RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 TNNI3KQ59H18 835 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 FAM47AQ5JRC9 791 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 KIAA1755Q5JYT7 1200 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 ARRDC4Q8NCT1 418 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 HDAC5Q9UQL6 1122 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 FPGT-TNNI3KV9GXZ4 949 aa12□□□□□ -0.49
RETREG3-211ENST00000591547 TRIM27P14373 513 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 ERCC3P19447 782 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 COL9A1P20849 921 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 USP5P45974 858 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 SEPT2Q15019 361 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 SNX17Q15036 470 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 ZKSCAN2Q63HK3 967 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
RETREG3-211ENST00000591547 ATF7IPQ6VMQ6 1270 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 PPM1EQ8WY54 764 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 FRAT1Q92837 279 aaPredicted RBP11.99□□□□□ -0.49
RETREG3-211ENST00000591547 KIAA1683Q9H0B3 1180 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
RETREG3-211ENST00000591547 A0A0G2JMZ2 1700 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 ZNF236Q9UL36 1845 aa11.99□□□□□ -0.49
RETREG3-211ENST00000591547 SEPT4O43236 478 aa11.98□□□□□ -0.49
RETREG3-211ENST00000591547 IDH1O75874 414 aaKnown RBP11.98□□□□□ -0.49
RETREG3-211ENST00000591547 GNAI2P04899 355 aa11.98□□□□□ -0.49
RETREG3-211ENST00000591547 USP14P54578 494 aa11.98□□□□□ -0.49
RETREG3-211ENST00000591547 CCDC158Q5M9N0 1113 aa11.98□□□□□ -0.49
RETREG3-211ENST00000591547 LBX2Q6XYB7 198 aa11.98□□□□□ -0.49
RETREG3-211ENST00000591547 CLEC10AQ8IUN9 316 aa11.98□□□□□ -0.49
RETREG3-211ENST00000591547 MAGEB6Q8N7X4 407 aa11.98□□□□□ -0.49
RETREG3-211ENST00000591547 ARHGAP45Q92619 1136 aa11.98□□□□□ -0.49
RETREG3-211ENST00000591547 LENG1Q96BZ8 264 aaPredicted RBP11.98□□□□□ -0.49
RETREG3-211ENST00000591547 RNPC3Q96LT9 517 aaKnown RBP11.98□□□□□ -0.49
RETREG3-211ENST00000591547 ANTXR1Q9H6X2 564 aa11.98□□□□□ -0.49
RETREG3-211ENST00000591547 SERPINB13Q9UIV8 391 aa11.98□□□□□ -0.49
RETREG3-211ENST00000591547 NAV1Q8NEY1 1877 aa11.97□□□□□ -0.49
RETREG3-211ENST00000591547 COL11A1P12107 1806 aaPredicted RBP11.97□□□□□ -0.49
RETREG3-211ENST00000591547 PGK1P00558 417 aa11.97□□□□□ -0.49
RETREG3-211ENST00000591547 TAL1P17542 331 aaPredicted RBP11.97□□□□□ -0.49
RETREG3-211ENST00000591547 PLS1Q14651 629 aa11.97□□□□□ -0.49
RETREG3-211ENST00000591547 OLFML2BQ68BL8 750 aa11.97□□□□□ -0.49
RETREG3-211ENST00000591547 NCAPG2Q86XI2 1143 aa11.97□□□□□ -0.49
RETREG3-211ENST00000591547 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
RETREG3-211ENST00000591547 TANGO6Q9C0B7 1094 aa11.97□□□□□ -0.49
RETREG3-211ENST00000591547 SPATC1LQ9H0A9 340 aa11.97□□□□□ -0.49
RETREG3-211ENST00000591547 C1orf115Q9H7X2 142 aa11.97□□□□□ -0.49
RETREG3-211ENST00000591547 DBNLQ9UJU6 430 aaKnown RBP11.97□□□□□ -0.49
RETREG3-211ENST00000591547 PLXNA1Q9UIW2 1896 aa11.96□□□□□ -0.49
RETREG3-211ENST00000591547 PARP14Q460N5 1801 aa11.96□□□□□ -0.49
RETREG3-211ENST00000591547 GRXCR1A8MXD5 290 aa11.96□□□□□ -0.49
RETREG3-211ENST00000591547 MPHOSPH10O00566 681 aaKnown RBP11.96□□□□□ -0.49
RETREG3-211ENST00000591547 IPO8O15397 1037 aaKnown RBP11.96□□□□□ -0.49
RETREG3-211ENST00000591547 PQBP1O60828 265 aaKnown RBP11.96□□□□□ -0.49
RETREG3-211ENST00000591547 CYP2D6P10635 497 aa11.96□□□□□ -0.49
RETREG3-211ENST00000591547 OS9Q13438 667 aaPredicted RBP11.96□□□□□ -0.49
RETREG3-211ENST00000591547 COG2Q14746 738 aa11.96□□□□□ -0.49
RETREG3-211ENST00000591547 ATG4CQ96DT6 458 aa11.96□□□□□ -0.49
RETREG3-211ENST00000591547 MAML3Q96JK9 1138 aa11.96□□□□□ -0.49
RETREG3-211ENST00000591547 CABP5Q9NP86 173 aa11.96□□□□□ -0.49
RETREG3-211ENST00000591547 SMIM22K7EJ46 135 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 TNFRSF10AO00220 468 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 PGK2P07205 417 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 CLTBP09497 229 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 DNAJB2P25686 324 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 PBX2P40425 430 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 RRP1P56182 461 aaKnown RBP11.95□□□□□ -0.5
RETREG3-211ENST00000591547 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
RETREG3-211ENST00000591547 FTSJ3Q8IY81 847 aaKnown RBP11.95□□□□□ -0.5
RETREG3-211ENST00000591547 SPICE1Q8N0Z3 855 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 SLC44A5Q8NCS7 719 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 SYMPKQ92797 1274 aaKnown RBP11.95□□□□□ -0.5
RETREG3-211ENST00000591547 EHD4Q9H223 541 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 GPR108Q9NPR9 543 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 XPNPEP3Q9NQH7 507 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 PHF24Q9UPV7 400 aa11.95□□□□□ -0.5
RETREG3-211ENST00000591547 REV3LO60673 3130 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 A0A1W2PQ45 241 aaPredicted RBP11.94□□□□□ -0.5
RETREG3-211ENST00000591547 A0A1W2PQY0 241 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 KIAA0355O15063 1070 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 STRNO43815 780 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 SURF6O75683 361 aaKnown RBP11.94□□□□□ -0.5
RETREG3-211ENST00000591547 RLBP1P12271 317 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 RAG1P15918 1043 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 DSG3P32926 999 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 POLA2Q14181 598 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 TJAP1Q5JTD0 557 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 TTC6Q86TZ1 520 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 SIAH1Q8IUQ4 282 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 EAF2Q96CJ1 260 aaPredicted RBP11.94□□□□□ -0.5
RETREG3-211ENST00000591547 RIOK1Q9BRS2 568 aaKnown RBP11.94□□□□□ -0.5
RETREG3-211ENST00000591547 ZNF576Q9H609 170 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 TACC3Q9Y6A5 838 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 TTC28Q96AY4 2481 aa11.94□□□□□ -0.5
RETREG3-211ENST00000591547 CHD9Q3L8U1 2897 aa11.93□□□□□ -0.5
RETREG3-211ENST00000591547 POLR3DP05423 398 aaPredicted RBP11.93□□□□□ -0.5
RETREG3-211ENST00000591547 FPGSQ05932 587 aa11.93□□□□□ -0.5
RETREG3-211ENST00000591547 GABPAQ06546 454 aa11.93□□□□□ -0.5
RETREG3-211ENST00000591547 FAAP100Q0VG06 881 aa11.93□□□□□ -0.5
RETREG3-211ENST00000591547 TMEM132BQ14DG7 1078 aa11.93□□□□□ -0.5
RETREG3-211ENST00000591547 CCDC85BQ15834 202 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms