RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 BMP6P22004 513 aa10.27□□□□□ -0.77
ATG4D-210ENST00000588972 HSD3B2P26439 372 aa10.27□□□□□ -0.77
ATG4D-210ENST00000588972 PPP2R3AQ06190 1150 aa10.27□□□□□ -0.77
ATG4D-210ENST00000588972 RASA3Q14644 834 aa10.27□□□□□ -0.77
ATG4D-210ENST00000588972 POLR3GLQ9BT43 218 aa10.27□□□□□ -0.77
ATG4D-210ENST00000588972 MIR1-1HGQ9H1L0 117 aa10.27□□□□□ -0.77
ATG4D-210ENST00000588972 IGFLR1Q9H665 355 aa10.27□□□□□ -0.77
ATG4D-210ENST00000588972 LY75O60449 1722 aa10.27□□□□□ -0.77
ATG4D-210ENST00000588972 RGS20O76081 388 aa10.26□□□□□ -0.77
ATG4D-210ENST00000588972 LMNB1P20700 586 aa10.26□□□□□ -0.77
ATG4D-210ENST00000588972 MPP2Q14168 576 aa10.26□□□□□ -0.77
ATG4D-210ENST00000588972 FAM169BQ8N8A8 192 aa10.26□□□□□ -0.77
ATG4D-210ENST00000588972 BSNDQ8WZ55 320 aa10.26□□□□□ -0.77
ATG4D-210ENST00000588972 JARID2Q92833 1246 aaPredicted RBP10.26□□□□□ -0.77
ATG4D-210ENST00000588972 PLD4Q96BZ4 506 aa10.26□□□□□ -0.77
ATG4D-210ENST00000588972 DEPDC7Q96QD5 511 aa10.26□□□□□ -0.77
ATG4D-210ENST00000588972 TFCP2L1Q9NZI6 479 aa10.26□□□□□ -0.77
ATG4D-210ENST00000588972 PHF24Q9UPV7 400 aa10.26□□□□□ -0.77
ATG4D-210ENST00000588972 R3HCC1Q9Y3T6 440 aaKnown RBP10.26□□□□□ -0.77
ATG4D-210ENST00000588972 SAMM50Q9Y512 469 aa10.26□□□□□ -0.77
ATG4D-210ENST00000588972 FAM221BA6H8Z2 402 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 GRIN3BO60391 1043 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 SMNDC1O75940 238 aaKnown RBP eCLIP10.25□□□□□ -0.77
ATG4D-210ENST00000588972 B3GALT4O96024 378 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 EIF2AK2P19525 551 aaKnown RBP10.25□□□□□ -0.77
ATG4D-210ENST00000588972 NME2P22392 152 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 ITGA6P23229 1130 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 EIF6P56537 245 aaKnown RBP10.25□□□□□ -0.77
ATG4D-210ENST00000588972 CTBSQ01459 385 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 PCDH1Q08174 1060 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 SEPT6Q14141 434 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 PCSK7Q16549 785 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 TNNI3KQ59H18 835 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 CEP135Q66GS9 1140 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 HDGFL2Q7Z4V5 671 aaPredicted RBP10.25□□□□□ -0.77
ATG4D-210ENST00000588972 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.25□□□□□ -0.77
ATG4D-210ENST00000588972 NLGN2Q8NFZ4 835 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 RNPC3Q96LT9 517 aaKnown RBP10.25□□□□□ -0.77
ATG4D-210ENST00000588972 UBE2OQ9C0C9 1292 aaKnown RBP10.25□□□□□ -0.77
ATG4D-210ENST00000588972 RBSNQ9H1K0 784 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 KIF20BQ96Q89 1820 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 ANKRD36BQ8N2N9 1353 aa10.25□□□□□ -0.77
ATG4D-210ENST00000588972 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
ATG4D-210ENST00000588972 ENPP3O14638 875 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 ST8SIA5O15466 376 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 CILPO75339 1184 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 GIPRP48546 466 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 ZNF423Q2M1K9 1284 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 ADAMTSL4Q6UY14 1074 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 LRP10Q7Z4F1 713 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 SYT9Q86SS6 491 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 TERF2IPQ9NYB0 399 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 SOX13Q9UN79 622 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 NSD2O96028 1365 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 ATP10DQ9P241 1426 aa10.24□□□□□ -0.77
ATG4D-210ENST00000588972 MCM4P33991 863 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 ZNF165P49910 485 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 TBC1D8BQ0IIM8 1120 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 CWF19L2Q2TBE0 894 aaKnown RBP10.23□□□□□ -0.77
ATG4D-210ENST00000588972 KANK3Q6NY19 840 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 VN1R5Q7Z5H4 357 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 NME9Q86XW9 330 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 STK35Q8TDR2 534 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 AAASQ9NRG9 546 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 DACH1Q9UI36 760 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 PRR12Q9ULL5 1215 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 CYP8B1Q9UNU6 501 aa10.23□□□□□ -0.77
ATG4D-210ENST00000588972 C5P01031 1676 aa10.22□□□□□ -0.77
ATG4D-210ENST00000588972 YBX3P16989 372 aaKnown RBP eCLIP10.22□□□□□ -0.77
ATG4D-210ENST00000588972 REC114Q7Z4M0 266 aa10.22□□□□□ -0.77
ATG4D-210ENST00000588972 SULF2Q8IWU5 870 aa10.22□□□□□ -0.77
ATG4D-210ENST00000588972 REXO1Q8N1G1 1221 aaKnown RBP10.22□□□□□ -0.77
ATG4D-210ENST00000588972 CELF2-AS1Q8N7Q2 184 aa10.22□□□□□ -0.77
ATG4D-210ENST00000588972 DDX54Q8TDD1 881 aaKnown RBP10.22□□□□□ -0.77
ATG4D-210ENST00000588972 SYTL4Q96C24 671 aaPredicted RBP10.22□□□□□ -0.77
ATG4D-210ENST00000588972 FERD3LQ96RJ6 166 aa10.22□□□□□ -0.77
ATG4D-210ENST00000588972 BRMS1Q9HCU9 246 aa10.22□□□□□ -0.77
ATG4D-210ENST00000588972 MSRB2Q9Y3D2 182 aa10.22□□□□□ -0.77
ATG4D-210ENST00000588972 CCDC85CA6NKD9 419 aa10.21□□□□□ -0.77
ATG4D-210ENST00000588972 NRG2O14511 850 aaPredicted RBP10.21□□□□□ -0.77
ATG4D-210ENST00000588972 CLSTN1O94985 981 aa10.21□□□□□ -0.77
ATG4D-210ENST00000588972 LRRC14Q15048 493 aa10.21□□□□□ -0.77
ATG4D-210ENST00000588972 ZNF468Q5VIY5 522 aaPredicted RBP10.21□□□□□ -0.77
ATG4D-210ENST00000588972 FBXW10Q5XX13 1052 aa10.21□□□□□ -0.77
ATG4D-210ENST00000588972 LLGL2Q6P1M3 1020 aa10.21□□□□□ -0.77
ATG4D-210ENST00000588972 GRIN3AQ8TCU5 1115 aa10.21□□□□□ -0.77
ATG4D-210ENST00000588972 GAL3ST3Q96A11 431 aa10.21□□□□□ -0.77
ATG4D-210ENST00000588972 GPATCH3Q96I76 525 aa10.21□□□□□ -0.77
ATG4D-210ENST00000588972 CCNL1Q9UK58 526 aaPredicted RBP10.21□□□□□ -0.77
ATG4D-210ENST00000588972 KIF7Q2M1P5 1343 aa10.21□□□□□ -0.78
ATG4D-210ENST00000588972 ADCY9O60503 1353 aa10.21□□□□□ -0.78
ATG4D-210ENST00000588972 MEGF6O75095 1541 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 SIN3BO75182 1162 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 CPB1P15086 417 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 PTPRAP18433 802 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 ARNTP27540 789 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 FAM35AQ86V20 835 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 IP6K1Q92551 441 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 CRBNQ96SW2 442 aa10.2□□□□□ -0.78
ATG4D-210ENST00000588972 NSD3Q9BZ95 1437 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms