RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
RFX1-207ENST00000589937 PLEKHH3Q7Z736 793 aa15.24■□□□□ 0.03
RFX1-207ENST00000589937 PI4K2BQ8TCG2 481 aa15.24■□□□□ 0.03
RFX1-207ENST00000589937 SOCS4Q8WXH5 440 aa15.24■□□□□ 0.03
RFX1-207ENST00000589937 DPF3Q92784 378 aa15.24■□□□□ 0.03
RFX1-207ENST00000589937 STRBPQ96SI9 672 aaKnown RBP15.24■□□□□ 0.03
RFX1-207ENST00000589937 NUDT12Q9BQG2 462 aa15.24■□□□□ 0.03
RFX1-207ENST00000589937 CRISPLD2Q9H0B8 497 aa15.24■□□□□ 0.03
RFX1-207ENST00000589937 FLRT1Q9NZU1 646 aa15.24■□□□□ 0.03
RFX1-207ENST00000589937 RABGAP1Q9Y3P9 1069 aa15.24■□□□□ 0.03
RFX1-207ENST00000589937 GSG1L2A8MUP6 293 aa15.23■□□□□ 0.03
RFX1-207ENST00000589937 ZKSCAN1P17029 563 aaPredicted RBP15.23■□□□□ 0.03
RFX1-207ENST00000589937 CCND3P30281 292 aaPredicted RBP15.23■□□□□ 0.03
RFX1-207ENST00000589937 MNX1P50219 401 aaPredicted RBP15.23■□□□□ 0.03
RFX1-207ENST00000589937 MAP3K21Q5TCX8 1036 aa15.23■□□□□ 0.03
RFX1-207ENST00000589937 GTF3C2Q8WUA4 911 aaPredicted RBP15.23■□□□□ 0.03
RFX1-207ENST00000589937 GPATCH3Q96I76 525 aa15.23■□□□□ 0.03
RFX1-207ENST00000589937 PAWRQ96IZ0 340 aaKnown RBP15.23■□□□□ 0.03
RFX1-207ENST00000589937 SEC62Q99442 399 aaKnown RBP15.23■□□□□ 0.03
RFX1-207ENST00000589937 APBA2Q99767 749 aa15.23■□□□□ 0.03
RFX1-207ENST00000589937 ROBO3Q96MS0 1386 aa15.23■□□□□ 0.03
RFX1-207ENST00000589937 RNF113AO15541 343 aaKnown RBP15.22■□□□□ 0.03
RFX1-207ENST00000589937 GPAA1O43292 621 aa15.22■□□□□ 0.03
RFX1-207ENST00000589937 ATP2B2Q01814 1243 aa15.22■□□□□ 0.03
RFX1-207ENST00000589937 CACNB2Q08289 660 aaPredicted RBP15.22■□□□□ 0.03
RFX1-207ENST00000589937 ZSCAN25Q6NSZ9 544 aa15.22■□□□□ 0.03
RFX1-207ENST00000589937 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
RFX1-207ENST00000589937 LBX2Q6XYB7 198 aa15.22■□□□□ 0.03
RFX1-207ENST00000589937 CCAR1Q8IX12 1150 aaKnown RBP15.22■□□□□ 0.03
RFX1-207ENST00000589937 APPBP2Q92624 585 aa15.22■□□□□ 0.03
RFX1-207ENST00000589937 ATG4CQ96DT6 458 aa15.22■□□□□ 0.03
RFX1-207ENST00000589937 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.22■□□□□ 0.03
RFX1-207ENST00000589937 CWC22Q9HCG8 908 aaKnown RBP15.22■□□□□ 0.03
RFX1-207ENST00000589937 FBXO28Q9NVF7 368 aa15.22■□□□□ 0.03
RFX1-207ENST00000589937 RPTORQ8N122 1335 aa15.21■□□□□ 0.03
RFX1-207ENST00000589937 SALL3Q9BXA9 1300 aa15.21■□□□□ 0.03
RFX1-207ENST00000589937 LAMA3Q16787 3333 aa15.21■□□□□ 0.03
RFX1-207ENST00000589937 EEF2P13639 858 aaKnown RBP15.21■□□□□ 0.03
RFX1-207ENST00000589937 RASA1P20936 1047 aa15.21■□□□□ 0.03
RFX1-207ENST00000589937 RGS2P41220 211 aa15.21■□□□□ 0.03
RFX1-207ENST00000589937 MAP2K5Q13163 448 aa15.21■□□□□ 0.03
RFX1-207ENST00000589937 MOV10L1Q9BXT6 1211 aaKnown RBP15.21■□□□□ 0.03
RFX1-207ENST00000589937 HMX1Q9NP08 348 aaPredicted RBP15.21■□□□□ 0.03
RFX1-207ENST00000589937 ARPP21Q9UBL0 812 aaPredicted RBP15.21■□□□□ 0.03
RFX1-207ENST00000589937 TMX2Q9Y320 296 aa15.21■□□□□ 0.03
RFX1-207ENST00000589937 MCM3APO60318 1980 aa15.21■□□□□ 0.03
RFX1-207ENST00000589937 MINDY4BA8MYZ0 360 aa15.2■□□□□ 0.02
RFX1-207ENST00000589937 FLOT1O75955 427 aa15.2■□□□□ 0.02
RFX1-207ENST00000589937 XRCC5P13010 732 aaKnown RBP15.2■□□□□ 0.02
RFX1-207ENST00000589937 NPLOC4Q8TAT6 608 aa15.2■□□□□ 0.02
RFX1-207ENST00000589937 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
RFX1-207ENST00000589937 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
RFX1-207ENST00000589937 HTATIP2Q9BUP3 242 aa15.2■□□□□ 0.02
RFX1-207ENST00000589937 VCPKMTQ9H867 229 aa15.2■□□□□ 0.02
RFX1-207ENST00000589937 ARHGEF10LQ9HCE6 1279 aa15.2■□□□□ 0.02
RFX1-207ENST00000589937 PRDM1O75626 825 aa15.19■□□□□ 0.02
RFX1-207ENST00000589937 PTPREP23469 700 aa15.19■□□□□ 0.02
RFX1-207ENST00000589937 FXR1P51114 621 aaKnown RBP eCLIP15.19■□□□□ 0.02
RFX1-207ENST00000589937 CCNA1P78396 465 aa15.19■□□□□ 0.02
RFX1-207ENST00000589937 GRB14Q14449 540 aa15.19■□□□□ 0.02
RFX1-207ENST00000589937 CCDC129Q6ZRS4 1044 aa15.19■□□□□ 0.02
RFX1-207ENST00000589937 AMOTL1Q8IY63 956 aa15.19■□□□□ 0.02
RFX1-207ENST00000589937 DDRGK1Q96HY6 314 aa15.19■□□□□ 0.02
RFX1-207ENST00000589937 SPATC1LQ9H0A9 340 aa15.19■□□□□ 0.02
RFX1-207ENST00000589937 SMCHD1A6NHR9 2005 aa15.19■□□□□ 0.02
RFX1-207ENST00000589937 PFASO15067 1338 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 TTC41PQ6P2S7 1318 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 SLC15A5A6NIM6 579 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 FOXP2O15409 715 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 RAD21O60216 631 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 ERCC3P19447 782 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 MX1P20591 662 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 DSG3P32926 999 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 TDO2P48775 406 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 PLS1Q14651 629 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 COG2Q14746 738 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 FAM83BQ5T0W9 1011 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 TRPV1Q8NER1 839 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 CCDC17Q96LX7 622 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 FSD1Q9BTV5 496 aa15.18■□□□□ 0.02
RFX1-207ENST00000589937 RBM27Q9P2N5 1060 aaKnown RBP15.18■□□□□ 0.02
RFX1-207ENST00000589937 WDR46O15213 610 aaKnown RBP15.17■□□□□ 0.02
RFX1-207ENST00000589937 ADORA2AP29274 412 aa15.17■□□□□ 0.02
RFX1-207ENST00000589937 CYP2C19P33261 490 aa15.17■□□□□ 0.02
RFX1-207ENST00000589937 SBK1Q52WX2 424 aa15.17■□□□□ 0.02
RFX1-207ENST00000589937 LHX8Q68G74 356 aa15.17■□□□□ 0.02
RFX1-207ENST00000589937 C7orf61Q8IZ16 206 aa15.17■□□□□ 0.02
RFX1-207ENST00000589937 LPAR1Q92633 364 aa15.17■□□□□ 0.02
RFX1-207ENST00000589937 OGDHLQ9ULD0 1010 aa15.17■□□□□ 0.02
RFX1-207ENST00000589937 LAMA4Q16363 1823 aa15.17■□□□□ 0.02
RFX1-207ENST00000589937 LTBP2Q14767 1821 aa15.16■□□□□ 0.02
RFX1-207ENST00000589937 EVI5O60447 810 aa15.16■□□□□ 0.02
RFX1-207ENST00000589937 COBLO75128 1261 aa15.16■□□□□ 0.02
RFX1-207ENST00000589937 GLRX3O76003 335 aaKnown RBP15.16■□□□□ 0.02
RFX1-207ENST00000589937 ZFYP08048 801 aaPredicted RBP15.16■□□□□ 0.02
RFX1-207ENST00000589937 TMEM132BQ14DG7 1078 aa15.16■□□□□ 0.02
RFX1-207ENST00000589937 ZMYM1Q5SVZ6 1142 aa15.16■□□□□ 0.02
RFX1-207ENST00000589937 ANKRD45Q5TZF3 282 aa15.16■□□□□ 0.02
RFX1-207ENST00000589937 NECAB2Q7Z6G3 386 aa15.16■□□□□ 0.02
RFX1-207ENST00000589937 SH2D4AQ9H788 454 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms