RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 TBC1D32Q96NH3 1257 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 TM6SF1Q9BZW5 370 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 KCNH4Q9UQ05 1017 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 CEP350Q5VT06 3117 aa21.55■■□□□ 1.04
CROCCP3-205ENST00000591316 C19orf81C9J6K1 198 aa21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 TOP1P11387 765 aaKnown RBP21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 KIF23Q02241 960 aaPredicted RBP21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 SEC23AQ15436 765 aa21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 Q6ZUG5 572 aa21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 TMEM87BQ96K49 555 aa21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 KIAA1683Q9H0B3 1180 aa21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 SH2D4AQ9H788 454 aa21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 KAT14Q9H8E8 782 aa21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 EMILIN3Q9NT22 766 aa21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 TMOD4Q9NZQ9 345 aa21.54■■□□□ 1.04
CROCCP3-205ENST00000591316 CCL15-CCL14A0A0B4J2E2 113 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 F5H6K3 240 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 USP14P54578 494 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 KLRC3Q07444 240 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 CCL15Q16663 113 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 USP17L2Q6R6M4 530 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 NFXL1Q6ZNB6 911 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 KIF2CQ99661 725 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 A0A0G2JLL6 359 aaPredicted RBP21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 CETPP11597 493 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 NOVP48745 357 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 NOGQ13253 232 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 KIAA1755Q5JYT7 1200 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 PRRT2Q7Z6L0 340 aaPredicted RBP21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 VCPKMTQ9H867 229 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 GOPCQ9HD26 462 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 PDRG1Q9NUG6 133 aa21.53■■□□□ 1.04
CROCCP3-205ENST00000591316 SH2B2O14492 632 aaPredicted RBP21.52■■□□□ 1.04
CROCCP3-205ENST00000591316 NEK4P51957 841 aa21.52■■□□□ 1.04
CROCCP3-205ENST00000591316 ANKS1AQ92625 1134 aa21.52■■□□□ 1.04
CROCCP3-205ENST00000591316 LARP6Q9BRS8 491 aaKnown RBP21.52■■□□□ 1.04
CROCCP3-205ENST00000591316 LY9Q9HBG7 655 aa21.52■■□□□ 1.04
CROCCP3-205ENST00000591316 ISY1Q9ULR0 285 aaKnown RBP21.52■■□□□ 1.04
CROCCP3-205ENST00000591316 MANSC4A6NHS7 340 aaPredicted RBP21.51■■□□□ 1.03
CROCCP3-205ENST00000591316 SH3D19Q5HYK7 790 aa21.51■■□□□ 1.03
CROCCP3-205ENST00000591316 SLFN13Q68D06 897 aa21.51■■□□□ 1.03
CROCCP3-205ENST00000591316 FASTKD5Q7L8L6 764 aaKnown RBP21.51■■□□□ 1.03
CROCCP3-205ENST00000591316 PNMA1Q8ND90 353 aa21.51■■□□□ 1.03
CROCCP3-205ENST00000591316 BRI3BPQ8WY22 251 aa21.51■■□□□ 1.03
CROCCP3-205ENST00000591316 CCDC69A6NI79 296 aa21.5■■□□□ 1.03
CROCCP3-205ENST00000591316 TREML2Q5T2D2 321 aa21.5■■□□□ 1.03
CROCCP3-205ENST00000591316 TMTC2Q8N394 836 aa21.5■■□□□ 1.03
CROCCP3-205ENST00000591316 IL17RAQ96F46 866 aa21.5■■□□□ 1.03
CROCCP3-205ENST00000591316 NUP88Q99567 741 aaPredicted RBP21.5■■□□□ 1.03
CROCCP3-205ENST00000591316 PTPN18Q99952 460 aa21.5■■□□□ 1.03
CROCCP3-205ENST00000591316 MTA3Q9BTC8 594 aa21.5■■□□□ 1.03
CROCCP3-205ENST00000591316 NAP1L2Q9ULW6 460 aaPredicted RBP21.5■■□□□ 1.03
CROCCP3-205ENST00000591316 WDR19Q8NEZ3 1342 aa21.5■■□□□ 1.03
CROCCP3-205ENST00000591316 NDUFB10O96000 172 aa21.49■■□□□ 1.03
CROCCP3-205ENST00000591316 MOGSQ13724 837 aa21.49■■□□□ 1.03
CROCCP3-205ENST00000591316 RASGRP2Q7LDG7 609 aa21.49■■□□□ 1.03
CROCCP3-205ENST00000591316 BRF1Q92994 677 aa21.49■■□□□ 1.03
CROCCP3-205ENST00000591316 GREB1LQ9C091 1923 aaPredicted RBP21.49■■□□□ 1.03
CROCCP3-205ENST00000591316 PHIPQ8WWQ0 1821 aa21.49■■□□□ 1.03
CROCCP3-205ENST00000591316 LIFRP42702 1097 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 INHBEP58166 350 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 SAMD1Q6SPF0 538 aaPredicted RBP21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 RAB11FIP4Q86YS3 637 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 NUP133Q8WUM0 1156 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 MYL10Q9BUA6 226 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 BTBD19C9JJ37 291 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 VCAM1P19320 739 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 APOBRQ0VD83 1088 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 SREBF2Q12772 1141 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 FAM83BQ5T0W9 1011 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 GPAT2Q6NUI2 795 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 CATIPQ7Z7H3 387 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 PROCA1Q8NCQ7 364 aaPredicted RBP21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 GMCL1P1Q8NEA9 526 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 RPAP3Q9H6T3 665 aaPredicted RBP21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 SLC12A7Q9Y666 1083 aa21.48■■□□□ 1.03
CROCCP3-205ENST00000591316 TESPA1A2RU30 521 aaPredicted RBP21.47■■□□□ 1.03
CROCCP3-205ENST00000591316 MAP2K2P36507 400 aa21.47■■□□□ 1.03
CROCCP3-205ENST00000591316 SLC1A4P43007 532 aa21.47■■□□□ 1.03
CROCCP3-205ENST00000591316 KCTD1Q719H9 257 aa21.47■■□□□ 1.03
CROCCP3-205ENST00000591316 NOL8Q76FK4 1167 aaKnown RBP21.47■■□□□ 1.03
CROCCP3-205ENST00000591316 FAM43AQ8N2R8 423 aa21.47■■□□□ 1.03
CROCCP3-205ENST00000591316 LPAR1Q92633 364 aa21.47■■□□□ 1.03
CROCCP3-205ENST00000591316 C12orf42Q96LP6 360 aa21.47■■□□□ 1.03
CROCCP3-205ENST00000591316 BRPF3Q9ULD4 1205 aa21.47■■□□□ 1.03
CROCCP3-205ENST00000591316 FRMPD2Q68DX3 1309 aaPredicted RBP21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 RXRAP19793 462 aa21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 TM4SF4P48230 202 aa21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 TOB2Q14106 344 aaPredicted RBP21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 CCDC96Q2M329 555 aa21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 SYNE3Q6ZMZ3 975 aa21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 IFNL1Q8IU54 200 aa21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 ZNF654Q8IZM8 581 aa21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 DNAJC5GQ8N7S2 189 aa21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 TANGO6Q9C0B7 1094 aa21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 SYNPO2Q9UMS6 1093 aa21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 AGTPBP1Q9UPW5 1226 aa21.46■■□□□ 1.03
CROCCP3-205ENST00000591316 KLF18A0A0U1RQI7 1052 aa21.45■■□□□ 1.02
CROCCP3-205ENST00000591316 PDHXO00330 501 aa21.45■■□□□ 1.02
CROCCP3-205ENST00000591316 IGF2BP3O00425 579 aaKnown RBP eCLIP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms