RNA–Protein interactions for RNA: ENST00000591004.1

SMIM22-208, Transcript of small integral membrane protein 22, humanhuman

TSL 3

Gene SMIM22, Length 862 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-208ENST00000591004 LPAR1Q92633 364 aa18.35■□□□□ 0.53
SMIM22-208ENST00000591004 TANGO6Q9C0B7 1094 aa18.35■□□□□ 0.53
SMIM22-208ENST00000591004 VCPKMTQ9H867 229 aa18.35■□□□□ 0.53
SMIM22-208ENST00000591004 GOPCQ9HD26 462 aa18.35■□□□□ 0.53
SMIM22-208ENST00000591004 TOMM22Q9NS69 142 aa18.35■□□□□ 0.53
SMIM22-208ENST00000591004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.35■□□□□ 0.53
SMIM22-208ENST00000591004 MGAMO43451 1857 aa18.35■□□□□ 0.53
SMIM22-208ENST00000591004 TSPY2A6NKD2 308 aa18.34■□□□□ 0.53
SMIM22-208ENST00000591004 HOXD10P28358 340 aa18.34■□□□□ 0.53
SMIM22-208ENST00000591004 KIAA1755Q5JYT7 1200 aa18.34■□□□□ 0.53
SMIM22-208ENST00000591004 NEDD1Q8NHV4 660 aa18.34■□□□□ 0.53
SMIM22-208ENST00000591004 GTF3C2Q8WUA4 911 aaPredicted RBP18.34■□□□□ 0.53
SMIM22-208ENST00000591004 CEP95Q96GE4 821 aa18.34■□□□□ 0.53
SMIM22-208ENST00000591004 PAGR1Q9BTK6 254 aa18.34■□□□□ 0.53
SMIM22-208ENST00000591004 NYAP2Q9P242 653 aa18.34■□□□□ 0.53
SMIM22-208ENST00000591004 PLIN4Q96Q06 1357 aa18.33■□□□□ 0.53
SMIM22-208ENST00000591004 RAD50Q92878 1312 aa18.33■□□□□ 0.53
SMIM22-208ENST00000591004 IGKV6D-41A0A0C4DH26 115 aa18.33■□□□□ 0.52
SMIM22-208ENST00000591004 TNPO2O14787 897 aaKnown RBP18.33■□□□□ 0.52
SMIM22-208ENST00000591004 RANBP6O60518 1105 aaKnown RBP18.33■□□□□ 0.52
SMIM22-208ENST00000591004 RRP12Q5JTH9 1297 aaKnown RBP18.33■□□□□ 0.52
SMIM22-208ENST00000591004 GPRC5AQ8NFJ5 357 aa18.33■□□□□ 0.52
SMIM22-208ENST00000591004 DSCC1Q9BVC3 393 aa18.33■□□□□ 0.52
SMIM22-208ENST00000591004 IL25Q9H293 177 aa18.33■□□□□ 0.52
SMIM22-208ENST00000591004 MORF4L1Q9UBU8 362 aa18.33■□□□□ 0.52
SMIM22-208ENST00000591004 CLIP2Q9UDT6 1046 aa18.33■□□□□ 0.52
SMIM22-208ENST00000591004 MYH4Q9Y623 1939 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 ZNF213O14771 459 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 WDR46O15213 610 aaKnown RBP18.32■□□□□ 0.52
SMIM22-208ENST00000591004 ORC4O43929 436 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 PEX10O60683 326 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 TTLL1O95922 423 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 PRMT2P55345 433 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 TXNRD2Q9NNW7 524 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 MTMR4Q9NYA4 1195 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 RBPJLQ9UBG7 517 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 SRRDQ9UH36 339 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 TACC3Q9Y6A5 838 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 PTCH2Q9Y6C5 1203 aa18.32■□□□□ 0.52
SMIM22-208ENST00000591004 MYPNQ86TC9 1320 aa18.31■□□□□ 0.52
SMIM22-208ENST00000591004 LAMA4Q16363 1823 aa18.31■□□□□ 0.52
SMIM22-208ENST00000591004 FGRP09769 529 aa18.31■□□□□ 0.52
SMIM22-208ENST00000591004 COG2Q14746 738 aa18.31■□□□□ 0.52
SMIM22-208ENST00000591004 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
SMIM22-208ENST00000591004 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
SMIM22-208ENST00000591004 MFSD6Q6ZSS7 791 aa18.31■□□□□ 0.52
SMIM22-208ENST00000591004 TBC1D10CQ8IV04 446 aa18.31■□□□□ 0.52
SMIM22-208ENST00000591004 CTNNA3Q9UI47 895 aa18.31■□□□□ 0.52
SMIM22-208ENST00000591004 SPDYE16A6NNV3 312 aaPredicted RBP18.3■□□□□ 0.52
SMIM22-208ENST00000591004 FLOT1O75955 427 aa18.3■□□□□ 0.52
SMIM22-208ENST00000591004 ERVK-9P63128 1117 aa18.3■□□□□ 0.52
SMIM22-208ENST00000591004 ERVK-24P63145 666 aa18.3■□□□□ 0.52
SMIM22-208ENST00000591004 IMMTQ16891 758 aaKnown RBP18.3■□□□□ 0.52
SMIM22-208ENST00000591004 PPP4R3BQ5MIZ7 849 aa18.3■□□□□ 0.52
SMIM22-208ENST00000591004 CCAR1Q8IX12 1150 aaKnown RBP18.3■□□□□ 0.52
SMIM22-208ENST00000591004 LRRC47Q8N1G4 583 aaKnown RBP18.3■□□□□ 0.52
SMIM22-208ENST00000591004 RAET1EQ8TD07 263 aa18.3■□□□□ 0.52
SMIM22-208ENST00000591004 STAG1Q8WVM7 1258 aa18.3■□□□□ 0.52
SMIM22-208ENST00000591004 COA7Q96BR5 231 aa18.3■□□□□ 0.52
SMIM22-208ENST00000591004 NBPF3Q9H094 633 aa18.3■□□□□ 0.52
SMIM22-208ENST00000591004 RNF41Q9H4P4 317 aaPredicted RBP18.3■□□□□ 0.52
SMIM22-208ENST00000591004 HOXC10Q9NYD6 342 aa18.3■□□□□ 0.52
SMIM22-208ENST00000591004 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
SMIM22-208ENST00000591004 F5H6K3 240 aa18.29■□□□□ 0.52
SMIM22-208ENST00000591004 NMT2O60551 498 aa18.29■□□□□ 0.52
SMIM22-208ENST00000591004 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
SMIM22-208ENST00000591004 PRKCZQ05513 592 aa18.29■□□□□ 0.52
SMIM22-208ENST00000591004 KLRC3Q07444 240 aa18.29■□□□□ 0.52
SMIM22-208ENST00000591004 SLC9C1Q4G0N8 1177 aa18.29■□□□□ 0.52
SMIM22-208ENST00000591004 BMP2KLQ5H9B9 411 aa18.29■□□□□ 0.52
SMIM22-208ENST00000591004 FAM83BQ5T0W9 1011 aa18.29■□□□□ 0.52
SMIM22-208ENST00000591004 POTEEQ6S8J3 1075 aa18.29■□□□□ 0.52
SMIM22-208ENST00000591004 MKL1Q969V6 931 aa18.29■□□□□ 0.52
SMIM22-208ENST00000591004 STX8Q9UNK0 236 aa18.29■□□□□ 0.52
SMIM22-208ENST00000591004 SGSM2O43147 1006 aa18.28■□□□□ 0.52
SMIM22-208ENST00000591004 NDUFB10O96000 172 aa18.28■□□□□ 0.52
SMIM22-208ENST00000591004 Q3C1V9 767 aa18.28■□□□□ 0.52
SMIM22-208ENST00000591004 ERICH6BQ5W0A0 696 aa18.28■□□□□ 0.52
SMIM22-208ENST00000591004 LBX2Q6XYB7 198 aa18.28■□□□□ 0.52
SMIM22-208ENST00000591004 NUP88Q99567 741 aaPredicted RBP18.28■□□□□ 0.52
SMIM22-208ENST00000591004 CWC22Q9HCG8 908 aaKnown RBP18.28■□□□□ 0.52
SMIM22-208ENST00000591004 IL17RBQ9NRM6 502 aa18.28■□□□□ 0.52
SMIM22-208ENST00000591004 PPP4R2Q9NY27 417 aa18.28■□□□□ 0.52
SMIM22-208ENST00000591004 SYNPO2Q9UMS6 1093 aa18.28■□□□□ 0.52
SMIM22-208ENST00000591004 GABRQQ9UN88 632 aa18.28■□□□□ 0.52
SMIM22-208ENST00000591004 NEDD4P46934 1319 aa18.27■□□□□ 0.52
SMIM22-208ENST00000591004 CNMDO75829 334 aa18.27■□□□□ 0.52
SMIM22-208ENST00000591004 DSG3P32926 999 aa18.27■□□□□ 0.52
SMIM22-208ENST00000591004 FLT3LGP49771 235 aa18.27■□□□□ 0.52
SMIM22-208ENST00000591004 CCNA1P78396 465 aa18.27■□□□□ 0.52
SMIM22-208ENST00000591004 NBPF11Q86T75 865 aa18.27■□□□□ 0.52
SMIM22-208ENST00000591004 FBXO28Q9NVF7 368 aa18.27■□□□□ 0.52
SMIM22-208ENST00000591004 BTBD7Q9P203 1132 aa18.27■□□□□ 0.52
SMIM22-208ENST00000591004 RLFQ13129 1914 aa18.27■□□□□ 0.51
SMIM22-208ENST00000591004 PARP14Q460N5 1801 aa18.26■□□□□ 0.51
SMIM22-208ENST00000591004 MAPK4P31152 587 aa18.26■□□□□ 0.51
SMIM22-208ENST00000591004 PTH1RQ03431 593 aa18.26■□□□□ 0.51
SMIM22-208ENST00000591004 SLFN13Q68D06 897 aa18.26■□□□□ 0.51
SMIM22-208ENST00000591004 GMCL1P1Q8NEA9 526 aa18.26■□□□□ 0.51
SMIM22-208ENST00000591004 SH3TC2Q8TF17 1288 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms