RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 USP17L17D6RBQ6 530 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 USP17L19D6RCP7 530 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 USP17L20D6RJB6 530 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 RGS2P41220 211 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 USP17L24Q0WX57 530 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 RAB3GAP1Q15042 981 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 ABCB5Q2M3G0 1257 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 MCMDC2Q4G0Z9 681 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 PAGR1Q9BTK6 254 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 NBPF3Q9H094 633 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 TXNRD2Q9NNW7 524 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 POLR3DP05423 398 aaPredicted RBP23.13■■□□□ 1.29
PTBP1-215ENST00000589883 ZKSCAN1P17029 563 aaPredicted RBP23.13■■□□□ 1.29
PTBP1-215ENST00000589883 SHROOM1Q2M3G4 852 aaPredicted RBP23.13■■□□□ 1.29
PTBP1-215ENST00000589883 ZNF589Q86UQ0 364 aaPredicted RBP23.13■■□□□ 1.29
PTBP1-215ENST00000589883 TRIB2Q92519 343 aa23.13■■□□□ 1.29
PTBP1-215ENST00000589883 DCP1AQ9NPI6 582 aaPredicted RBP23.13■■□□□ 1.29
PTBP1-215ENST00000589883 RABGAP1Q9Y3P9 1069 aa23.13■■□□□ 1.29
PTBP1-215ENST00000589883 CHMLP26374 656 aa23.12■■□□□ 1.29
PTBP1-215ENST00000589883 PLEKHH3Q7Z736 793 aa23.12■■□□□ 1.29
PTBP1-215ENST00000589883 KIAA1683Q9H0B3 1180 aa23.12■■□□□ 1.29
PTBP1-215ENST00000589883 APPP05067 770 aa23.11■■□□□ 1.29
PTBP1-215ENST00000589883 PRKAR2AP13861 404 aaKnown RBP23.11■■□□□ 1.29
PTBP1-215ENST00000589883 MAP3K21Q5TCX8 1036 aa23.11■■□□□ 1.29
PTBP1-215ENST00000589883 GPR142Q7Z601 462 aa23.11■■□□□ 1.29
PTBP1-215ENST00000589883 PRO3102Q9H379 93 aa23.11■■□□□ 1.29
PTBP1-215ENST00000589883 ATP8A2Q9NTI2 1148 aa23.11■■□□□ 1.29
PTBP1-215ENST00000589883 MCM9Q9NXL9 1143 aa23.11■■□□□ 1.29
PTBP1-215ENST00000589883 PLXNB2O15031 1838 aa23.1■■□□□ 1.29
PTBP1-215ENST00000589883 GSG1L2A8MUP6 293 aa23.1■■□□□ 1.29
PTBP1-215ENST00000589883 GNAT2P19087 354 aa23.1■■□□□ 1.29
PTBP1-215ENST00000589883 TRIM32Q13049 653 aa23.1■■□□□ 1.29
PTBP1-215ENST00000589883 ZYXQ15942 572 aaKnown RBP23.1■■□□□ 1.29
PTBP1-215ENST00000589883 Q3C1V9 767 aa23.1■■□□□ 1.29
PTBP1-215ENST00000589883 DDRGK1Q96HY6 314 aa23.1■■□□□ 1.29
PTBP1-215ENST00000589883 APBA2Q99767 749 aa23.1■■□□□ 1.29
PTBP1-215ENST00000589883 OGDHLQ9ULD0 1010 aa23.1■■□□□ 1.29
PTBP1-215ENST00000589883 CCDC171Q6TFL3 1326 aa23.09■■□□□ 1.29
PTBP1-215ENST00000589883 CYP2D6P10635 497 aa23.09■■□□□ 1.29
PTBP1-215ENST00000589883 VPS53Q5VIR6 699 aa23.09■■□□□ 1.29
PTBP1-215ENST00000589883 CATSPERGQ6ZRH7 1159 aa23.09■■□□□ 1.29
PTBP1-215ENST00000589883 DIS3LQ8TF46 1054 aaKnown RBP23.09■■□□□ 1.29
PTBP1-215ENST00000589883 PORCNQ9H237 461 aa23.09■■□□□ 1.29
PTBP1-215ENST00000589883 IL25Q9H293 177 aa23.09■■□□□ 1.29
PTBP1-215ENST00000589883 C11orf49Q9H6J7 331 aa23.09■■□□□ 1.29
PTBP1-215ENST00000589883 EPB41L4AQ9HCS5 686 aaPredicted RBP23.09■■□□□ 1.29
PTBP1-215ENST00000589883 PATL2C9JE40 543 aaKnown RBP23.08■■□□□ 1.29
PTBP1-215ENST00000589883 VCAM1P19320 739 aa23.08■■□□□ 1.29
PTBP1-215ENST00000589883 PLCD1P51178 756 aa23.08■■□□□ 1.29
PTBP1-215ENST00000589883 EVX2Q03828 476 aa23.08■■□□□ 1.29
PTBP1-215ENST00000589883 MORN1Q5T089 497 aa23.08■■□□□ 1.29
PTBP1-215ENST00000589883 USP6NLQ92738 828 aa23.08■■□□□ 1.29
PTBP1-215ENST00000589883 NAV1Q8NEY1 1877 aa23.08■■□□□ 1.29
PTBP1-215ENST00000589883 CYP2D7A0A087X1C5 515 aa23.07■■□□□ 1.28
PTBP1-215ENST00000589883 PEX10O60683 326 aa23.07■■□□□ 1.28
PTBP1-215ENST00000589883 SHMT1P34896 483 aa23.07■■□□□ 1.28
PTBP1-215ENST00000589883 TDO2P48775 406 aa23.07■■□□□ 1.28
PTBP1-215ENST00000589883 MAP2K5Q13163 448 aa23.07■■□□□ 1.28
PTBP1-215ENST00000589883 LBX2Q6XYB7 198 aa23.07■■□□□ 1.28
PTBP1-215ENST00000589883 RUFY2Q8WXA3 655 aa23.07■■□□□ 1.28
PTBP1-215ENST00000589883 IVNS1ABPQ9Y6Y0 642 aa23.07■■□□□ 1.28
PTBP1-215ENST00000589883 USP17L12C9JPN9 530 aa23.06■■□□□ 1.28
PTBP1-215ENST00000589883 USP17L21D6R901 530 aa23.06■■□□□ 1.28
PTBP1-215ENST00000589883 FOXP2O15409 715 aa23.06■■□□□ 1.28
PTBP1-215ENST00000589883 CDC45O75419 566 aa23.06■■□□□ 1.28
PTBP1-215ENST00000589883 MFAP1P55081 439 aaKnown RBP23.06■■□□□ 1.28
PTBP1-215ENST00000589883 WDR78Q5VTH9 848 aa23.06■■□□□ 1.28
PTBP1-215ENST00000589883 MFSD14CQ5VZR4 134 aa23.06■■□□□ 1.28
PTBP1-215ENST00000589883 IFNL3Q8IZI9 196 aa23.06■■□□□ 1.28
PTBP1-215ENST00000589883 NACAP1Q9BZK3 213 aa23.06■■□□□ 1.28
PTBP1-215ENST00000589883 RANBP2P49792 3224 aaKnown RBP23.05■■□□□ 1.28
PTBP1-215ENST00000589883 SLC15A5A6NIM6 579 aa23.05■■□□□ 1.28
PTBP1-215ENST00000589883 MPHOSPH10O00566 681 aaKnown RBP23.05■■□□□ 1.28
PTBP1-215ENST00000589883 GABPAQ06546 454 aa23.05■■□□□ 1.28
PTBP1-215ENST00000589883 CACNB2Q08289 660 aaPredicted RBP23.05■■□□□ 1.28
PTBP1-215ENST00000589883 GIMAP6Q6P9H5 292 aa23.05■■□□□ 1.28
PTBP1-215ENST00000589883 CTR9Q6PD62 1173 aa23.05■■□□□ 1.28
PTBP1-215ENST00000589883 AMOTL1Q8IY63 956 aa23.05■■□□□ 1.28
PTBP1-215ENST00000589883 C7orf61Q8IZ16 206 aa23.05■■□□□ 1.28
PTBP1-215ENST00000589883 ACER1Q8TDN7 264 aa23.05■■□□□ 1.28
PTBP1-215ENST00000589883 SWAP70Q9UH65 585 aa23.05■■□□□ 1.28
PTBP1-215ENST00000589883 RAD50Q92878 1312 aa23.05■■□□□ 1.28
PTBP1-215ENST00000589883 DDX60LQ5H9U9 1706 aaKnown RBP23.05■■□□□ 1.28
PTBP1-215ENST00000589883 SMIM22K7EJ46 135 aa23.04■■□□□ 1.28
PTBP1-215ENST00000589883 HSPD1P10809 573 aaKnown RBP23.04■■□□□ 1.28
PTBP1-215ENST00000589883 NAPBQ9H115 298 aa23.04■■□□□ 1.28
PTBP1-215ENST00000589883 RPAP3Q9H6T3 665 aaPredicted RBP23.04■■□□□ 1.28
PTBP1-215ENST00000589883 HOXC10Q9NYD6 342 aa23.04■■□□□ 1.28
PTBP1-215ENST00000589883 MINDY4BA8MYZ0 360 aa23.03■■□□□ 1.28
PTBP1-215ENST00000589883 PTPREP23469 700 aa23.03■■□□□ 1.28
PTBP1-215ENST00000589883 BMP8BP34820 402 aa23.03■■□□□ 1.28
PTBP1-215ENST00000589883 SEPT2Q15019 361 aa23.03■■□□□ 1.28
PTBP1-215ENST00000589883 C12orf60Q5U649 245 aa23.03■■□□□ 1.28
PTBP1-215ENST00000589883 TMEM179Q6ZVK1 233 aa23.03■■□□□ 1.28
PTBP1-215ENST00000589883 ARPP21Q9UBL0 812 aaPredicted RBP23.03■■□□□ 1.28
PTBP1-215ENST00000589883 BAZ2AQ9UIF9 1905 aaKnown RBP23.02■■□□□ 1.28
PTBP1-215ENST00000589883 SGSM2O43147 1006 aa23.02■■□□□ 1.28
PTBP1-215ENST00000589883 MSCO60682 206 aa23.02■■□□□ 1.28
PTBP1-215ENST00000589883 CNMDO75829 334 aa23.02■■□□□ 1.28
PTBP1-215ENST00000589883 MNX1P50219 401 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms