RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 TIGD1Q96MW7 591 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 AIFM3Q96NN9 605 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 ZKSCAN3Q9BRR0 538 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 NAT10Q9H0A0 1025 aaKnown RBP11.47□□□□□ -0.57
VPS25-202ENST00000589219 WBP1LQ9NX94 342 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 AATFQ9NY61 560 aaKnown RBP eCLIP11.47□□□□□ -0.57
VPS25-202ENST00000589219 PGAP2Q9UHJ9 254 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 DDX60LQ5H9U9 1706 aaKnown RBP11.46□□□□□ -0.57
VPS25-202ENST00000589219 MROH7-TTC4A0A0A0MT08 1334 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 WTIPA6NIX2 430 aaPredicted RBP11.46□□□□□ -0.57
VPS25-202ENST00000589219 YDJCA8MPS7 323 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 USP17L12C9JPN9 530 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 USP17L21D6R901 530 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 G3V3G9 751 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 RIMBP2O15034 1052 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 CUTAO60888 179 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 BAG3O95817 575 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 RPS12P25398 132 aaKnown RBP11.46□□□□□ -0.57
VPS25-202ENST00000589219 CDC25BP30305 580 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 GPSM2P81274 684 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 PTPAQ15257 358 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 RILPL1Q5EBL4 403 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 AXDND1Q5T1B0 1012 aaPredicted RBP11.46□□□□□ -0.57
VPS25-202ENST00000589219 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 SARM1Q6SZW1 724 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
VPS25-202ENST00000589219 DIS3L2Q8IYB7 885 aaKnown RBP11.46□□□□□ -0.57
VPS25-202ENST00000589219 NUP133Q8WUM0 1156 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 ZC3H12CQ9C0D7 883 aaKnown RBP11.46□□□□□ -0.57
VPS25-202ENST00000589219 DNAJC25Q9H1X3 360 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.46□□□□□ -0.57
VPS25-202ENST00000589219 PODXL2Q9NZ53 605 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
VPS25-202ENST00000589219 POLLQ9UGP5 575 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 GGA1Q9UJY5 639 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 CEP131Q9UPN4 1083 aa11.46□□□□□ -0.57
VPS25-202ENST00000589219 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
VPS25-202ENST00000589219 GOLGA6L19H0YKK7 550 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 TRAF5O00463 557 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 PSMD14O00487 310 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 PRPF3O43395 683 aaKnown RBP11.45□□□□□ -0.58
VPS25-202ENST00000589219 ECE2O60344 883 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 UFL1O94874 794 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 PFKFB1P16118 471 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 NDUFA8P51970 172 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 PPP4CP60510 307 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 ZRSR1Q15695 479 aaKnown RBP11.45□□□□□ -0.58
VPS25-202ENST00000589219 CST9Q5W186 159 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 TMTC3Q6ZXV5 915 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 LUZP1Q86V48 1076 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 SLF2Q8IX21 1173 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 MICALL2Q8IY33 904 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 TBC1D16Q8TBP0 767 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 CAPNS2Q96L46 248 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 MAP3K14Q99558 947 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 BPIFA3Q9BQP9 254 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 DBNDD1Q9H9R9 158 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 BRMS1Q9HCU9 246 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 GJB4Q9NTQ9 266 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 TLL2Q9Y6L7 1015 aa11.45□□□□□ -0.58
VPS25-202ENST00000589219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.45□□□□□ -0.58
VPS25-202ENST00000589219 CNTNAP5Q8WYK1 1306 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 A0A1B0GVL5 298 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 OFD1O75665 1012 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 CELF2O95319 508 aaKnown RBP11.44□□□□□ -0.58
VPS25-202ENST00000589219 BMP15O95972 392 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 IL1R1P14778 569 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 PLCG2P16885 1265 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 USP5P45974 858 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 FMR1Q06787 632 aaKnown RBP eCLIP11.44□□□□□ -0.58
VPS25-202ENST00000589219 RESP18Q5W5W9 173 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 TXNRD3Q86VQ6 643 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 PLA2G4DQ86XP0 818 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 ELOA2Q8IYF1 753 aaPredicted RBP11.44□□□□□ -0.58
VPS25-202ENST00000589219 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
VPS25-202ENST00000589219 CTCFLQ8NI51 663 aaPredicted RBP11.44□□□□□ -0.58
VPS25-202ENST00000589219 TBC1D22AQ8WUA7 517 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 HHIPL1Q96JK4 782 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 GPR101Q96P66 508 aaPredicted RBP11.44□□□□□ -0.58
VPS25-202ENST00000589219 SDF4Q9BRK5 362 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 GLIS2Q9BZE0 524 aaPredicted RBP11.44□□□□□ -0.58
VPS25-202ENST00000589219 HPSEQ9Y251 543 aa11.44□□□□□ -0.58
VPS25-202ENST00000589219 POLR2AP24928 1970 aaKnown RBP11.43□□□□□ -0.58
VPS25-202ENST00000589219 BAZ2AQ9UIF9 1905 aaKnown RBP11.43□□□□□ -0.58
VPS25-202ENST00000589219 THSD7BQ9C0I4 1608 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 CYP2D7A0A087X1C5 515 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 BECN2A8MW95 431 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 KIF5BP33176 963 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 KRT2P35908 639 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 MAP2K2P36507 400 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 SYKP43405 635 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 ZNF75DP51815 510 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 HIRAP54198 1017 aaPredicted RBP11.43□□□□□ -0.58
VPS25-202ENST00000589219 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 FUT2Q10981 343 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 TROAPQ12815 778 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 IQCB1Q15051 598 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 C12orf60Q5U649 245 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms