.47□□□□□ -1.53
VMP1-212ENST00000591782 SUCOQ9UBS9 1254 aaKnown RBP5.47□□□□□ -1.53
VMP1-212ENST00000591782 ST14Q9Y5Y6 855 aa5.47□□□□□ -1.53
VMP1-212ENST00000591782 TMEM265A0A087WTH1 108 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 C9IYK1 514 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 H3BS24 57 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 PRNPP04156 253 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 CLCN7P51798 805 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 CASP7P55210 303 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 RNF4P78317 190 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 BNIP3Q12983 259 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 AOC3Q16853 763 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 TDRD10Q5VZ19 366 aaKnown RBP5.46□□□□□ -1.54
VMP1-212ENST00000591782 PPFIBP1Q86W92 1011 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 PIWIL2Q8TC59 973 aaKnown RBP5.46□□□□□ -1.54
VMP1-212ENST00000591782 HRASLS5Q96KN8 279 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 DHRS1Q96LJ7 313 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 MKRN2Q9H000 416 aaKnown RBP5.46□□□□□ -1.54
VMP1-212ENST00000591782 FAM86C1Q9NVL1 165 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 CCDC39Q9UFE4 941 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 PRKAG3Q9UGI9 489 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 KCNH3Q9ULD8 1083 aa5.46□□□□□ -1.54
VMP1-212ENST00000591782 ADAMTS4O75173 837 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 CD96P40200 585 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 PMS1P54277 932 aaKnown RBP5.45□□□□□ -1.54
VMP1-212ENST00000591782 PRKCQQ04759 706 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 SNW1Q13573 536 aaKnown RBP5.45□□□□□ -1.54
VMP1-212ENST00000591782 ARTNQ5T4W7 220 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 ZNF574Q6ZN55 896 aaPredicted RBP5.45□□□□□ -1.54
VMP1-212ENST00000591782 NFXL1Q6ZNB6 911 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 WFDC3Q8IUB2 231 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 BCL7CQ8WUZ0 217 aaPredicted RBP5.45□□□□□ -1.54
VMP1-212ENST00000591782 MISP3Q96FF7 219 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 SEMA3GQ9NS98 782 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 VAV3Q9UKW4 847 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 ZNF214Q9UL59 606 aaPredicted RBP5.45□□□□□ -1.54
VMP1-212ENST00000591782 PCDHB10Q9UN67 800 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 SNX11Q9Y5W9 270 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 SLC12A7Q9Y666 1083 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 PITPNM2Q9BZ72 1349 aa5.45□□□□□ -1.54
VMP1-212ENST00000591782 SHISA3A0PJX4 238 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 WASH4PA8MWX3 477 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 TP53P04637 393 aaPredicted RBP5.44□□□□□ -1.54
VMP1-212ENST00000591782 ATP2B1P20020 1258 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 NBPF9Q3BBW0 867 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 TNNI3KQ59H18 835 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 SPRED2Q7Z698 418 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 VSIG10LQ86VR7 867 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 CCDC144CPQ8IYA2 1237 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 HNRNPLLQ8WVV9 542 aaKnown RBP5.44□□□□□ -1.54
VMP1-212ENST00000591782 UBE2FQ969M7 185 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 GPR62Q9BZJ7 368 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 DUSP15Q9H1R2 295 aaPredicted RBP5.44□□□□□ -1.54
VMP1-212ENST00000591782 PHAXQ9H814 394 aaKnown RBP5.44□□□□□ -1.54
VMP1-212ENST00000591782 ZFP64Q9NPA5 681 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 ACTR10Q9NZ32 417 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 ANGEL1Q9UNK9 670 aaKnown RBP5.44□□□□□ -1.54
VMP1-212ENST00000591782 SLC5A6Q9Y289 635 aa5.44□□□□□ -1.54
VMP1-212ENST00000591782 SHOXO15266 292 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 CD8BP10966 210 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 SRFP11831 508 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 AUHQ13825 339 aaKnown RBP5.43□□□□□ -1.54
VMP1-212ENST00000591782 GNPTABQ3T906 1256 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 AXDND1Q5T1B0 1012 aaPredicted RBP5.43□□□□□ -1.54
VMP1-212ENST00000591782 LARP1BQ659C4 914 aaKnown RBP5.43□□□□□ -1.54
VMP1-212ENST00000591782 DCAF15Q66K64 600 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 ANKS3Q6ZW76 656 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 TMC3Q7Z5M5 1100 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 THAP5Q7Z6K1 395 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 STK11IPQ8N1F8 1099 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 FLCNQ8NFG4 579 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 ASB11Q8WXH4 323 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 KLHL6Q8WZ60 621 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 SMARCC1Q92922 1105 aaPredicted RBP5.43□□□□□ -1.54
VMP1-212ENST00000591782 PRDM14Q9GZV8 571 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 ATP13A1Q9HD20 1204 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 ZSWIM5Q9P217 1185 aa5.43□□□□□ -1.54
VMP1-212ENST00000591782 STK10O94804 968 aaKnown RBP5.42□□□□□ -1.54
VMP1-212ENST00000591782 WNT11O96014 354 aa5.42□□□□□ -1.54
VMP1-212ENST00000591782 GTF2F1P35269 517 aaKnown RBP eCLIP5.42□□□□□ -1.54
VMP1-212ENST00000591782 SLC7A5Q01650 507 aa5.42□□□□□ -1.54
VMP1-212ENST00000591782 NMIQ13287 307 aaPredicted RBP5.42□□□□□ -1.54
VMP1-212ENST00000591782 IKZF1Q13422 519 aa5.42□□□□□ -1.54
VMP1-212ENST00000591782 SF3A1Q15459 793 aaKnown RBP5.42□□□□□ -1.54
VMP1-212ENST00000591782 BBS9Q3SYG4 887 aa5.42□□□□□ -1.54
VMP1-212ENST00000591782 VHLLQ6RSH7 139 aa5.42□□□□□ -1.54
VMP1-212ENST00000591782 Q8N3U1 123 aa5.42□□□□□ -1.54
VMP1-212ENST00000591782 SREK1Q8WXA9 508 aaKnown RBP5.42□□□□□ -1.54
VMP1-212ENST00000591782 DHX38Q92620 1227 aaKnown RBP5.42□□□□□ -1.54
VMP1-212ENST00000591782 TRIT1Q9H3H1 467 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms