RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 TSPY2A6NKD2 308 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 RANBP6O60518 1105 aaKnown RBP11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 VCAM1P19320 739 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 CTCFP49711 727 aaPredicted RBP11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 USP14P54578 494 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 TAF1CQ15572 869 aaPredicted RBP11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 ZYXQ15942 572 aaKnown RBP11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 NOM1Q5C9Z4 860 aaKnown RBP11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 RRP12Q5JTH9 1297 aaKnown RBP11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 KIAA1755Q5JYT7 1200 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 STOX1Q6ZVD7 989 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 SH2D4AQ9H788 454 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 VCPKMTQ9H867 229 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 IL17RBQ9NRM6 502 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 TMOD4Q9NZQ9 345 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 SYNPO2Q9UMS6 1093 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 GTF3C3Q9Y5Q9 886 aa11.05□□□□□ -0.64
HMGN1P31-201ENST00000590085 NMT2O60551 498 aa11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 TBC1D8O95759 1140 aa11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 TTLL1O95922 423 aa11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 HOXA7P31268 230 aaPredicted RBP11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 NECTIN1Q15223 517 aa11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 LPAR1Q92633 364 aa11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 ESR2Q92731 530 aa11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 MKL1Q969V6 931 aa11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 PARK7Q99497 189 aaKnown RBP11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 CNNM2Q9H8M5 875 aa11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 TOMM22Q9NS69 142 aa11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 TCP11L1Q9NUJ3 509 aa11.04□□□□□ -0.64
HMGN1P31-201ENST00000590085 B4E1Z4 1266 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 E7EWF7 191 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 SLC27A2O14975 620 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 TLR2O60603 784 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 KDM4AO75164 1064 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 REC8O95072 547 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 CYP2C8P10632 490 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 PABPC4Q13310 644 aaKnown RBP eCLIP11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 PPP4R3BQ5MIZ7 849 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 CREB3L3Q68CJ9 461 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 RCSD1Q6JBY9 416 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 LRRC47Q8N1G4 583 aaKnown RBP11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 GMCL1P1Q8NEA9 526 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 KRT23Q9C075 422 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 ASCC2Q9H1I8 757 aaPredicted RBP11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 ZFYVE28Q9HCC9 887 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 PNMA3Q9UL41 463 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 LCTP09848 1927 aa11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 BAZ2BQ9UIF8 2168 aaKnown RBP11.03□□□□□ -0.64
HMGN1P31-201ENST00000590085 BRCA2P51587 3418 aa11.02□□□□□ -0.64
HMGN1P31-201ENST00000590085 GPR25O00155 361 aa11.02□□□□□ -0.65
HMGN1P31-201ENST00000590085 WDR46O15213 610 aaKnown RBP11.02□□□□□ -0.65
HMGN1P31-201ENST00000590085 EPB41L2O43491 1005 aaKnown RBP11.02□□□□□ -0.65
HMGN1P31-201ENST00000590085 NDUFB10O96000 172 aa11.02□□□□□ -0.65
HMGN1P31-201ENST00000590085 LBX1P52954 281 aa11.02□□□□□ -0.65
HMGN1P31-201ENST00000590085 MB21D2Q8IYB1 491 aaPredicted RBP11.02□□□□□ -0.65
HMGN1P31-201ENST00000590085 KCNB2Q92953 911 aa11.02□□□□□ -0.65
HMGN1P31-201ENST00000590085 RPAP3Q9H6T3 665 aaPredicted RBP11.02□□□□□ -0.65
HMGN1P31-201ENST00000590085 GOPCQ9HD26 462 aa11.02□□□□□ -0.65
HMGN1P31-201ENST00000590085 CLIP2Q9UDT6 1046 aa11.02□□□□□ -0.65
HMGN1P31-201ENST00000590085 USP17L15C9J2P7 530 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 USP17L13C9JLJ4 530 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 USP17L11C9JVI0 530 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 USP17L18D6R9N7 530 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 USP17L22D6RA61 530 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 USP17L17D6RBQ6 530 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 USP17L19D6RCP7 530 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 USP17L20D6RJB6 530 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 F5H6K3 240 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 BCRP11274 1271 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 HERVK_113P62684 666 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 IRX3P78415 501 aaPredicted RBP11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 KLRC3Q07444 240 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 USP17L24Q0WX57 530 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 COL9A3Q14050 684 aaPredicted RBP11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 POTEEQ6S8J3 1075 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 C17orf99Q6UX52 265 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 CATSPERGQ6ZRH7 1159 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 CYB5R4Q7L1T6 521 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 SPICE1Q8N0Z3 855 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 ENAHQ8N8S7 591 aaPredicted RBP11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 ZNF296Q8WUU4 475 aaPredicted RBP11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 PRDM10Q9NQV6 1147 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 ZSWIM5Q9P217 1185 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 STX8Q9UNK0 236 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 TNKSO95271 1327 aa11.01□□□□□ -0.65
HMGN1P31-201ENST00000590085 SPDYE16A6NNV3 312 aaPredicted RBP11□□□□□ -0.65
HMGN1P31-201ENST00000590085 TOP1P11387 765 aaKnown RBP11□□□□□ -0.65
HMGN1P31-201ENST00000590085 OSBPP22059 807 aa11□□□□□ -0.65
HMGN1P31-201ENST00000590085 HSPA4P34932 840 aa11□□□□□ -0.65
HMGN1P31-201ENST00000590085 ANTXR2P58335 489 aa11□□□□□ -0.65
HMGN1P31-201ENST00000590085 TRDNQ13061 729 aa11□□□□□ -0.65
HMGN1P31-201ENST00000590085 SEC23AQ15436 765 aa11□□□□□ -0.65
HMGN1P31-201ENST00000590085 TSGA10IPQ3SY00 556 aa11□□□□□ -0.65
HMGN1P31-201ENST00000590085 FAM83BQ5T0W9 1011 aa11□□□□□ -0.65
HMGN1P31-201ENST00000590085 RNF20Q5VTR2 975 aa11□□□□□ -0.65
HMGN1P31-201ENST00000590085 LBX2Q6XYB7 198 aa11□□□□□ -0.65
HMGN1P31-201ENST00000590085 RASGRP2Q7LDG7 609 aa11□□□□□ -0.65
HMGN1P31-201ENST00000590085 RALYLQ86SE5 291 aaKnown RBP11□□□□□ -0.65
HMGN1P31-201ENST00000590085 IQCA1Q86XH1 822 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms