RNA–Protein interactions for RNA: ENST00000589890.1

CDIP1-214, Transcript of cell death inducing p53 target 1, humanhuman

TSL 5

Gene CDIP1, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-214ENST00000589890 CTNNA3Q9UI47 895 aa13.4□□□□□ -0.26
CDIP1-214ENST00000589890 USP17L15C9J2P7 530 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 USP17L13C9JLJ4 530 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 USP17L11C9JVI0 530 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 USP17L18D6R9N7 530 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 USP17L22D6RA61 530 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 USP17L17D6RBQ6 530 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 USP17L19D6RCP7 530 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 USP17L20D6RJB6 530 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 PCP11498 1178 aaKnown RBP13.39□□□□□ -0.27
CDIP1-214ENST00000589890 HERVK_113P62684 666 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 USP17L24Q0WX57 530 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 RRP12Q5JTH9 1297 aaKnown RBP13.39□□□□□ -0.27
CDIP1-214ENST00000589890 CATSPERGQ6ZRH7 1159 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 MFSD6Q6ZSS7 791 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 SPICE1Q8N0Z3 855 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 ANKRD13CQ8N6S4 541 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 NKX2-3Q8TAU0 364 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 P2RX7Q99572 595 aaKnown RBP13.39□□□□□ -0.27
CDIP1-214ENST00000589890 ARHGAP39Q9C0H5 1083 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 RNF41Q9H4P4 317 aaPredicted RBP13.39□□□□□ -0.27
CDIP1-214ENST00000589890 IL17RBQ9NRM6 502 aa13.39□□□□□ -0.27
CDIP1-214ENST00000589890 WDR46O15213 610 aaKnown RBP13.38□□□□□ -0.27
CDIP1-214ENST00000589890 NMT2O60551 498 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 CDC45O75419 566 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 TTLL1O95922 423 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 CTGFP29279 349 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 GCLCP48506 637 aaPredicted RBP13.38□□□□□ -0.27
CDIP1-214ENST00000589890 FAM110CQ1W6H9 321 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 POTEEQ6S8J3 1075 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 OTOP1Q7RTM1 612 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 MKL1Q969V6 931 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 MCOLN1Q9GZU1 580 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 CLIP2Q9UDT6 1046 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 TRIM17Q9Y577 477 aa13.38□□□□□ -0.27
CDIP1-214ENST00000589890 PEX10O60683 326 aa13.37□□□□□ -0.27
CDIP1-214ENST00000589890 ECM2O94769 699 aaPredicted RBP13.37□□□□□ -0.27
CDIP1-214ENST00000589890 CYP21A2P08686 494 aa13.37□□□□□ -0.27
CDIP1-214ENST00000589890 LRRC47Q8N1G4 583 aaKnown RBP13.37□□□□□ -0.27
CDIP1-214ENST00000589890 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
CDIP1-214ENST00000589890 LSG1Q9H089 658 aaKnown RBP13.37□□□□□ -0.27
CDIP1-214ENST00000589890 TXNRD2Q9NNW7 524 aa13.37□□□□□ -0.27
CDIP1-214ENST00000589890 MORF4L1Q9UBU8 362 aa13.37□□□□□ -0.27
CDIP1-214ENST00000589890 SYNPO2Q9UMS6 1093 aa13.37□□□□□ -0.27
CDIP1-214ENST00000589890 STX8Q9UNK0 236 aa13.37□□□□□ -0.27
CDIP1-214ENST00000589890 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
CDIP1-214ENST00000589890 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
CDIP1-214ENST00000589890 B4E1Z4 1266 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 F5H6K3 240 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 RAD21O60216 631 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 NDUFB10O96000 172 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 NOVP48745 357 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 KLRC3Q07444 240 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 KIF22Q14807 665 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 LBX2Q6XYB7 198 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 KIAA1211Q6ZU35 1233 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 ESR2Q92731 530 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 TRIM47Q96LD4 638 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 NUP88Q99567 741 aaPredicted RBP13.36□□□□□ -0.27
CDIP1-214ENST00000589890 EFCC1Q9HA90 598 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 RBM8AQ9Y5S9 174 aaKnown RBP13.36□□□□□ -0.27
CDIP1-214ENST00000589890 TAF6LQ9Y6J9 622 aa13.36□□□□□ -0.27
CDIP1-214ENST00000589890 COL11A1P12107 1806 aaPredicted RBP13.36□□□□□ -0.27
CDIP1-214ENST00000589890 KDM4AO75164 1064 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 PSMC4P43686 418 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 COG2Q14746 738 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 PKN2Q16513 984 aaKnown RBP13.35□□□□□ -0.27
CDIP1-214ENST00000589890 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 FAM83BQ5T0W9 1011 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 CASC1Q6TDU7 716 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 GMCL1P1Q8NEA9 526 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 GTF3C2Q8WUA4 911 aaPredicted RBP13.35□□□□□ -0.27
CDIP1-214ENST00000589890 PAGR1Q9BTK6 254 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 ANO2Q9NQ90 1003 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 TCP11L1Q9NUJ3 509 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 CENPFP49454 3210 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 MYPNQ86TC9 1320 aa13.35□□□□□ -0.27
CDIP1-214ENST00000589890 CNMDO75829 334 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 FLOT1O75955 427 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 NT5C2P49902 561 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 FCGRTP55899 365 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 ERVK-9P63128 1117 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 ERVK-24P63145 666 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 ARHGEF6Q15052 776 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 RCSD1Q6JBY9 416 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 FBXO46Q6PJ61 603 aaPredicted RBP13.34□□□□□ -0.27
CDIP1-214ENST00000589890 ZKSCAN3Q9BRR0 538 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 KRT23Q9C075 422 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 CNNM2Q9H8M5 875 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 FBXO28Q9NVF7 368 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 BTBD7Q9P203 1132 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 PTPN22Q9Y2R2 807 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 PLXNB2O15031 1838 aa13.34□□□□□ -0.27
CDIP1-214ENST00000589890 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.28
CDIP1-214ENST00000589890 GNRH1P01148 92 aa13.33□□□□□ -0.28
CDIP1-214ENST00000589890 DSG3P32926 999 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms