RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 PRKAG2Q9UGJ0 569 aa13.22□□□□□ -0.29
GFAP-217ENST00000590922 SAP30BPQ9UHR5 308 aaKnown RBP13.22□□□□□ -0.29
GFAP-217ENST00000590922 PALD1Q9ULE6 856 aa13.22□□□□□ -0.29
GFAP-217ENST00000590922 RABGAP1Q9Y3P9 1069 aa13.22□□□□□ -0.29
GFAP-217ENST00000590922 LTBP2Q14767 1821 aa13.21□□□□□ -0.29
GFAP-217ENST00000590922 SLC15A5A6NIM6 579 aa13.21□□□□□ -0.29
GFAP-217ENST00000590922 USP5P45974 858 aa13.21□□□□□ -0.29
GFAP-217ENST00000590922 LCORLQ8N3X6 602 aa13.21□□□□□ -0.29
GFAP-217ENST00000590922 LPAR1Q92633 364 aa13.21□□□□□ -0.29
GFAP-217ENST00000590922 FLRT1Q9NZU1 646 aa13.21□□□□□ -0.29
GFAP-217ENST00000590922 DDX20Q9UHI6 824 aaKnown RBP13.21□□□□□ -0.29
GFAP-217ENST00000590922 MYH7P12883 1935 aa13.21□□□□□ -0.3
GFAP-217ENST00000590922 DNM1LO00429 736 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 ERC2O15083 957 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 HLA-DOAP06340 250 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 CNGA1P29973 690 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 ATN1P54259 1190 aaPredicted RBP13.2□□□□□ -0.3
GFAP-217ENST00000590922 ATP2B2Q01814 1243 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 WDR78Q5VTH9 848 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 CERS3Q8IU89 383 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 KBTBD3Q8NAB2 608 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 C12orf42Q96LP6 360 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 FEZ1Q99689 392 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 IVNS1ABPQ9Y6Y0 642 aa13.2□□□□□ -0.3
GFAP-217ENST00000590922 MYH1P12882 1939 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 RLFQ13129 1914 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 VCANP13611 3396 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 EYSQ5T1H1 3165 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 USP17L15C9J2P7 530 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 USP17L13C9JLJ4 530 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 USP17L11C9JVI0 530 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 CNMDO75829 334 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 MBD4O95243 580 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 GH2P01242 217 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 HOXC6P09630 235 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 PDE1AP54750 535 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 RTP1P59025 263 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 NUCB1Q02818 461 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 ZSCAN25Q6NSZ9 544 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 SDR42E1Q8WUS8 393 aa13.19□□□□□ -0.3
GFAP-217ENST00000590922 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
GFAP-217ENST00000590922 CRNKL1Q9BZJ0 848 aaKnown RBP13.19□□□□□ -0.3
GFAP-217ENST00000590922 PUS7LQ9H0K6 701 aaKnown RBP13.19□□□□□ -0.3
GFAP-217ENST00000590922 PRUNE2Q8WUY3 3088 aa13.18□□□□□ -0.3
GFAP-217ENST00000590922 PRKAB2O43741 272 aa13.18□□□□□ -0.3
GFAP-217ENST00000590922 PTPREP23469 700 aa13.18□□□□□ -0.3
GFAP-217ENST00000590922 GRB14Q14449 540 aa13.18□□□□□ -0.3
GFAP-217ENST00000590922 ZYXQ15942 572 aaKnown RBP13.18□□□□□ -0.3
GFAP-217ENST00000590922 CATSPERGQ6ZRH7 1159 aa13.18□□□□□ -0.3
GFAP-217ENST00000590922 MAFAQ8NHW3 353 aaPredicted RBP13.18□□□□□ -0.3
GFAP-217ENST00000590922 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
GFAP-217ENST00000590922 CYP2C19P33261 490 aa13.17□□□□□ -0.3
GFAP-217ENST00000590922 USP14P54578 494 aa13.17□□□□□ -0.3
GFAP-217ENST00000590922 EVX2Q03828 476 aa13.17□□□□□ -0.3
GFAP-217ENST00000590922 SHHQ15465 462 aa13.17□□□□□ -0.3
GFAP-217ENST00000590922 LBX2Q6XYB7 198 aa13.17□□□□□ -0.3
GFAP-217ENST00000590922 ARRDC4Q8NCT1 418 aa13.17□□□□□ -0.3
GFAP-217ENST00000590922 NPLOC4Q8TAT6 608 aa13.17□□□□□ -0.3
GFAP-217ENST00000590922 OSBP2Q969R2 916 aa13.17□□□□□ -0.3
GFAP-217ENST00000590922 SEMA6BQ9H3T3 888 aa13.17□□□□□ -0.3
GFAP-217ENST00000590922 ATP11BQ9Y2G3 1177 aa13.17□□□□□ -0.3
GFAP-217ENST00000590922 KBTBD13C9JR72 458 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 CYBAP13498 195 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 VCAM1P19320 739 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 PLCD1P51178 756 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 RAB3GAP1Q15042 981 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 GJC2Q5T442 439 aaPredicted RBP13.16□□□□□ -0.3
GFAP-217ENST00000590922 TATDN1Q6P1N9 297 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 SLC39A5Q6ZMH5 540 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 TRPV1Q8NER1 839 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 FSD1Q9BTV5 496 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
GFAP-217ENST00000590922 MCM9Q9NXL9 1143 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 BTBD7Q9P203 1132 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
GFAP-217ENST00000590922 NAV1Q8NEY1 1877 aa13.15□□□□□ -0.3
GFAP-217ENST00000590922 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
GFAP-217ENST00000590922 IGHA2P01877 340 aa13.15□□□□□ -0.3
GFAP-217ENST00000590922 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
GFAP-217ENST00000590922 CYP2D6P10635 497 aa13.15□□□□□ -0.3
GFAP-217ENST00000590922 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
GFAP-217ENST00000590922 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
GFAP-217ENST00000590922 DPP9Q86TI2 863 aa13.15□□□□□ -0.3
GFAP-217ENST00000590922 TTC6Q86TZ1 520 aa13.15□□□□□ -0.3
GFAP-217ENST00000590922 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
GFAP-217ENST00000590922 APPBP2Q92624 585 aa13.15□□□□□ -0.3
GFAP-217ENST00000590922 PRDM6Q9NQX0 595 aa13.15□□□□□ -0.3
GFAP-217ENST00000590922 PRDM5Q9NQX1 630 aaPredicted RBP13.15□□□□□ -0.3
GFAP-217ENST00000590922 SERPINB13Q9UIV8 391 aa13.15□□□□□ -0.3
GFAP-217ENST00000590922 SLC4A4Q9Y6R1 1079 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms